RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CCDC141Q6ZP82 1450 aa8.84□□□□□ -0.99
ATXN3-230ENST00000554673 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
ATXN3-230ENST00000554673 CFDP1Q9UEE9 299 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-230ENST00000554673 KIAA1107Q9UPP5 1409 aa8.84□□□□□ -0.99
ATXN3-230ENST00000554673 FANCAO15360 1455 aa8.83□□□□□ -1
ATXN3-230ENST00000554673 DEPDC5O75140 1603 aa8.83□□□□□ -1
ATXN3-230ENST00000554673 KDM5DQ9BY66 1539 aa8.82□□□□□ -1
ATXN3-230ENST00000554673 ARHGAP33O14559 1287 aa8.82□□□□□ -1
ATXN3-230ENST00000554673 HS6ST3Q8IZP7 471 aa8.82□□□□□ -1
ATXN3-230ENST00000554673 ZNF777Q9ULD5 760 aaPredicted RBP8.82□□□□□ -1
ATXN3-230ENST00000554673 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
ATXN3-230ENST00000554673 MAGI2Q86UL8 1455 aa8.82□□□□□ -1
ATXN3-230ENST00000554673 ATP7AQ04656 1500 aa8.81□□□□□ -1
ATXN3-230ENST00000554673 SLC34A2O95436 690 aa8.81□□□□□ -1
ATXN3-230ENST00000554673 DIP2CQ9Y2E4 1556 aa8.81□□□□□ -1
ATXN3-230ENST00000554673 PLEKHH2Q8IVE3 1493 aa8.8□□□□□ -1
ATXN3-230ENST00000554673 VWDEQ8N2E2 1590 aa8.8□□□□□ -1
ATXN3-230ENST00000554673 BCORL1Q5H9F3 1711 aa8.8□□□□□ -1
ATXN3-230ENST00000554673 CD109Q6YHK3 1445 aa8.8□□□□□ -1
ATXN3-230ENST00000554673 ADGRL1O94910 1474 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 PSEN2P49810 448 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 AFAP1Q8N556 730 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 IQGAP3Q86VI3 1631 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 POGZQ7Z3K3 1410 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 SCAPERQ9BY12 1400 aa8.79□□□□□ -1
ATXN3-230ENST00000554673 E9PCH4 1651 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 CEP152O94986 1710 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 HOMEZQ8IX15 550 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
ATXN3-230ENST00000554673 STAC3Q96MF2 364 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 HECW2Q9P2P5 1572 aa8.78□□□□□ -1
ATXN3-230ENST00000554673 PLA2R1Q13018 1463 aa8.77□□□□□ -1
ATXN3-230ENST00000554673 RNF17Q9BXT8 1623 aaKnown RBP8.77□□□□□ -1.01
ATXN3-230ENST00000554673 ZMYM4Q5VZL5 1548 aa8.77□□□□□ -1.01
ATXN3-230ENST00000554673 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
ATXN3-230ENST00000554673 KIF15Q9NS87 1388 aa8.76□□□□□ -1.01
ATXN3-230ENST00000554673 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-230ENST00000554673 SIN3AQ96ST3 1273 aa8.76□□□□□ -1.01
ATXN3-230ENST00000554673 ANKRD50Q9ULJ7 1429 aa8.76□□□□□ -1.01
ATXN3-230ENST00000554673 NEO1Q92859 1461 aa8.76□□□□□ -1.01
ATXN3-230ENST00000554673 PPP1R37O75864 691 aa8.75□□□□□ -1.01
ATXN3-230ENST00000554673 DUOX2Q9NRD8 1548 aa8.75□□□□□ -1.01
ATXN3-230ENST00000554673 EIF2AK4Q9P2K8 1649 aaKnown RBP8.74□□□□□ -1.01
ATXN3-230ENST00000554673 FAM135AQ9P2D6 1515 aa8.74□□□□□ -1.01
ATXN3-230ENST00000554673 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
ATXN3-230ENST00000554673 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
ATXN3-230ENST00000554673 MLH3Q9UHC1 1453 aa8.73□□□□□ -1.01
ATXN3-230ENST00000554673 EFCAB2Q5VUJ9 269 aa8.73□□□□□ -1.01
ATXN3-230ENST00000554673 CCER1Q8TC90 406 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-230ENST00000554673 PRDM15P57071 1507 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-230ENST00000554673 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
ATXN3-230ENST00000554673 TK2O00142 265 aa8.72□□□□□ -1.01
ATXN3-230ENST00000554673 HRO43593 1189 aa8.72□□□□□ -1.01
ATXN3-230ENST00000554673 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
ATXN3-230ENST00000554673 ANKRD30AQ9BXX3 1397 aa8.72□□□□□ -1.01
ATXN3-230ENST00000554673 MROH2AA6NES4 1674 aa8.72□□□□□ -1.01
ATXN3-230ENST00000554673 RAPGEF3O95398 923 aa8.71□□□□□ -1.02
ATXN3-230ENST00000554673 PTPN5P54829 565 aa8.71□□□□□ -1.02
ATXN3-230ENST00000554673 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-230ENST00000554673 CFAP65Q6ZU64 1925 aaKnown RBP8.71□□□□□ -1.02
ATXN3-230ENST00000554673 TET3O43151 1660 aa8.71□□□□□ -1.02
ATXN3-230ENST00000554673 ZNF518AQ6AHZ1 1483 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 FAM69CQ0P6D2 419 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 C14orf37Q86TY3 774 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 PLPP6Q8IY26 295 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
ATXN3-230ENST00000554673 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 ERBINQ96RT1 1412 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 ARHGEF40Q8TER5 1519 aa8.7□□□□□ -1.02
ATXN3-230ENST00000554673 UGGT1Q9NYU2 1555 aa8.69□□□□□ -1.02
ATXN3-230ENST00000554673 CLTCL1P53675 1640 aa8.69□□□□□ -1.02
ATXN3-230ENST00000554673 SPHKAPQ2M3C7 1700 aa8.69□□□□□ -1.02
ATXN3-230ENST00000554673 MYO5BQ9ULV0 1848 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-230ENST00000554673 MPHOSPH9Q99550 1183 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 ATP10AO60312 1499 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 A2MP01023 1474 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 REREQ9P2R6 1566 aa8.68□□□□□ -1.02
ATXN3-230ENST00000554673 SPAG9O60271 1321 aaKnown RBP8.67□□□□□ -1.02
ATXN3-230ENST00000554673 CAMSAP1Q5T5Y3 1602 aa8.67□□□□□ -1.02
ATXN3-230ENST00000554673 IFT172Q9UG01 1749 aa8.67□□□□□ -1.02
ATXN3-230ENST00000554673 SYNMO15061 1565 aa8.66□□□□□ -1.02
ATXN3-230ENST00000554673 ABCC3O15438 1527 aa8.66□□□□□ -1.02
ATXN3-230ENST00000554673 EFCAB6Q5THR3 1501 aa8.66□□□□□ -1.02
ATXN3-230ENST00000554673 RPRD2Q5VT52 1461 aaKnown RBP8.66□□□□□ -1.02
ATXN3-230ENST00000554673 DHX29Q7Z478 1369 aaKnown RBP8.66□□□□□ -1.02
ATXN3-230ENST00000554673 TBC1D12O60347 775 aa8.66□□□□□ -1.02
ATXN3-230ENST00000554673 LMTK2Q8IWU2 1503 aa8.65□□□□□ -1.02
ATXN3-230ENST00000554673 FOXK1P85037 733 aa8.65□□□□□ -1.02
ATXN3-230ENST00000554673 NUP155O75694 1391 aa8.64□□□□□ -1.03
ATXN3-230ENST00000554673 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
ATXN3-230ENST00000554673 DSG2Q14126 1118 aa8.64□□□□□ -1.03
ATXN3-230ENST00000554673 PIK3C2BO00750 1634 aa8.64□□□□□ -1.03
ATXN3-230ENST00000554673 RSPH4AQ5TD94 716 aa8.63□□□□□ -1.03
ATXN3-230ENST00000554673 PTPRTO14522 1441 aa8.63□□□□□ -1.03
ATXN3-230ENST00000554673 CLTCQ00610 1675 aaKnown RBP8.62□□□□□ -1.03
ATXN3-230ENST00000554673 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms