RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 NHSL1Q5SYE7 1610 aa18.09■□□□□ 0.49
SSH1-206ENST00000547381 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
SSH1-206ENST00000547381 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
SSH1-206ENST00000547381 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
SSH1-206ENST00000547381 KDM2AQ9Y2K7 1162 aa18.07■□□□□ 0.48
SSH1-206ENST00000547381 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
SSH1-206ENST00000547381 RGS17Q9UGC6 210 aaPredicted RBP18.05■□□□□ 0.48
SSH1-206ENST00000547381 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
SSH1-206ENST00000547381 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
SSH1-206ENST00000547381 MEX3CQ5U5Q3 659 aaKnown RBP18.02■□□□□ 0.48
SSH1-206ENST00000547381 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
SSH1-206ENST00000547381 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
SSH1-206ENST00000547381 POGKQ9P215 609 aa18.01■□□□□ 0.47
SSH1-206ENST00000547381 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
SSH1-206ENST00000547381 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
SSH1-206ENST00000547381 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
SSH1-206ENST00000547381 ADGRB1O14514 1584 aa18■□□□□ 0.47
SSH1-206ENST00000547381 LRP6O75581 1613 aa17.98■□□□□ 0.47
SSH1-206ENST00000547381 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
SSH1-206ENST00000547381 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
SSH1-206ENST00000547381 NUTM2BA6NNL0 878 aaPredicted RBP17.97■□□□□ 0.47
SSH1-206ENST00000547381 NUTM2EB1AL46 878 aaPredicted RBP17.97■□□□□ 0.47
SSH1-206ENST00000547381 NUTM2AQ8IVF1 878 aaPredicted RBP17.97■□□□□ 0.47
SSH1-206ENST00000547381 TRAK1Q9UPV9 953 aa17.97■□□□□ 0.47
SSH1-206ENST00000547381 FMN2Q9NZ56 1722 aa17.96■□□□□ 0.47
SSH1-206ENST00000547381 FOXO3O43524 673 aa17.96■□□□□ 0.47
SSH1-206ENST00000547381 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
SSH1-206ENST00000547381 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
SSH1-206ENST00000547381 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
SSH1-206ENST00000547381 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
SSH1-206ENST00000547381 PXDNQ92626 1479 aa17.92■□□□□ 0.46
SSH1-206ENST00000547381 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
SSH1-206ENST00000547381 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
SSH1-206ENST00000547381 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
SSH1-206ENST00000547381 KIAA1210Q9ULL0 1709 aa17.91■□□□□ 0.46
SSH1-206ENST00000547381 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
SSH1-206ENST00000547381 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
SSH1-206ENST00000547381 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
SSH1-206ENST00000547381 COL22A1Q8NFW1 1626 aaPredicted RBP17.88■□□□□ 0.45
SSH1-206ENST00000547381 XPCQ01831 940 aaPredicted RBP17.88■□□□□ 0.45
SSH1-206ENST00000547381 PSME1Q06323 249 aa17.88■□□□□ 0.45
SSH1-206ENST00000547381 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
SSH1-206ENST00000547381 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
SSH1-206ENST00000547381 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
SSH1-206ENST00000547381 ADAMTS2O95450 1211 aa17.87■□□□□ 0.45
SSH1-206ENST00000547381 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
SSH1-206ENST00000547381 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
SSH1-206ENST00000547381 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
SSH1-206ENST00000547381 AFF2P51816 1311 aa17.87■□□□□ 0.45
SSH1-206ENST00000547381 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
SSH1-206ENST00000547381 NGLY1Q96IV0 654 aa17.86■□□□□ 0.45
SSH1-206ENST00000547381 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
SSH1-206ENST00000547381 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
SSH1-206ENST00000547381 SPATA31A3Q5VYP0 1347 aa17.85■□□□□ 0.45
SSH1-206ENST00000547381 RXRBP28702 533 aa17.84■□□□□ 0.45
SSH1-206ENST00000547381 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
SSH1-206ENST00000547381 TULP4Q9NRJ4 1543 aa17.83■□□□□ 0.45
SSH1-206ENST00000547381 USP32Q8NFA0 1604 aa17.83■□□□□ 0.44
SSH1-206ENST00000547381 SBNO1A3KN83 1393 aa17.82■□□□□ 0.44
SSH1-206ENST00000547381 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
SSH1-206ENST00000547381 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
SSH1-206ENST00000547381 PRR36Q9H6K5 1346 aa17.8■□□□□ 0.44
SSH1-206ENST00000547381 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
SSH1-206ENST00000547381 QTRT2Q9H974 415 aaKnown RBP17.8■□□□□ 0.44
SSH1-206ENST00000547381 ARHGEF10O15013 1369 aa17.79■□□□□ 0.44
SSH1-206ENST00000547381 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
SSH1-206ENST00000547381 USP21Q9UK80 565 aa17.79■□□□□ 0.44
SSH1-206ENST00000547381 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
SSH1-206ENST00000547381 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
SSH1-206ENST00000547381 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
SSH1-206ENST00000547381 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
SSH1-206ENST00000547381 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.44
SSH1-206ENST00000547381 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
SSH1-206ENST00000547381 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
SSH1-206ENST00000547381 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
SSH1-206ENST00000547381 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
SSH1-206ENST00000547381 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
SSH1-206ENST00000547381 ATP7BP35670 1465 aa17.75■□□□□ 0.43
SSH1-206ENST00000547381 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
SSH1-206ENST00000547381 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
SSH1-206ENST00000547381 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
SSH1-206ENST00000547381 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
SSH1-206ENST00000547381 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
SSH1-206ENST00000547381 BCL9LQ86UU0 1499 aa17.71■□□□□ 0.43
SSH1-206ENST00000547381 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
SSH1-206ENST00000547381 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
SSH1-206ENST00000547381 CABLES1Q8TDN4 633 aa17.71■□□□□ 0.43
SSH1-206ENST00000547381 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.43
SSH1-206ENST00000547381 ATRNO75882 1429 aa17.71■□□□□ 0.43
SSH1-206ENST00000547381 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
SSH1-206ENST00000547381 QRICH2Q9H0J4 1663 aa17.7■□□□□ 0.42
SSH1-206ENST00000547381 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
SSH1-206ENST00000547381 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
SSH1-206ENST00000547381 ACEP12821 1306 aa17.69■□□□□ 0.42
SSH1-206ENST00000547381 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
SSH1-206ENST00000547381 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
SSH1-206ENST00000547381 NBPF8Q3BBV2 869 aa17.68■□□□□ 0.42
SSH1-206ENST00000547381 EVC2Q86UK5 1308 aa17.68■□□□□ 0.42
SSH1-206ENST00000547381 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
SSH1-206ENST00000547381 SLIT2O94813 1529 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms