RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
SHMT2-213ENST00000554600 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
SHMT2-213ENST00000554600 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
SHMT2-213ENST00000554600 C1orf167Q5SNV9 1468 aa15.45■□□□□ 0.06
SHMT2-213ENST00000554600 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
SHMT2-213ENST00000554600 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
SHMT2-213ENST00000554600 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHMT2-213ENST00000554600 POGKQ9P215 609 aa15.44■□□□□ 0.06
SHMT2-213ENST00000554600 JCADQ9P266 1359 aa15.44■□□□□ 0.06
SHMT2-213ENST00000554600 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
SHMT2-213ENST00000554600 KIAA1210Q9ULL0 1709 aa15.43■□□□□ 0.06
SHMT2-213ENST00000554600 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
SHMT2-213ENST00000554600 DDX17Q92841 729 aaKnown RBP15.42■□□□□ 0.06
SHMT2-213ENST00000554600 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
SHMT2-213ENST00000554600 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
SHMT2-213ENST00000554600 TRAK1Q9UPV9 953 aa15.42■□□□□ 0.06
SHMT2-213ENST00000554600 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
SHMT2-213ENST00000554600 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
SHMT2-213ENST00000554600 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
SHMT2-213ENST00000554600 ESCO1Q5FWF5 840 aa15.4■□□□□ 0.06
SHMT2-213ENST00000554600 SIRT1Q96EB6 747 aa15.39■□□□□ 0.05
SHMT2-213ENST00000554600 RGS17Q9UGC6 210 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-213ENST00000554600 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-213ENST00000554600 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-213ENST00000554600 MEX3CQ5U5Q3 659 aaKnown RBP15.37■□□□□ 0.05
SHMT2-213ENST00000554600 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-213ENST00000554600 LRRC59Q96AG4 307 aaKnown RBP15.37■□□□□ 0.05
SHMT2-213ENST00000554600 KIF1AQ12756 1690 aa15.37■□□□□ 0.05
SHMT2-213ENST00000554600 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
SHMT2-213ENST00000554600 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
SHMT2-213ENST00000554600 MINK1Q8N4C8 1332 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-213ENST00000554600 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-213ENST00000554600 ADGRB2O60241 1585 aa15.34■□□□□ 0.05
SHMT2-213ENST00000554600 LRP6O75581 1613 aa15.33■□□□□ 0.04
SHMT2-213ENST00000554600 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
SHMT2-213ENST00000554600 FOXO3O43524 673 aa15.33■□□□□ 0.04
SHMT2-213ENST00000554600 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-213ENST00000554600 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
SHMT2-213ENST00000554600 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
SHMT2-213ENST00000554600 NBPF1Q3BBV0 1214 aa15.32■□□□□ 0.04
SHMT2-213ENST00000554600 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
SHMT2-213ENST00000554600 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-213ENST00000554600 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
SHMT2-213ENST00000554600 QRICH2Q9H0J4 1663 aa15.3■□□□□ 0.04
SHMT2-213ENST00000554600 PXDNQ92626 1479 aa15.29■□□□□ 0.04
SHMT2-213ENST00000554600 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
SHMT2-213ENST00000554600 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
SHMT2-213ENST00000554600 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
SHMT2-213ENST00000554600 MARF1Q9Y4F3 1742 aaKnown RBP15.28■□□□□ 0.04
SHMT2-213ENST00000554600 TULP4Q9NRJ4 1543 aa15.27■□□□□ 0.04
SHMT2-213ENST00000554600 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.04
SHMT2-213ENST00000554600 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-213ENST00000554600 PMFBP1Q8TBY8 1022 aa15.27■□□□□ 0.04
SHMT2-213ENST00000554600 COL22A1Q8NFW1 1626 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-213ENST00000554600 ADAMTS2O95450 1211 aa15.26■□□□□ 0.03
SHMT2-213ENST00000554600 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
SHMT2-213ENST00000554600 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
SHMT2-213ENST00000554600 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
SHMT2-213ENST00000554600 PSME1Q06323 249 aa15.25■□□□□ 0.03
SHMT2-213ENST00000554600 POTEAQ6S8J7 498 aa15.25■□□□□ 0.03
SHMT2-213ENST00000554600 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-213ENST00000554600 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
SHMT2-213ENST00000554600 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
SHMT2-213ENST00000554600 C8orf37Q96NL8 207 aa15.24■□□□□ 0.03
SHMT2-213ENST00000554600 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
SHMT2-213ENST00000554600 PRR36Q9H6K5 1346 aa15.23■□□□□ 0.03
SHMT2-213ENST00000554600 CDK19Q9BWU1 502 aa15.23■□□□□ 0.03
SHMT2-213ENST00000554600 ZNF772Q68DY9 489 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-213ENST00000554600 NGDNQ8NEJ9 315 aaKnown RBP15.22■□□□□ 0.03
SHMT2-213ENST00000554600 NGLY1Q96IV0 654 aa15.22■□□□□ 0.03
SHMT2-213ENST00000554600 AFF2P51816 1311 aa15.21■□□□□ 0.03
SHMT2-213ENST00000554600 SPATA31A3Q5VYP0 1347 aa15.21■□□□□ 0.03
SHMT2-213ENST00000554600 TRPM3Q9HCF6 1732 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-213ENST00000554600 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-213ENST00000554600 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.03
SHMT2-213ENST00000554600 NUDT16Q96DE0 195 aaKnown RBP15.21■□□□□ 0.03
SHMT2-213ENST00000554600 TOPAZ1Q8N9V7 1692 aa15.21■□□□□ 0.03
SHMT2-213ENST00000554600 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.02
SHMT2-213ENST00000554600 ATP7BP35670 1465 aa15.2■□□□□ 0.02
SHMT2-213ENST00000554600 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
SHMT2-213ENST00000554600 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
SHMT2-213ENST00000554600 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
SHMT2-213ENST00000554600 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-213ENST00000554600 ALS2Q96Q42 1657 aa15.18■□□□□ 0.02
SHMT2-213ENST00000554600 SBNO1A3KN83 1393 aa15.17■□□□□ 0.02
SHMT2-213ENST00000554600 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
SHMT2-213ENST00000554600 RALGAPBQ86X10 1494 aa15.16■□□□□ 0.02
SHMT2-213ENST00000554600 ARHGEF10O15013 1369 aa15.16■□□□□ 0.02
SHMT2-213ENST00000554600 CABLES1Q8TDN4 633 aa15.16■□□□□ 0.02
SHMT2-213ENST00000554600 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
SHMT2-213ENST00000554600 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
SHMT2-213ENST00000554600 RXRBP28702 533 aa15.14■□□□□ 0.01
SHMT2-213ENST00000554600 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
SHMT2-213ENST00000554600 USP21Q9UK80 565 aa15.14■□□□□ 0.01
SHMT2-213ENST00000554600 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
SHMT2-213ENST00000554600 PLCH1Q4KWH8 1693 aa15.13■□□□□ 0.01
SHMT2-213ENST00000554600 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
SHMT2-213ENST00000554600 ACEP12821 1306 aa15.13■□□□□ 0.01
SHMT2-213ENST00000554600 CCER1Q8TC90 406 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-213ENST00000554600 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms