RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 SIRT1Q96EB6 747 aa29.29■■■□□ 2.28
PRPF19-207ENST00000546152 CDC42BPGQ6DT37 1551 aa29.29■■■□□ 2.28
PRPF19-207ENST00000546152 DDX17Q92841 729 aaKnown RBP29.27■■■□□ 2.28
PRPF19-207ENST00000546152 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
PRPF19-207ENST00000546152 RGS17Q9UGC6 210 aaPredicted RBP29.26■■■□□ 2.27
PRPF19-207ENST00000546152 ADGRB1O14514 1584 aa29.26■■■□□ 2.27
PRPF19-207ENST00000546152 SHPRHQ149N8 1683 aa29.24■■■□□ 2.27
PRPF19-207ENST00000546152 SPATA31A6Q5VVP1 1343 aa29.22■■■□□ 2.27
PRPF19-207ENST00000546152 SOCS7O14512 581 aa29.2■■■□□ 2.26
PRPF19-207ENST00000546152 DLC1Q96QB1 1528 aa29.2■■■□□ 2.26
PRPF19-207ENST00000546152 LRRC59Q96AG4 307 aaKnown RBP29.19■■■□□ 2.26
PRPF19-207ENST00000546152 PRAM1Q96QH2 718 aa29.19■■■□□ 2.26
PRPF19-207ENST00000546152 LRP6O75581 1613 aa29.19■■■□□ 2.26
PRPF19-207ENST00000546152 ESCO1Q5FWF5 840 aa29.16■■■□□ 2.26
PRPF19-207ENST00000546152 NUTM2FA1L443 756 aa29.15■■■□□ 2.26
PRPF19-207ENST00000546152 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
PRPF19-207ENST00000546152 SOS2Q07890 1332 aaPredicted RBP29.15■■■□□ 2.26
PRPF19-207ENST00000546152 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.26
PRPF19-207ENST00000546152 SAFB2Q14151 953 aaKnown RBP eCLIP29.14■■■□□ 2.26
PRPF19-207ENST00000546152 POGKQ9P215 609 aa29.12■■■□□ 2.25
PRPF19-207ENST00000546152 PNPLA6Q8IY17 1366 aa29.12■■■□□ 2.25
PRPF19-207ENST00000546152 POTEAQ6S8J7 498 aa29.09■■■□□ 2.25
PRPF19-207ENST00000546152 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
PRPF19-207ENST00000546152 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
PRPF19-207ENST00000546152 TRIM26Q12899 539 aaPredicted RBP29.08■■■□□ 2.25
PRPF19-207ENST00000546152 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
PRPF19-207ENST00000546152 SIN3AQ96ST3 1273 aa29.08■■■□□ 2.25
PRPF19-207ENST00000546152 NPHP3Q7Z494 1330 aa29.08■■■□□ 2.25
PRPF19-207ENST00000546152 FOXO3O43524 673 aa29.07■■■□□ 2.24
PRPF19-207ENST00000546152 MEX3CQ5U5Q3 659 aaKnown RBP29.06■■■□□ 2.24
PRPF19-207ENST00000546152 PXDNQ92626 1479 aa29.05■■■□□ 2.24
PRPF19-207ENST00000546152 ADGRB2O60241 1585 aa29.05■■■□□ 2.24
PRPF19-207ENST00000546152 KIAA1210Q9ULL0 1709 aa29.04■■■□□ 2.24
PRPF19-207ENST00000546152 L3MBTL2Q969R5 705 aa29.03■■■□□ 2.24
PRPF19-207ENST00000546152 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
PRPF19-207ENST00000546152 NBPF1Q3BBV0 1214 aa29.01■■■□□ 2.23
PRPF19-207ENST00000546152 HIRIP3Q9BW71 556 aaPredicted RBP29.01■■■□□ 2.23
PRPF19-207ENST00000546152 RGPD8O14715 1765 aaPredicted RBP29.01■■■□□ 2.23
PRPF19-207ENST00000546152 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
PRPF19-207ENST00000546152 MINK1Q8N4C8 1332 aaPredicted RBP29■■■□□ 2.23
PRPF19-207ENST00000546152 KIF1AQ12756 1690 aa29■■■□□ 2.23
PRPF19-207ENST00000546152 NEUROD1Q13562 356 aa28.99■■■□□ 2.23
PRPF19-207ENST00000546152 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
PRPF19-207ENST00000546152 USP32Q8NFA0 1604 aa28.98■■■□□ 2.23
PRPF19-207ENST00000546152 ANKARQ7Z5J8 1434 aa28.97■■■□□ 2.23
PRPF19-207ENST00000546152 COL22A1Q8NFW1 1626 aaPredicted RBP28.96■■■□□ 2.23
PRPF19-207ENST00000546152 WASLO00401 505 aaPredicted RBP28.95■■■□□ 2.22
PRPF19-207ENST00000546152 ZNF772Q68DY9 489 aaPredicted RBP28.94■■■□□ 2.22
PRPF19-207ENST00000546152 KRT28Q7Z3Y7 464 aa28.93■■■□□ 2.22
PRPF19-207ENST00000546152 PRR36Q9H6K5 1346 aa28.92■■■□□ 2.22
PRPF19-207ENST00000546152 TULP4Q9NRJ4 1543 aa28.91■■■□□ 2.22
PRPF19-207ENST00000546152 AFF2P51816 1311 aa28.91■■■□□ 2.22
PRPF19-207ENST00000546152 SPATA31A3Q5VYP0 1347 aa28.91■■■□□ 2.22
PRPF19-207ENST00000546152 EIF3AQ14152 1382 aaKnown RBP28.9■■■□□ 2.22
PRPF19-207ENST00000546152 ADAMTS2O95450 1211 aa28.9■■■□□ 2.22
PRPF19-207ENST00000546152 C8orf37Q96NL8 207 aa28.9■■■□□ 2.22
PRPF19-207ENST00000546152 PMFBP1Q8TBY8 1022 aa28.89■■■□□ 2.22
PRPF19-207ENST00000546152 PSME1Q06323 249 aa28.85■■■□□ 2.21
PRPF19-207ENST00000546152 TRPM1Q7Z4N2 1603 aa28.84■■■□□ 2.21
PRPF19-207ENST00000546152 NGLY1Q96IV0 654 aa28.84■■■□□ 2.21
PRPF19-207ENST00000546152 SBNO1A3KN83 1393 aa28.83■■■□□ 2.21
PRPF19-207ENST00000546152 TNS3Q68CZ2 1445 aa28.83■■■□□ 2.21
PRPF19-207ENST00000546152 CDK19Q9BWU1 502 aa28.82■■■□□ 2.2
PRPF19-207ENST00000546152 ATP7BP35670 1465 aa28.82■■■□□ 2.2
PRPF19-207ENST00000546152 NUDT16Q96DE0 195 aaKnown RBP28.81■■■□□ 2.2
PRPF19-207ENST00000546152 CENPJQ9HC77 1338 aaPredicted RBP28.79■■■□□ 2.2
PRPF19-207ENST00000546152 NBPF8Q3BBV2 869 aa28.79■■■□□ 2.2
PRPF19-207ENST00000546152 FNBP4Q8N3X1 1017 aaPredicted RBP28.78■■■□□ 2.2
PRPF19-207ENST00000546152 RXRBP28702 533 aa28.77■■■□□ 2.2
PRPF19-207ENST00000546152 QTRT2Q9H974 415 aaKnown RBP28.77■■■□□ 2.2
PRPF19-207ENST00000546152 TRPM3Q9HCF6 1732 aaPredicted RBP28.76■■■□□ 2.19
PRPF19-207ENST00000546152 ROCK2O75116 1388 aaKnown RBP28.75■■■□□ 2.19
PRPF19-207ENST00000546152 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
PRPF19-207ENST00000546152 ITSN1Q15811 1721 aa28.74■■■□□ 2.19
PRPF19-207ENST00000546152 MARF1Q9Y4F3 1742 aaKnown RBP28.74■■■□□ 2.19
PRPF19-207ENST00000546152 NGDNQ8NEJ9 315 aaKnown RBP28.74■■■□□ 2.19
PRPF19-207ENST00000546152 USP21Q9UK80 565 aa28.74■■■□□ 2.19
PRPF19-207ENST00000546152 ARHGEF10O15013 1369 aa28.74■■■□□ 2.19
PRPF19-207ENST00000546152 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
PRPF19-207ENST00000546152 TONSLQ96HA7 1378 aa28.73■■■□□ 2.19
PRPF19-207ENST00000546152 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
PRPF19-207ENST00000546152 CABLES1Q8TDN4 633 aa28.72■■■□□ 2.19
PRPF19-207ENST00000546152 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
PRPF19-207ENST00000546152 CCDC61Q9Y6R9 512 aa28.71■■■□□ 2.19
PRPF19-207ENST00000546152 CDK12Q9NYV4 1490 aaPredicted RBP28.7■■■□□ 2.18
PRPF19-207ENST00000546152 ALS2Q96Q42 1657 aa28.7■■■□□ 2.18
PRPF19-207ENST00000546152 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
PRPF19-207ENST00000546152 BCL9LQ86UU0 1499 aa28.69■■■□□ 2.18
PRPF19-207ENST00000546152 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
PRPF19-207ENST00000546152 PLEKHG3A1L390 1219 aa28.67■■■□□ 2.18
PRPF19-207ENST00000546152 PLEKHG5O94827 1062 aa28.67■■■□□ 2.18
PRPF19-207ENST00000546152 SRPK2P78362 688 aaKnown RBP28.67■■■□□ 2.18
PRPF19-207ENST00000546152 ABCA3Q99758 1704 aa28.66■■■□□ 2.18
PRPF19-207ENST00000546152 CABP2Q9NPB3 220 aa28.66■■■□□ 2.18
PRPF19-207ENST00000546152 TRPC5Q9UL62 973 aaPredicted RBP28.66■■■□□ 2.18
PRPF19-207ENST00000546152 ACEP12821 1306 aa28.66■■■□□ 2.18
PRPF19-207ENST00000546152 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
PRPF19-207ENST00000546152 ATRNO75882 1429 aa28.65■■■□□ 2.18
PRPF19-207ENST00000546152 SLIT2O94813 1529 aa28.64■■■□□ 2.17
PRPF19-207ENST00000546152 PAK3O75914 559 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms