RNA–Protein interactions for RNA: ENST00000552786.1

TSPAN8-207, Transcript of tetraspanin 8, humanhuman

TSL 5

Gene TSPAN8, Length 398 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-207ENST00000552786 SNIP1Q8TAD8 396 aaKnown RBP9.02□□□□□ -0.97
TSPAN8-207ENST00000552786 WNT7AO00755 349 aa9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 TERTO14746 1132 aaKnown RBP9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 SMPD1P17405 629 aa9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 SALL2Q9Y467 1007 aaPredicted RBP9.01□□□□□ -0.97
TSPAN8-207ENST00000552786 GPR37O15354 613 aa9□□□□□ -0.97
TSPAN8-207ENST00000552786 FECHP22830 423 aa9□□□□□ -0.97
TSPAN8-207ENST00000552786 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
TSPAN8-207ENST00000552786 BRICD5Q6PL45 260 aa8.99□□□□□ -0.97
TSPAN8-207ENST00000552786 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
TSPAN8-207ENST00000552786 GCGRP47871 477 aa8.98□□□□□ -0.97
TSPAN8-207ENST00000552786 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
TSPAN8-207ENST00000552786 J3QL48 77 aa8.97□□□□□ -0.97
TSPAN8-207ENST00000552786 TRIM32Q13049 653 aa8.97□□□□□ -0.97
TSPAN8-207ENST00000552786 MRGPRX2Q96LB1 330 aa8.97□□□□□ -0.97
TSPAN8-207ENST00000552786 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
TSPAN8-207ENST00000552786 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
TSPAN8-207ENST00000552786 RNF19BQ6ZMZ0 732 aa8.96□□□□□ -0.98
TSPAN8-207ENST00000552786 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
TSPAN8-207ENST00000552786 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
TSPAN8-207ENST00000552786 GNPATO15228 680 aa8.95□□□□□ -0.98
TSPAN8-207ENST00000552786 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
TSPAN8-207ENST00000552786 FAM181BA6NEQ2 426 aa8.93□□□□□ -0.98
TSPAN8-207ENST00000552786 HPS1Q92902 700 aa8.93□□□□□ -0.98
TSPAN8-207ENST00000552786 Q3C1V9 767 aa8.92□□□□□ -0.98
TSPAN8-207ENST00000552786 SMYD5Q6GMV2 418 aa8.92□□□□□ -0.98
TSPAN8-207ENST00000552786 SLC16A10Q8TF71 515 aa8.92□□□□□ -0.98
TSPAN8-207ENST00000552786 MMP16P51512 607 aa8.91□□□□□ -0.98
TSPAN8-207ENST00000552786 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
TSPAN8-207ENST00000552786 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
TSPAN8-207ENST00000552786 GPIHBP1Q8IV16 184 aa8.88□□□□□ -0.99
TSPAN8-207ENST00000552786 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
TSPAN8-207ENST00000552786 BCANQ96GW7 911 aa8.87□□□□□ -0.99
TSPAN8-207ENST00000552786 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
TSPAN8-207ENST00000552786 DXOO77932 396 aaKnown RBP8.86□□□□□ -0.99
TSPAN8-207ENST00000552786 NXF1Q9UBU9 619 aaKnown RBP8.86□□□□□ -0.99
TSPAN8-207ENST00000552786 WNT7BP56706 349 aa8.85□□□□□ -0.99
TSPAN8-207ENST00000552786 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
TSPAN8-207ENST00000552786 GMPRP36959 345 aa8.84□□□□□ -0.99
TSPAN8-207ENST00000552786 SKOR1P84550 965 aa8.84□□□□□ -0.99
TSPAN8-207ENST00000552786 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
TSPAN8-207ENST00000552786 IRF7Q92985 503 aa8.83□□□□□ -1
TSPAN8-207ENST00000552786 KDM4AO75164 1064 aa8.81□□□□□ -1
TSPAN8-207ENST00000552786 NPAS3Q8IXF0 933 aa8.81□□□□□ -1
TSPAN8-207ENST00000552786 BMP1P13497 986 aa8.8□□□□□ -1
TSPAN8-207ENST00000552786 CD46P15529 392 aa8.8□□□□□ -1
TSPAN8-207ENST00000552786 VEGFBP49765 207 aa8.79□□□□□ -1
TSPAN8-207ENST00000552786 WASF2Q9Y6W5 498 aa8.79□□□□□ -1
TSPAN8-207ENST00000552786 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
TSPAN8-207ENST00000552786 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
TSPAN8-207ENST00000552786 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
TSPAN8-207ENST00000552786 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
TSPAN8-207ENST00000552786 USP46P62068 366 aa8.77□□□□□ -1.01
TSPAN8-207ENST00000552786 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
TSPAN8-207ENST00000552786 HLA-CQ95604 372 aa8.76□□□□□ -1.01
TSPAN8-207ENST00000552786 H3BM21 787 aa8.75□□□□□ -1.01
TSPAN8-207ENST00000552786 JUNDP17535 347 aa8.75□□□□□ -1.01
TSPAN8-207ENST00000552786 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
TSPAN8-207ENST00000552786 SIAH2O43255 324 aa8.74□□□□□ -1.01
TSPAN8-207ENST00000552786 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
TSPAN8-207ENST00000552786 HOXA2O43364 376 aa8.73□□□□□ -1.01
TSPAN8-207ENST00000552786 MDM2Q00987 491 aaPredicted RBP8.73□□□□□ -1.01
TSPAN8-207ENST00000552786 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
TSPAN8-207ENST00000552786 ERBB4Q15303 1308 aa8.73□□□□□ -1.01
TSPAN8-207ENST00000552786 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
TSPAN8-207ENST00000552786 CCDC102AQ96A19 550 aa8.71□□□□□ -1.02
TSPAN8-207ENST00000552786 ZFP42Q96MM3 310 aa8.71□□□□□ -1.02
TSPAN8-207ENST00000552786 IRF6O14896 467 aa8.7□□□□□ -1.02
TSPAN8-207ENST00000552786 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
TSPAN8-207ENST00000552786 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
TSPAN8-207ENST00000552786 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
TSPAN8-207ENST00000552786 SH3BP2P78314 561 aa8.68□□□□□ -1.02
TSPAN8-207ENST00000552786 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
TSPAN8-207ENST00000552786 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
TSPAN8-207ENST00000552786 SCARF1Q14162 830 aa8.66□□□□□ -1.02
TSPAN8-207ENST00000552786 CCNYL3P0C7X3 344 aa8.65□□□□□ -1.02
TSPAN8-207ENST00000552786 NUTM1Q86Y26 1132 aa8.65□□□□□ -1.02
TSPAN8-207ENST00000552786 TLL2Q9Y6L7 1015 aa8.65□□□□□ -1.02
TSPAN8-207ENST00000552786 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
TSPAN8-207ENST00000552786 MS4A1P11836 297 aa8.64□□□□□ -1.03
TSPAN8-207ENST00000552786 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
TSPAN8-207ENST00000552786 NNTQ13423 1086 aa8.63□□□□□ -1.03
TSPAN8-207ENST00000552786 SUZ12Q15022 739 aaKnown RBP8.63□□□□□ -1.03
TSPAN8-207ENST00000552786 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
TSPAN8-207ENST00000552786 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
TSPAN8-207ENST00000552786 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
TSPAN8-207ENST00000552786 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
TSPAN8-207ENST00000552786 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
TSPAN8-207ENST00000552786 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
TSPAN8-207ENST00000552786 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
TSPAN8-207ENST00000552786 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
TSPAN8-207ENST00000552786 BAP1Q92560 729 aa8.61□□□□□ -1.03
TSPAN8-207ENST00000552786 FDX1P10109 184 aa8.6□□□□□ -1.03
TSPAN8-207ENST00000552786 VARSP26640 1264 aaKnown RBP8.6□□□□□ -1.03
TSPAN8-207ENST00000552786 CLCN1P35523 988 aa8.6□□□□□ -1.03
TSPAN8-207ENST00000552786 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
TSPAN8-207ENST00000552786 ADH1CP00326 375 aa8.59□□□□□ -1.03
TSPAN8-207ENST00000552786 TIMP2P16035 220 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms