RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
ACTN1-213ENST00000554508 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
ACTN1-213ENST00000554508 WAPLQ7Z5K2 1190 aa12.74□□□□□ -0.37
ACTN1-213ENST00000554508 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
ACTN1-213ENST00000554508 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-213ENST00000554508 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
ACTN1-213ENST00000554508 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
ACTN1-213ENST00000554508 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
ACTN1-213ENST00000554508 MEX3CQ5U5Q3 659 aaKnown RBP12.7□□□□□ -0.38
ACTN1-213ENST00000554508 DDX17Q92841 729 aaKnown RBP12.7□□□□□ -0.38
ACTN1-213ENST00000554508 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-213ENST00000554508 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
ACTN1-213ENST00000554508 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
ACTN1-213ENST00000554508 ESCO1Q5FWF5 840 aa12.69□□□□□ -0.38
ACTN1-213ENST00000554508 LRP6O75581 1613 aa12.68□□□□□ -0.38
ACTN1-213ENST00000554508 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
ACTN1-213ENST00000554508 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
ACTN1-213ENST00000554508 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-213ENST00000554508 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
ACTN1-213ENST00000554508 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
ACTN1-213ENST00000554508 POGKQ9P215 609 aa12.67□□□□□ -0.38
ACTN1-213ENST00000554508 PNPLA6Q8IY17 1366 aa12.67□□□□□ -0.38
ACTN1-213ENST00000554508 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-213ENST00000554508 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-213ENST00000554508 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-213ENST00000554508 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-213ENST00000554508 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
ACTN1-213ENST00000554508 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
ACTN1-213ENST00000554508 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
ACTN1-213ENST00000554508 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
ACTN1-213ENST00000554508 FOXO3O43524 673 aa12.64□□□□□ -0.39
ACTN1-213ENST00000554508 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
ACTN1-213ENST00000554508 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
ACTN1-213ENST00000554508 PXDNQ92626 1479 aa12.62□□□□□ -0.39
ACTN1-213ENST00000554508 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
ACTN1-213ENST00000554508 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
ACTN1-213ENST00000554508 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-213ENST00000554508 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
ACTN1-213ENST00000554508 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
ACTN1-213ENST00000554508 PSME1Q06323 249 aa12.6□□□□□ -0.39
ACTN1-213ENST00000554508 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
ACTN1-213ENST00000554508 AFF2P51816 1311 aa12.6□□□□□ -0.39
ACTN1-213ENST00000554508 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-213ENST00000554508 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-213ENST00000554508 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-213ENST00000554508 NGLY1Q96IV0 654 aa12.59□□□□□ -0.39
ACTN1-213ENST00000554508 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
ACTN1-213ENST00000554508 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
ACTN1-213ENST00000554508 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
ACTN1-213ENST00000554508 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-213ENST00000554508 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
ACTN1-213ENST00000554508 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
ACTN1-213ENST00000554508 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
ACTN1-213ENST00000554508 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-213ENST00000554508 SPATA31A3Q5VYP0 1347 aa12.58□□□□□ -0.4
ACTN1-213ENST00000554508 RXRBP28702 533 aa12.57□□□□□ -0.4
ACTN1-213ENST00000554508 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
ACTN1-213ENST00000554508 NBPF1Q3BBV0 1214 aa12.56□□□□□ -0.4
ACTN1-213ENST00000554508 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
ACTN1-213ENST00000554508 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
ACTN1-213ENST00000554508 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
ACTN1-213ENST00000554508 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
ACTN1-213ENST00000554508 FNBP4Q8N3X1 1017 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-213ENST00000554508 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
ACTN1-213ENST00000554508 CDK12Q9NYV4 1490 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-213ENST00000554508 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
ACTN1-213ENST00000554508 USP21Q9UK80 565 aa12.54□□□□□ -0.4
ACTN1-213ENST00000554508 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
ACTN1-213ENST00000554508 TNS3Q68CZ2 1445 aa12.54□□□□□ -0.4
ACTN1-213ENST00000554508 NUDT16Q96DE0 195 aaKnown RBP12.53□□□□□ -0.4
ACTN1-213ENST00000554508 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
ACTN1-213ENST00000554508 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
ACTN1-213ENST00000554508 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
ACTN1-213ENST00000554508 TRPM1Q7Z4N2 1603 aa12.52□□□□□ -0.4
ACTN1-213ENST00000554508 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
ACTN1-213ENST00000554508 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-213ENST00000554508 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-213ENST00000554508 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-213ENST00000554508 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-213ENST00000554508 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
ACTN1-213ENST00000554508 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
ACTN1-213ENST00000554508 ATP7BP35670 1465 aa12.5□□□□□ -0.41
ACTN1-213ENST00000554508 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
ACTN1-213ENST00000554508 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
ACTN1-213ENST00000554508 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
ACTN1-213ENST00000554508 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
ACTN1-213ENST00000554508 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
ACTN1-213ENST00000554508 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 ATRNO75882 1429 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 ROCK2O75116 1388 aaKnown RBP12.47□□□□□ -0.41
ACTN1-213ENST00000554508 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 SLIT2O94813 1529 aa12.47□□□□□ -0.41
ACTN1-213ENST00000554508 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-213ENST00000554508 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.41
ACTN1-213ENST00000554508 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-213ENST00000554508 SRPK2P78362 688 aaKnown RBP12.46□□□□□ -0.41
ACTN1-213ENST00000554508 NBPF8Q3BBV2 869 aa12.46□□□□□ -0.41
ACTN1-213ENST00000554508 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms