RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 SOCS7O14512 581 aa33.88■■■■□ 3.01
CACNB3-208ENST00000548279 DHX57Q6P158 1386 aaKnown RBP33.87■■■■□ 3.01
CACNB3-208ENST00000548279 LRP6O75581 1613 aa33.87■■■■□ 3.01
CACNB3-208ENST00000548279 DCAF11Q8TEB1 546 aa33.85■■■■□ 3.01
CACNB3-208ENST00000548279 ORAI2Q96SN7 254 aa33.85■■■■□ 3.01
CACNB3-208ENST00000548279 KDM2AQ9Y2K7 1162 aa33.85■■■■□ 3.01
CACNB3-208ENST00000548279 ADGRB1O14514 1584 aa33.84■■■■□ 3.01
CACNB3-208ENST00000548279 SPATA31A6Q5VVP1 1343 aa33.79■■■■□ 3
CACNB3-208ENST00000548279 SIRT1Q96EB6 747 aa33.78■■■■□ 3
CACNB3-208ENST00000548279 FMN2Q9NZ56 1722 aa33.77■■■■□ 3
CACNB3-208ENST00000548279 DLC1Q96QB1 1528 aa33.74■■■□□ 2.99
CACNB3-208ENST00000548279 NUTM2FA1L443 756 aa33.74■■■□□ 2.99
CACNB3-208ENST00000548279 POTEAQ6S8J7 498 aa33.72■■■□□ 2.99
CACNB3-208ENST00000548279 LRRC59Q96AG4 307 aaKnown RBP33.72■■■□□ 2.99
CACNB3-208ENST00000548279 PRAM1Q96QH2 718 aa33.72■■■□□ 2.99
CACNB3-208ENST00000548279 PNPLA6Q8IY17 1366 aa33.72■■■□□ 2.99
CACNB3-208ENST00000548279 ESCO1Q5FWF5 840 aa33.71■■■□□ 2.99
CACNB3-208ENST00000548279 SOS2Q07890 1332 aaPredicted RBP33.71■■■□□ 2.99
CACNB3-208ENST00000548279 SAFB2Q14151 953 aaKnown RBP eCLIP33.7■■■□□ 2.99
CACNB3-208ENST00000548279 STAC3Q96MF2 364 aa33.7■■■□□ 2.99
CACNB3-208ENST00000548279 NUTM2BA6NNL0 878 aaPredicted RBP33.67■■■□□ 2.98
CACNB3-208ENST00000548279 NUTM2EB1AL46 878 aaPredicted RBP33.67■■■□□ 2.98
CACNB3-208ENST00000548279 NUTM2AQ8IVF1 878 aaPredicted RBP33.67■■■□□ 2.98
CACNB3-208ENST00000548279 TRAK1Q9UPV9 953 aa33.67■■■□□ 2.98
CACNB3-208ENST00000548279 RGPD8O14715 1765 aaPredicted RBP33.65■■■□□ 2.98
CACNB3-208ENST00000548279 PXDNQ92626 1479 aa33.64■■■□□ 2.98
CACNB3-208ENST00000548279 MEX3CQ5U5Q3 659 aaKnown RBP33.64■■■□□ 2.98
CACNB3-208ENST00000548279 ADGRB2O60241 1585 aa33.62■■■□□ 2.97
CACNB3-208ENST00000548279 POGKQ9P215 609 aa33.61■■■□□ 2.97
CACNB3-208ENST00000548279 NPHP3Q7Z494 1330 aa33.6■■■□□ 2.97
CACNB3-208ENST00000548279 ARHGEF28Q8N1W1 1705 aaKnown RBP33.6■■■□□ 2.97
CACNB3-208ENST00000548279 FOXO3O43524 673 aa33.6■■■□□ 2.97
CACNB3-208ENST00000548279 KIF1AQ12756 1690 aa33.59■■■□□ 2.97
CACNB3-208ENST00000548279 XPCQ01831 940 aaPredicted RBP33.59■■■□□ 2.97
CACNB3-208ENST00000548279 USP32Q8NFA0 1604 aa33.59■■■□□ 2.97
CACNB3-208ENST00000548279 KIAA1210Q9ULL0 1709 aa33.58■■■□□ 2.97
CACNB3-208ENST00000548279 SIN3AQ96ST3 1273 aa33.57■■■□□ 2.96
CACNB3-208ENST00000548279 COL22A1Q8NFW1 1626 aaPredicted RBP33.56■■■□□ 2.96
CACNB3-208ENST00000548279 HIRIP3Q9BW71 556 aaPredicted RBP33.55■■■□□ 2.96
CACNB3-208ENST00000548279 MINK1Q8N4C8 1332 aaPredicted RBP33.53■■■□□ 2.96
CACNB3-208ENST00000548279 NBPF1Q3BBV0 1214 aa33.5■■■□□ 2.95
CACNB3-208ENST00000548279 L3MBTL2Q969R5 705 aa33.49■■■□□ 2.95
CACNB3-208ENST00000548279 PHF8Q9UPP1 1060 aa33.49■■■□□ 2.95
CACNB3-208ENST00000548279 AFF2P51816 1311 aa33.49■■■□□ 2.95
CACNB3-208ENST00000548279 ANKARQ7Z5J8 1434 aa33.48■■■□□ 2.95
CACNB3-208ENST00000548279 ZNF772Q68DY9 489 aaPredicted RBP33.47■■■□□ 2.95
CACNB3-208ENST00000548279 ADAMTS2O95450 1211 aa33.46■■■□□ 2.95
CACNB3-208ENST00000548279 C8orf37Q96NL8 207 aa33.46■■■□□ 2.95
CACNB3-208ENST00000548279 PRR36Q9H6K5 1346 aa33.46■■■□□ 2.95
CACNB3-208ENST00000548279 TULP4Q9NRJ4 1543 aa33.45■■■□□ 2.95
CACNB3-208ENST00000548279 NEUROD1Q13562 356 aa33.44■■■□□ 2.94
CACNB3-208ENST00000548279 TRIM26Q12899 539 aaPredicted RBP33.43■■■□□ 2.94
CACNB3-208ENST00000548279 KRT28Q7Z3Y7 464 aa33.43■■■□□ 2.94
CACNB3-208ENST00000548279 WASLO00401 505 aaPredicted RBP33.42■■■□□ 2.94
CACNB3-208ENST00000548279 SPATA31A3Q5VYP0 1347 aa33.42■■■□□ 2.94
CACNB3-208ENST00000548279 PMFBP1Q8TBY8 1022 aa33.4■■■□□ 2.94
CACNB3-208ENST00000548279 TRPM1Q7Z4N2 1603 aa33.37■■■□□ 2.93
CACNB3-208ENST00000548279 TNS3Q68CZ2 1445 aa33.36■■■□□ 2.93
CACNB3-208ENST00000548279 MARF1Q9Y4F3 1742 aaKnown RBP33.36■■■□□ 2.93
CACNB3-208ENST00000548279 EIF3AQ14152 1382 aaKnown RBP33.36■■■□□ 2.93
CACNB3-208ENST00000548279 ATP7BP35670 1465 aa33.35■■■□□ 2.93
CACNB3-208ENST00000548279 NGLY1Q96IV0 654 aa33.34■■■□□ 2.93
CACNB3-208ENST00000548279 TRPM3Q9HCF6 1732 aaPredicted RBP33.33■■■□□ 2.93
CACNB3-208ENST00000548279 SBNO1A3KN83 1393 aa33.32■■■□□ 2.92
CACNB3-208ENST00000548279 PSME1Q06323 249 aa33.3■■■□□ 2.92
CACNB3-208ENST00000548279 ITSN1Q15811 1721 aa33.29■■■□□ 2.92
CACNB3-208ENST00000548279 RXRBP28702 533 aa33.29■■■□□ 2.92
CACNB3-208ENST00000548279 ABCA3Q99758 1704 aa33.28■■■□□ 2.92
CACNB3-208ENST00000548279 CDK19Q9BWU1 502 aa33.28■■■□□ 2.92
CACNB3-208ENST00000548279 QTRT2Q9H974 415 aaKnown RBP33.28■■■□□ 2.92
CACNB3-208ENST00000548279 TOPAZ1Q8N9V7 1692 aa33.27■■■□□ 2.92
CACNB3-208ENST00000548279 FNBP4Q8N3X1 1017 aaPredicted RBP33.27■■■□□ 2.92
CACNB3-208ENST00000548279 NUDT16Q96DE0 195 aaKnown RBP33.27■■■□□ 2.92
CACNB3-208ENST00000548279 QRICH2Q9H0J4 1663 aa33.26■■■□□ 2.92
CACNB3-208ENST00000548279 ALS2Q96Q42 1657 aa33.26■■■□□ 2.91
CACNB3-208ENST00000548279 USP21Q9UK80 565 aa33.25■■■□□ 2.91
CACNB3-208ENST00000548279 CENPJQ9HC77 1338 aaPredicted RBP33.25■■■□□ 2.91
CACNB3-208ENST00000548279 NBPF8Q3BBV2 869 aa33.24■■■□□ 2.91
CACNB3-208ENST00000548279 CABLES1Q8TDN4 633 aa33.24■■■□□ 2.91
CACNB3-208ENST00000548279 CDK12Q9NYV4 1490 aaPredicted RBP33.24■■■□□ 2.91
CACNB3-208ENST00000548279 PLEKHG5O94827 1062 aa33.22■■■□□ 2.91
CACNB3-208ENST00000548279 BCL9LQ86UU0 1499 aa33.22■■■□□ 2.91
CACNB3-208ENST00000548279 LMOD2Q6P5Q4 547 aa33.21■■■□□ 2.91
CACNB3-208ENST00000548279 ARHGEF10O15013 1369 aa33.21■■■□□ 2.91
CACNB3-208ENST00000548279 GPRASP1Q5JY77 1395 aa33.21■■■□□ 2.91
CACNB3-208ENST00000548279 RGS12O14924 1447 aa33.2■■■□□ 2.91
CACNB3-208ENST00000548279 ATRNO75882 1429 aa33.19■■■□□ 2.9
CACNB3-208ENST00000548279 RBM6P78332 1123 aaKnown RBP33.19■■■□□ 2.9
CACNB3-208ENST00000548279 NGDNQ8NEJ9 315 aaKnown RBP33.19■■■□□ 2.9
CACNB3-208ENST00000548279 ROCK2O75116 1388 aaKnown RBP33.19■■■□□ 2.9
CACNB3-208ENST00000548279 SLIT2O94813 1529 aa33.16■■■□□ 2.9
CACNB3-208ENST00000548279 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.14■■■□□ 2.9
CACNB3-208ENST00000548279 CRYBG1Q9Y4K1 1723 aa33.14■■■□□ 2.9
CACNB3-208ENST00000548279 TRPC5Q9UL62 973 aaPredicted RBP33.14■■■□□ 2.9
CACNB3-208ENST00000548279 CCDC61Q9Y6R9 512 aa33.13■■■□□ 2.89
CACNB3-208ENST00000548279 POLR3AO14802 1390 aaPredicted RBP33.12■■■□□ 2.89
CACNB3-208ENST00000548279 HAP1P54257 671 aaPredicted RBP33.12■■■□□ 2.89
CACNB3-208ENST00000548279 CABP2Q9NPB3 220 aa33.12■■■□□ 2.89
CACNB3-208ENST00000548279 TONSLQ96HA7 1378 aa33.11■■■□□ 2.89
CACNB3-208ENST00000548279 PLCH1Q4KWH8 1693 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms