RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 COL16A1Q07092 1604 aaPredicted RBP27.55■■■□□ 2
DDX54-208ENST00000551344 ORAI2Q96SN7 254 aa27.53■■■□□ 2
DDX54-208ENST00000551344 LRRC59Q96AG4 307 aaKnown RBP27.52■■■□□ 2
DDX54-208ENST00000551344 PRAM1Q96QH2 718 aa27.51■■□□□ 1.99
DDX54-208ENST00000551344 SPATA31A6Q5VVP1 1343 aa27.5■■□□□ 1.99
DDX54-208ENST00000551344 POGKQ9P215 609 aa27.5■■□□□ 1.99
DDX54-208ENST00000551344 ADGRB1O14514 1584 aa27.5■■□□□ 1.99
DDX54-208ENST00000551344 CDC42BPGQ6DT37 1551 aa27.5■■□□□ 1.99
DDX54-208ENST00000551344 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
DDX54-208ENST00000551344 ESCO1Q5FWF5 840 aa27.48■■□□□ 1.99
DDX54-208ENST00000551344 DDX17Q92841 729 aaKnown RBP27.48■■□□□ 1.99
DDX54-208ENST00000551344 TRAK1Q9UPV9 953 aa27.48■■□□□ 1.99
DDX54-208ENST00000551344 NHSL1Q5SYE7 1610 aa27.46■■□□□ 1.99
DDX54-208ENST00000551344 SIN3AQ96ST3 1273 aa27.46■■□□□ 1.99
DDX54-208ENST00000551344 SAFB2Q14151 953 aaKnown RBP eCLIP27.44■■□□□ 1.98
DDX54-208ENST00000551344 SOS2Q07890 1332 aaPredicted RBP27.43■■□□□ 1.98
DDX54-208ENST00000551344 NUTM2FA1L443 756 aa27.43■■□□□ 1.98
DDX54-208ENST00000551344 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
DDX54-208ENST00000551344 RGS17Q9UGC6 210 aaPredicted RBP27.42■■□□□ 1.98
DDX54-208ENST00000551344 NEUROD1Q13562 356 aa27.41■■□□□ 1.98
DDX54-208ENST00000551344 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
DDX54-208ENST00000551344 SHPRHQ149N8 1683 aa27.39■■□□□ 1.97
DDX54-208ENST00000551344 FOXO3O43524 673 aa27.38■■□□□ 1.97
DDX54-208ENST00000551344 SOCS7O14512 581 aa27.36■■□□□ 1.97
DDX54-208ENST00000551344 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
DDX54-208ENST00000551344 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
DDX54-208ENST00000551344 FMN2Q9NZ56 1722 aa27.35■■□□□ 1.97
DDX54-208ENST00000551344 PNPLA6Q8IY17 1366 aa27.35■■□□□ 1.97
DDX54-208ENST00000551344 KIAA1210Q9ULL0 1709 aa27.34■■□□□ 1.97
DDX54-208ENST00000551344 NUTM2BA6NNL0 878 aaPredicted RBP27.34■■□□□ 1.97
DDX54-208ENST00000551344 NUTM2EB1AL46 878 aaPredicted RBP27.34■■□□□ 1.97
DDX54-208ENST00000551344 NUTM2AQ8IVF1 878 aaPredicted RBP27.34■■□□□ 1.97
DDX54-208ENST00000551344 MINK1Q8N4C8 1332 aaPredicted RBP27.33■■□□□ 1.97
DDX54-208ENST00000551344 LRP6O75581 1613 aa27.32■■□□□ 1.96
DDX54-208ENST00000551344 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
DDX54-208ENST00000551344 PHF8Q9UPP1 1060 aa27.32■■□□□ 1.96
DDX54-208ENST00000551344 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
DDX54-208ENST00000551344 ANKARQ7Z5J8 1434 aa27.29■■□□□ 1.96
DDX54-208ENST00000551344 ADGRB2O60241 1585 aa27.29■■□□□ 1.96
DDX54-208ENST00000551344 EIF3AQ14152 1382 aaKnown RBP27.28■■□□□ 1.96
DDX54-208ENST00000551344 POTEAQ6S8J7 498 aa27.28■■□□□ 1.96
DDX54-208ENST00000551344 PXDNQ92626 1479 aa27.27■■□□□ 1.96
DDX54-208ENST00000551344 XPCQ01831 940 aaPredicted RBP27.27■■□□□ 1.96
DDX54-208ENST00000551344 ZNF772Q68DY9 489 aaPredicted RBP27.26■■□□□ 1.95
DDX54-208ENST00000551344 KRT28Q7Z3Y7 464 aa27.26■■□□□ 1.95
DDX54-208ENST00000551344 PSME1Q06323 249 aa27.25■■□□□ 1.95
DDX54-208ENST00000551344 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
DDX54-208ENST00000551344 ARHGEF28Q8N1W1 1705 aaKnown RBP27.23■■□□□ 1.95
DDX54-208ENST00000551344 SPATA31A3Q5VYP0 1347 aa27.21■■□□□ 1.95
DDX54-208ENST00000551344 PMFBP1Q8TBY8 1022 aa27.21■■□□□ 1.95
DDX54-208ENST00000551344 RGPD8O14715 1765 aaPredicted RBP27.21■■□□□ 1.95
DDX54-208ENST00000551344 PRR36Q9H6K5 1346 aa27.2■■□□□ 1.95
DDX54-208ENST00000551344 CDK19Q9BWU1 502 aa27.19■■□□□ 1.94
DDX54-208ENST00000551344 TULP4Q9NRJ4 1543 aa27.19■■□□□ 1.94
DDX54-208ENST00000551344 CENPJQ9HC77 1338 aaPredicted RBP27.18■■□□□ 1.94
DDX54-208ENST00000551344 ADAMTS2O95450 1211 aa27.18■■□□□ 1.94
DDX54-208ENST00000551344 USP32Q8NFA0 1604 aa27.17■■□□□ 1.94
DDX54-208ENST00000551344 NUDT16Q96DE0 195 aaKnown RBP27.17■■□□□ 1.94
DDX54-208ENST00000551344 C8orf37Q96NL8 207 aa27.17■■□□□ 1.94
DDX54-208ENST00000551344 TONSLQ96HA7 1378 aa27.17■■□□□ 1.94
DDX54-208ENST00000551344 NBPF8Q3BBV2 869 aa27.16■■□□□ 1.94
DDX54-208ENST00000551344 AFF2P51816 1311 aa27.16■■□□□ 1.94
DDX54-208ENST00000551344 SBNO1A3KN83 1393 aa27.15■■□□□ 1.94
DDX54-208ENST00000551344 ROCK2O75116 1388 aaKnown RBP27.15■■□□□ 1.94
DDX54-208ENST00000551344 NGLY1Q96IV0 654 aa27.15■■□□□ 1.94
DDX54-208ENST00000551344 COL22A1Q8NFW1 1626 aaPredicted RBP27.15■■□□□ 1.94
DDX54-208ENST00000551344 NGDNQ8NEJ9 315 aaKnown RBP27.13■■□□□ 1.93
DDX54-208ENST00000551344 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
DDX54-208ENST00000551344 GPRASP1Q5JY77 1395 aa27.12■■□□□ 1.93
DDX54-208ENST00000551344 CCDC61Q9Y6R9 512 aa27.12■■□□□ 1.93
DDX54-208ENST00000551344 TNS3Q68CZ2 1445 aa27.1■■□□□ 1.93
DDX54-208ENST00000551344 FNBP4Q8N3X1 1017 aaPredicted RBP27.09■■□□□ 1.93
DDX54-208ENST00000551344 ARHGEF10O15013 1369 aa27.09■■□□□ 1.93
DDX54-208ENST00000551344 ATP7BP35670 1465 aa27.08■■□□□ 1.93
DDX54-208ENST00000551344 RXRBP28702 533 aa27.08■■□□□ 1.93
DDX54-208ENST00000551344 LMOD2Q6P5Q4 547 aa27.08■■□□□ 1.93
DDX54-208ENST00000551344 PCGF6Q9BYE7 350 aa27.08■■□□□ 1.93
DDX54-208ENST00000551344 SRPK2P78362 688 aaKnown RBP27.07■■□□□ 1.92
DDX54-208ENST00000551344 QTRT2Q9H974 415 aaKnown RBP27.07■■□□□ 1.92
DDX54-208ENST00000551344 PLEKHG3A1L390 1219 aa27.06■■□□□ 1.92
DDX54-208ENST00000551344 CARD11Q9BXL7 1154 aa27.04■■□□□ 1.92
DDX54-208ENST00000551344 USP21Q9UK80 565 aa27.04■■□□□ 1.92
DDX54-208ENST00000551344 EVC2Q86UK5 1308 aa27.02■■□□□ 1.92
DDX54-208ENST00000551344 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
DDX54-208ENST00000551344 CABP2Q9NPB3 220 aa27.02■■□□□ 1.92
DDX54-208ENST00000551344 ITSN1Q15811 1721 aa27.02■■□□□ 1.92
DDX54-208ENST00000551344 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
DDX54-208ENST00000551344 ACEP12821 1306 aa27.01■■□□□ 1.91
DDX54-208ENST00000551344 CABLES1Q8TDN4 633 aa27.01■■□□□ 1.91
DDX54-208ENST00000551344 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
DDX54-208ENST00000551344 PAK3O75914 559 aaPredicted RBP27■■□□□ 1.91
DDX54-208ENST00000551344 RBM6P78332 1123 aaKnown RBP27■■□□□ 1.91
DDX54-208ENST00000551344 TRPC5Q9UL62 973 aaPredicted RBP26.99■■□□□ 1.91
DDX54-208ENST00000551344 QRICH2Q9H0J4 1663 aa26.98■■□□□ 1.91
DDX54-208ENST00000551344 RALGAPBQ86X10 1494 aa26.97■■□□□ 1.91
DDX54-208ENST00000551344 TRPM3Q9HCF6 1732 aaPredicted RBP26.96■■□□□ 1.91
DDX54-208ENST00000551344 TIMELESSQ9UNS1 1208 aa26.96■■□□□ 1.91
DDX54-208ENST00000551344 PLEKHG5O94827 1062 aa26.95■■□□□ 1.9
DDX54-208ENST00000551344 PPIP5K1Q6PFW1 1433 aa26.95■■□□□ 1.9
DDX54-208ENST00000551344 CDK12Q9NYV4 1490 aaPredicted RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms