RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
LINC00661-201ENST00000546512 SIRT1Q96EB6 747 aa18.9■□□□□ 0.62
LINC00661-201ENST00000546512 ADGRB1O14514 1584 aa18.89■□□□□ 0.62
LINC00661-201ENST00000546512 NHSL1Q5SYE7 1610 aa18.88■□□□□ 0.61
LINC00661-201ENST00000546512 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
LINC00661-201ENST00000546512 DLC1Q96QB1 1528 aa18.86■□□□□ 0.61
LINC00661-201ENST00000546512 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
LINC00661-201ENST00000546512 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
LINC00661-201ENST00000546512 TRAK1Q9UPV9 953 aa18.85■□□□□ 0.61
LINC00661-201ENST00000546512 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
LINC00661-201ENST00000546512 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC00661-201ENST00000546512 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
LINC00661-201ENST00000546512 POGKQ9P215 609 aa18.84■□□□□ 0.61
LINC00661-201ENST00000546512 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
LINC00661-201ENST00000546512 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
LINC00661-201ENST00000546512 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
LINC00661-201ENST00000546512 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
LINC00661-201ENST00000546512 FMN2Q9NZ56 1722 aa18.82■□□□□ 0.6
LINC00661-201ENST00000546512 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
LINC00661-201ENST00000546512 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
LINC00661-201ENST00000546512 KIAA1210Q9ULL0 1709 aa18.79■□□□□ 0.6
LINC00661-201ENST00000546512 LRP6O75581 1613 aa18.78■□□□□ 0.6
LINC00661-201ENST00000546512 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.6
LINC00661-201ENST00000546512 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
LINC00661-201ENST00000546512 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
LINC00661-201ENST00000546512 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
LINC00661-201ENST00000546512 MINK1Q8N4C8 1332 aaPredicted RBP18.76■□□□□ 0.59
LINC00661-201ENST00000546512 MEX3CQ5U5Q3 659 aaKnown RBP18.76■□□□□ 0.59
LINC00661-201ENST00000546512 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
LINC00661-201ENST00000546512 RGS17Q9UGC6 210 aaPredicted RBP18.76■□□□□ 0.59
LINC00661-201ENST00000546512 ARHGEF28Q8N1W1 1705 aaKnown RBP18.75■□□□□ 0.59
LINC00661-201ENST00000546512 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
LINC00661-201ENST00000546512 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
LINC00661-201ENST00000546512 FOXO3O43524 673 aa18.75■□□□□ 0.59
LINC00661-201ENST00000546512 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
LINC00661-201ENST00000546512 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
LINC00661-201ENST00000546512 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
LINC00661-201ENST00000546512 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
LINC00661-201ENST00000546512 PXDNQ92626 1479 aa18.72■□□□□ 0.59
LINC00661-201ENST00000546512 ANKARQ7Z5J8 1434 aa18.72■□□□□ 0.59
LINC00661-201ENST00000546512 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.59
LINC00661-201ENST00000546512 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
LINC00661-201ENST00000546512 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
LINC00661-201ENST00000546512 SOCS7O14512 581 aa18.7■□□□□ 0.58
LINC00661-201ENST00000546512 USP32Q8NFA0 1604 aa18.7■□□□□ 0.58
LINC00661-201ENST00000546512 WASLO00401 505 aaPredicted RBP18.69■□□□□ 0.58
LINC00661-201ENST00000546512 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
LINC00661-201ENST00000546512 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
LINC00661-201ENST00000546512 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
LINC00661-201ENST00000546512 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
LINC00661-201ENST00000546512 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
LINC00661-201ENST00000546512 PMFBP1Q8TBY8 1022 aa18.66■□□□□ 0.58
LINC00661-201ENST00000546512 PRR36Q9H6K5 1346 aa18.66■□□□□ 0.58
LINC00661-201ENST00000546512 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
LINC00661-201ENST00000546512 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
LINC00661-201ENST00000546512 PSME1Q06323 249 aa18.64■□□□□ 0.57
LINC00661-201ENST00000546512 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
LINC00661-201ENST00000546512 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
LINC00661-201ENST00000546512 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
LINC00661-201ENST00000546512 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
LINC00661-201ENST00000546512 ROCK2O75116 1388 aaKnown RBP18.64■□□□□ 0.57
LINC00661-201ENST00000546512 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
LINC00661-201ENST00000546512 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
LINC00661-201ENST00000546512 AFF2P51816 1311 aa18.62■□□□□ 0.57
LINC00661-201ENST00000546512 ATP7BP35670 1465 aa18.61■□□□□ 0.57
LINC00661-201ENST00000546512 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
LINC00661-201ENST00000546512 NUDT16Q96DE0 195 aaKnown RBP18.61■□□□□ 0.57
LINC00661-201ENST00000546512 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
LINC00661-201ENST00000546512 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
LINC00661-201ENST00000546512 GPRASP1Q5JY77 1395 aa18.59■□□□□ 0.57
LINC00661-201ENST00000546512 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
LINC00661-201ENST00000546512 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
LINC00661-201ENST00000546512 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
LINC00661-201ENST00000546512 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
LINC00661-201ENST00000546512 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
LINC00661-201ENST00000546512 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
LINC00661-201ENST00000546512 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
LINC00661-201ENST00000546512 TOPAZ1Q8N9V7 1692 aa18.55■□□□□ 0.56
LINC00661-201ENST00000546512 CCDC61Q9Y6R9 512 aa18.55■□□□□ 0.56
LINC00661-201ENST00000546512 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
LINC00661-201ENST00000546512 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
LINC00661-201ENST00000546512 PLEKHG5O94827 1062 aa18.54■□□□□ 0.56
LINC00661-201ENST00000546512 CARD11Q9BXL7 1154 aa18.54■□□□□ 0.56
LINC00661-201ENST00000546512 RXRBP28702 533 aa18.53■□□□□ 0.56
LINC00661-201ENST00000546512 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
LINC00661-201ENST00000546512 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
LINC00661-201ENST00000546512 MARF1Q9Y4F3 1742 aaKnown RBP18.52■□□□□ 0.56
LINC00661-201ENST00000546512 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.56
LINC00661-201ENST00000546512 USP21Q9UK80 565 aa18.52■□□□□ 0.56
LINC00661-201ENST00000546512 PLEKHG3A1L390 1219 aa18.51■□□□□ 0.55
LINC00661-201ENST00000546512 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
LINC00661-201ENST00000546512 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
LINC00661-201ENST00000546512 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
LINC00661-201ENST00000546512 POLR3AO14802 1390 aaPredicted RBP18.51■□□□□ 0.55
LINC00661-201ENST00000546512 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
LINC00661-201ENST00000546512 ACEP12821 1306 aa18.5■□□□□ 0.55
LINC00661-201ENST00000546512 EVC2Q86UK5 1308 aa18.5■□□□□ 0.55
LINC00661-201ENST00000546512 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
LINC00661-201ENST00000546512 ABCA3Q99758 1704 aa18.49■□□□□ 0.55
LINC00661-201ENST00000546512 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms