RNA–Protein interactions for RNA: ENST00000555839.5

APEX1-211, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-211ENST00000555839 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
APEX1-211ENST00000555839 PRAM1Q96QH2 718 aa19.08■□□□□ 0.64
APEX1-211ENST00000555839 C1orf167Q5SNV9 1468 aa19.07■□□□□ 0.64
APEX1-211ENST00000555839 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
APEX1-211ENST00000555839 PHLPP1O60346 1717 aa19.06■□□□□ 0.64
APEX1-211ENST00000555839 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
APEX1-211ENST00000555839 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
APEX1-211ENST00000555839 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
APEX1-211ENST00000555839 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
APEX1-211ENST00000555839 ESCO1Q5FWF5 840 aa19.03■□□□□ 0.64
APEX1-211ENST00000555839 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
APEX1-211ENST00000555839 JCADQ9P266 1359 aa19.03■□□□□ 0.64
APEX1-211ENST00000555839 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
APEX1-211ENST00000555839 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
APEX1-211ENST00000555839 LRRC59Q96AG4 307 aaKnown RBP19.01■□□□□ 0.63
APEX1-211ENST00000555839 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
APEX1-211ENST00000555839 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
APEX1-211ENST00000555839 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
APEX1-211ENST00000555839 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
APEX1-211ENST00000555839 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
APEX1-211ENST00000555839 SPATA31A6Q5VVP1 1343 aa18.97■□□□□ 0.63
APEX1-211ENST00000555839 MINK1Q8N4C8 1332 aaPredicted RBP18.97■□□□□ 0.63
APEX1-211ENST00000555839 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
APEX1-211ENST00000555839 HIRIP3Q9BW71 556 aaPredicted RBP18.96■□□□□ 0.63
APEX1-211ENST00000555839 NPHP3Q7Z494 1330 aa18.96■□□□□ 0.63
APEX1-211ENST00000555839 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
APEX1-211ENST00000555839 FOXO3O43524 673 aa18.95■□□□□ 0.62
APEX1-211ENST00000555839 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
APEX1-211ENST00000555839 FMN2Q9NZ56 1722 aa18.94■□□□□ 0.62
APEX1-211ENST00000555839 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
APEX1-211ENST00000555839 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
APEX1-211ENST00000555839 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
APEX1-211ENST00000555839 ADGRB2O60241 1585 aa18.9■□□□□ 0.62
APEX1-211ENST00000555839 NBPF8Q3BBV2 869 aa18.9■□□□□ 0.62
APEX1-211ENST00000555839 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
APEX1-211ENST00000555839 ROCK2O75116 1388 aaKnown RBP18.9■□□□□ 0.62
APEX1-211ENST00000555839 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
APEX1-211ENST00000555839 SHPRHQ149N8 1683 aa18.89■□□□□ 0.61
APEX1-211ENST00000555839 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
APEX1-211ENST00000555839 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
APEX1-211ENST00000555839 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
APEX1-211ENST00000555839 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.61
APEX1-211ENST00000555839 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
APEX1-211ENST00000555839 PSME1Q06323 249 aa18.88■□□□□ 0.61
APEX1-211ENST00000555839 CENPJQ9HC77 1338 aaPredicted RBP18.88■□□□□ 0.61
APEX1-211ENST00000555839 PNPLA6Q8IY17 1366 aa18.88■□□□□ 0.61
APEX1-211ENST00000555839 KRT28Q7Z3Y7 464 aa18.87■□□□□ 0.61
APEX1-211ENST00000555839 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
APEX1-211ENST00000555839 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
APEX1-211ENST00000555839 TRPM1Q7Z4N2 1603 aa18.86■□□□□ 0.61
APEX1-211ENST00000555839 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
APEX1-211ENST00000555839 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
APEX1-211ENST00000555839 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
APEX1-211ENST00000555839 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
APEX1-211ENST00000555839 PXDNQ92626 1479 aa18.84■□□□□ 0.61
APEX1-211ENST00000555839 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
APEX1-211ENST00000555839 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
APEX1-211ENST00000555839 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
APEX1-211ENST00000555839 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
APEX1-211ENST00000555839 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
APEX1-211ENST00000555839 LRP6O75581 1613 aa18.82■□□□□ 0.6
APEX1-211ENST00000555839 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
APEX1-211ENST00000555839 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
APEX1-211ENST00000555839 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
APEX1-211ENST00000555839 SRPK2P78362 688 aaKnown RBP18.81■□□□□ 0.6
APEX1-211ENST00000555839 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
APEX1-211ENST00000555839 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
APEX1-211ENST00000555839 CCER1Q8TC90 406 aaPredicted RBP18.8■□□□□ 0.6
APEX1-211ENST00000555839 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
APEX1-211ENST00000555839 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
APEX1-211ENST00000555839 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
APEX1-211ENST00000555839 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
APEX1-211ENST00000555839 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
APEX1-211ENST00000555839 LMOD2Q6P5Q4 547 aa18.77■□□□□ 0.6
APEX1-211ENST00000555839 C8orf37Q96NL8 207 aa18.77■□□□□ 0.6
APEX1-211ENST00000555839 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
APEX1-211ENST00000555839 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
APEX1-211ENST00000555839 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
APEX1-211ENST00000555839 NGLY1Q96IV0 654 aa18.76■□□□□ 0.59
APEX1-211ENST00000555839 ATP7BP35670 1465 aa18.76■□□□□ 0.59
APEX1-211ENST00000555839 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
APEX1-211ENST00000555839 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
APEX1-211ENST00000555839 COL22A1Q8NFW1 1626 aaPredicted RBP18.74■□□□□ 0.59
APEX1-211ENST00000555839 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
APEX1-211ENST00000555839 ITSN1Q15811 1721 aa18.74■□□□□ 0.59
APEX1-211ENST00000555839 AFF2P51816 1311 aa18.74■□□□□ 0.59
APEX1-211ENST00000555839 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
APEX1-211ENST00000555839 HAP1P54257 671 aaPredicted RBP18.73■□□□□ 0.59
APEX1-211ENST00000555839 ACEP12821 1306 aa18.73■□□□□ 0.59
APEX1-211ENST00000555839 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
APEX1-211ENST00000555839 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
APEX1-211ENST00000555839 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
APEX1-211ENST00000555839 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
APEX1-211ENST00000555839 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
APEX1-211ENST00000555839 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
APEX1-211ENST00000555839 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
APEX1-211ENST00000555839 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
APEX1-211ENST00000555839 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
APEX1-211ENST00000555839 RXRBP28702 533 aa18.67■□□□□ 0.58
APEX1-211ENST00000555839 USP21Q9UK80 565 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms