RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 SYNMO15061 1565 aa9.63□□□□□ -0.87
PSEN1-214ENST00000555867 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
PSEN1-214ENST00000555867 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
PSEN1-214ENST00000555867 PZPP20742 1482 aa9.62□□□□□ -0.87
PSEN1-214ENST00000555867 CCDC18Q5T9S5 1454 aa9.62□□□□□ -0.87
PSEN1-214ENST00000555867 SOX12O15370 315 aa9.62□□□□□ -0.87
PSEN1-214ENST00000555867 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
PSEN1-214ENST00000555867 ERBB3P21860 1342 aa9.61□□□□□ -0.87
PSEN1-214ENST00000555867 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
PSEN1-214ENST00000555867 MICALL2Q8IY33 904 aa9.61□□□□□ -0.87
PSEN1-214ENST00000555867 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
PSEN1-214ENST00000555867 NLRP1Q9C000 1473 aa9.6□□□□□ -0.87
PSEN1-214ENST00000555867 KIAA1107Q9UPP5 1409 aa9.6□□□□□ -0.87
PSEN1-214ENST00000555867 KIF3BO15066 747 aa9.6□□□□□ -0.87
PSEN1-214ENST00000555867 ZC3H13Q5T200 1668 aaKnown RBP9.6□□□□□ -0.87
PSEN1-214ENST00000555867 EHBP1L1Q8N3D4 1523 aa9.6□□□□□ -0.87
PSEN1-214ENST00000555867 LTKP29376 864 aa9.59□□□□□ -0.87
PSEN1-214ENST00000555867 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-214ENST00000555867 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
PSEN1-214ENST00000555867 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-214ENST00000555867 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
PSEN1-214ENST00000555867 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-214ENST00000555867 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
PSEN1-214ENST00000555867 DHX29Q7Z478 1369 aaKnown RBP9.58□□□□□ -0.88
PSEN1-214ENST00000555867 CFAP65Q6ZU64 1925 aaKnown RBP9.58□□□□□ -0.88
PSEN1-214ENST00000555867 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
PSEN1-214ENST00000555867 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
PSEN1-214ENST00000555867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-214ENST00000555867 RNF25Q96BH1 459 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-214ENST00000555867 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-214ENST00000555867 CFDP1Q9UEE9 299 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-214ENST00000555867 LRP6O75581 1613 aa9.56□□□□□ -0.88
PSEN1-214ENST00000555867 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
PSEN1-214ENST00000555867 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
PSEN1-214ENST00000555867 JCADQ9P266 1359 aa9.55□□□□□ -0.88
PSEN1-214ENST00000555867 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
PSEN1-214ENST00000555867 KDM5DQ9BY66 1539 aa9.55□□□□□ -0.88
PSEN1-214ENST00000555867 SCAF11Q99590 1463 aaKnown RBP9.54□□□□□ -0.88
PSEN1-214ENST00000555867 MBD5Q9P267 1494 aa9.54□□□□□ -0.88
PSEN1-214ENST00000555867 RXRBP28702 533 aa9.54□□□□□ -0.88
PSEN1-214ENST00000555867 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
PSEN1-214ENST00000555867 ZNF772Q68DY9 489 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-214ENST00000555867 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
PSEN1-214ENST00000555867 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
PSEN1-214ENST00000555867 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
PSEN1-214ENST00000555867 PLEKHH2Q8IVE3 1493 aa9.53□□□□□ -0.88
PSEN1-214ENST00000555867 MTUS2Q5JR59 1369 aa9.53□□□□□ -0.88
PSEN1-214ENST00000555867 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.89
PSEN1-214ENST00000555867 PHLPP1O60346 1717 aa9.52□□□□□ -0.89
PSEN1-214ENST00000555867 KCNA6P17658 529 aa9.51□□□□□ -0.89
PSEN1-214ENST00000555867 PROSER2Q86WR7 435 aaPredicted RBP9.51□□□□□ -0.89
PSEN1-214ENST00000555867 SLAIN2Q9P270 581 aa9.51□□□□□ -0.89
PSEN1-214ENST00000555867 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
PSEN1-214ENST00000555867 ARHGAP23Q9P227 1491 aa9.51□□□□□ -0.89
PSEN1-214ENST00000555867 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
PSEN1-214ENST00000555867 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
PSEN1-214ENST00000555867 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
PSEN1-214ENST00000555867 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
PSEN1-214ENST00000555867 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
PSEN1-214ENST00000555867 ERVK-7P63135 1459 aa9.5□□□□□ -0.89
PSEN1-214ENST00000555867 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
PSEN1-214ENST00000555867 COL16A1Q07092 1604 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-214ENST00000555867 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
PSEN1-214ENST00000555867 NLRP6P59044 892 aa9.49□□□□□ -0.89
PSEN1-214ENST00000555867 SPATA31A6Q5VVP1 1343 aa9.49□□□□□ -0.89
PSEN1-214ENST00000555867 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
PSEN1-214ENST00000555867 CDK12Q9NYV4 1490 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-214ENST00000555867 SLIT1O75093 1534 aa9.48□□□□□ -0.89
PSEN1-214ENST00000555867 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-214ENST00000555867 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
PSEN1-214ENST00000555867 SETBP1Q9Y6X0 1596 aa9.48□□□□□ -0.89
PSEN1-214ENST00000555867 ABCC3O15438 1527 aa9.47□□□□□ -0.89
PSEN1-214ENST00000555867 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
PSEN1-214ENST00000555867 EID1Q9Y6B2 187 aa9.46□□□□□ -0.9
PSEN1-214ENST00000555867 AFF2P51816 1311 aa9.46□□□□□ -0.9
PSEN1-214ENST00000555867 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
PSEN1-214ENST00000555867 RGS12O14924 1447 aa9.46□□□□□ -0.9
PSEN1-214ENST00000555867 PRDM15P57071 1507 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-214ENST00000555867 NUTM2BA6NNL0 878 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-214ENST00000555867 NUTM2EB1AL46 878 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-214ENST00000555867 NUTM2AQ8IVF1 878 aaPredicted RBP9.45□□□□□ -0.9
PSEN1-214ENST00000555867 MSH6P52701 1360 aa9.45□□□□□ -0.9
PSEN1-214ENST00000555867 GCC2Q8IWJ2 1684 aa9.45□□□□□ -0.9
PSEN1-214ENST00000555867 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-214ENST00000555867 BCL11BQ9C0K0 894 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-214ENST00000555867 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
PSEN1-214ENST00000555867 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
PSEN1-214ENST00000555867 TET3O43151 1660 aa9.43□□□□□ -0.9
PSEN1-214ENST00000555867 PTGER2P43116 358 aa9.43□□□□□ -0.9
PSEN1-214ENST00000555867 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
PSEN1-214ENST00000555867 FBXO22Q8NEZ5 403 aa9.43□□□□□ -0.9
PSEN1-214ENST00000555867 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
PSEN1-214ENST00000555867 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
PSEN1-214ENST00000555867 FAM50AQ14320 339 aaKnown RBP9.42□□□□□ -0.9
PSEN1-214ENST00000555867 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
PSEN1-214ENST00000555867 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
PSEN1-214ENST00000555867 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
PSEN1-214ENST00000555867 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-214ENST00000555867 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
PSEN1-214ENST00000555867 MROH1Q8NDA8 1641 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms