RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DDX10Q13206 875 aaKnown RBP9.76□□□□□ -0.85
HMGCS2-204ENST00000544913 SIRT1Q96EB6 747 aa9.76□□□□□ -0.85
HMGCS2-204ENST00000544913 PRAM1Q96QH2 718 aa9.76□□□□□ -0.85
HMGCS2-204ENST00000544913 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
HMGCS2-204ENST00000544913 MIER1Q8N108 512 aa9.76□□□□□ -0.85
HMGCS2-204ENST00000544913 ADGRB2O60241 1585 aa9.75□□□□□ -0.85
HMGCS2-204ENST00000544913 WAPLQ7Z5K2 1190 aa9.75□□□□□ -0.85
HMGCS2-204ENST00000544913 STRCP1A6NGW2 1772 aa9.74□□□□□ -0.85
HMGCS2-204ENST00000544913 TMF1P82094 1093 aa9.74□□□□□ -0.85
HMGCS2-204ENST00000544913 KCNA6P17658 529 aa9.73□□□□□ -0.85
HMGCS2-204ENST00000544913 AMOTL2Q9Y2J4 779 aa9.73□□□□□ -0.85
HMGCS2-204ENST00000544913 SAFB2Q14151 953 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGCS2-204ENST00000544913 BCANQ96GW7 911 aa9.72□□□□□ -0.85
HMGCS2-204ENST00000544913 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.85
HMGCS2-204ENST00000544913 NALCNQ8IZF0 1738 aa9.71□□□□□ -0.86
HMGCS2-204ENST00000544913 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
HMGCS2-204ENST00000544913 CD163L1Q9NR16 1453 aa9.7□□□□□ -0.86
HMGCS2-204ENST00000544913 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
HMGCS2-204ENST00000544913 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
HMGCS2-204ENST00000544913 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
HMGCS2-204ENST00000544913 NKTRP30414 1462 aaKnown RBP9.69□□□□□ -0.86
HMGCS2-204ENST00000544913 ATP7BP35670 1465 aa9.69□□□□□ -0.86
HMGCS2-204ENST00000544913 POGKQ9P215 609 aa9.69□□□□□ -0.86
HMGCS2-204ENST00000544913 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
HMGCS2-204ENST00000544913 TOPAZ1Q8N9V7 1692 aa9.69□□□□□ -0.86
HMGCS2-204ENST00000544913 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
HMGCS2-204ENST00000544913 EVC2Q86UK5 1308 aa9.68□□□□□ -0.86
HMGCS2-204ENST00000544913 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
HMGCS2-204ENST00000544913 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 CDCA8Q53HL2 280 aa9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 POLR3GLQ9BT43 218 aa9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 ADGRL3Q9HAR2 1447 aa9.67□□□□□ -0.86
HMGCS2-204ENST00000544913 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
HMGCS2-204ENST00000544913 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
HMGCS2-204ENST00000544913 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
HMGCS2-204ENST00000544913 FMN2Q9NZ56 1722 aa9.66□□□□□ -0.86
HMGCS2-204ENST00000544913 PANK3Q9H999 370 aa9.66□□□□□ -0.86
HMGCS2-204ENST00000544913 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.86
HMGCS2-204ENST00000544913 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
HMGCS2-204ENST00000544913 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
HMGCS2-204ENST00000544913 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
HMGCS2-204ENST00000544913 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
HMGCS2-204ENST00000544913 ANKRD36BQ8N2N9 1353 aa9.64□□□□□ -0.87
HMGCS2-204ENST00000544913 CPSF1Q10570 1443 aaKnown RBP9.64□□□□□ -0.87
HMGCS2-204ENST00000544913 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
HMGCS2-204ENST00000544913 ZNF335Q9H4Z2 1342 aaPredicted RBP9.63□□□□□ -0.87
HMGCS2-204ENST00000544913 LRRC7Q96NW7 1537 aa9.63□□□□□ -0.87
HMGCS2-204ENST00000544913 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 PPIP5K1Q6PFW1 1433 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 NUDT16Q96DE0 195 aaKnown RBP9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 AKAP12Q02952 1782 aa9.62□□□□□ -0.87
HMGCS2-204ENST00000544913 MON2Q7Z3U7 1717 aa9.61□□□□□ -0.87
HMGCS2-204ENST00000544913 NSD3Q9BZ95 1437 aa9.61□□□□□ -0.87
HMGCS2-204ENST00000544913 NCOA3Q9Y6Q9 1424 aa9.61□□□□□ -0.87
HMGCS2-204ENST00000544913 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
HMGCS2-204ENST00000544913 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 LTBP4Q8N2S1 1624 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 ITSN1Q15811 1721 aa9.6□□□□□ -0.87
HMGCS2-204ENST00000544913 DCCP43146 1447 aa9.59□□□□□ -0.87
HMGCS2-204ENST00000544913 POLR3AO14802 1390 aaPredicted RBP9.59□□□□□ -0.87
HMGCS2-204ENST00000544913 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
HMGCS2-204ENST00000544913 TMC1Q8TDI8 760 aa9.59□□□□□ -0.87
HMGCS2-204ENST00000544913 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
HMGCS2-204ENST00000544913 MST1RQ04912 1400 aa9.58□□□□□ -0.88
HMGCS2-204ENST00000544913 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
HMGCS2-204ENST00000544913 ANP32CO43423 234 aa9.58□□□□□ -0.88
HMGCS2-204ENST00000544913 C1orf167Q5SNV9 1468 aa9.57□□□□□ -0.88
HMGCS2-204ENST00000544913 USP6P35125 1406 aa9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 DMRT2Q9Y5R5 561 aa9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 ANKRD26Q9UPS8 1709 aa9.56□□□□□ -0.88
HMGCS2-204ENST00000544913 ACEP12821 1306 aa9.55□□□□□ -0.88
HMGCS2-204ENST00000544913 CC2D1BQ5T0F9 858 aaKnown RBP9.55□□□□□ -0.88
HMGCS2-204ENST00000544913 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
HMGCS2-204ENST00000544913 KIF20BQ96Q89 1820 aa9.55□□□□□ -0.88
HMGCS2-204ENST00000544913 MARF1Q9Y4F3 1742 aaKnown RBP9.55□□□□□ -0.88
HMGCS2-204ENST00000544913 FYB1O15117 783 aa9.54□□□□□ -0.88
HMGCS2-204ENST00000544913 TERF2IPQ9NYB0 399 aa9.54□□□□□ -0.88
HMGCS2-204ENST00000544913 NSD2O96028 1365 aa9.54□□□□□ -0.88
HMGCS2-204ENST00000544913 RALBP1Q15311 655 aa9.54□□□□□ -0.88
HMGCS2-204ENST00000544913 PIK3C2AO00443 1686 aa9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 OVOS2A0A0J9YW53 1432 aa9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 OVOS2Q6IE36 1432 aa9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 USP54Q70EL1 1684 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms