RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 DDX17Q92841 729 aaKnown RBP27.32■■□□□ 1.96
TMED3-204ENST00000543455 LRP6O75581 1613 aa27.32■■□□□ 1.96
TMED3-204ENST00000543455 DHX57Q6P158 1386 aaKnown RBP27.31■■□□□ 1.96
TMED3-204ENST00000543455 ADGRB1O14514 1584 aa27.3■■□□□ 1.96
TMED3-204ENST00000543455 ORAI2Q96SN7 254 aa27.29■■□□□ 1.96
TMED3-204ENST00000543455 DCAF11Q8TEB1 546 aa27.25■■□□□ 1.95
TMED3-204ENST00000543455 SPATA31A6Q5VVP1 1343 aa27.25■■□□□ 1.95
TMED3-204ENST00000543455 SIRT1Q96EB6 747 aa27.25■■□□□ 1.95
TMED3-204ENST00000543455 KDM2AQ9Y2K7 1162 aa27.25■■□□□ 1.95
TMED3-204ENST00000543455 FMN2Q9NZ56 1722 aa27.24■■□□□ 1.95
TMED3-204ENST00000543455 DLC1Q96QB1 1528 aa27.22■■□□□ 1.95
TMED3-204ENST00000543455 POTEAQ6S8J7 498 aa27.2■■□□□ 1.95
TMED3-204ENST00000543455 PNPLA6Q8IY17 1366 aa27.19■■□□□ 1.94
TMED3-204ENST00000543455 SOS2Q07890 1332 aaPredicted RBP27.18■■□□□ 1.94
TMED3-204ENST00000543455 LRRC59Q96AG4 307 aaKnown RBP27.18■■□□□ 1.94
TMED3-204ENST00000543455 STAC3Q96MF2 364 aa27.17■■□□□ 1.94
TMED3-204ENST00000543455 NUTM2FA1L443 756 aa27.16■■□□□ 1.94
TMED3-204ENST00000543455 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
TMED3-204ENST00000543455 RGPD8O14715 1765 aaPredicted RBP27.15■■□□□ 1.94
TMED3-204ENST00000543455 ESCO1Q5FWF5 840 aa27.14■■□□□ 1.94
TMED3-204ENST00000543455 PXDNQ92626 1479 aa27.14■■□□□ 1.93
TMED3-204ENST00000543455 SAFB2Q14151 953 aaKnown RBP eCLIP27.13■■□□□ 1.93
TMED3-204ENST00000543455 NUTM2BA6NNL0 878 aaPredicted RBP27.12■■□□□ 1.93
TMED3-204ENST00000543455 NUTM2EB1AL46 878 aaPredicted RBP27.12■■□□□ 1.93
TMED3-204ENST00000543455 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
TMED3-204ENST00000543455 TRAK1Q9UPV9 953 aa27.12■■□□□ 1.93
TMED3-204ENST00000543455 ADGRB2O60241 1585 aa27.12■■□□□ 1.93
TMED3-204ENST00000543455 ARHGEF28Q8N1W1 1705 aaKnown RBP27.1■■□□□ 1.93
TMED3-204ENST00000543455 USP32Q8NFA0 1604 aa27.09■■□□□ 1.93
TMED3-204ENST00000543455 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
TMED3-204ENST00000543455 KIF1AQ12756 1690 aa27.08■■□□□ 1.93
TMED3-204ENST00000543455 COL22A1Q8NFW1 1626 aaPredicted RBP27.08■■□□□ 1.93
TMED3-204ENST00000543455 NPHP3Q7Z494 1330 aa27.07■■□□□ 1.92
TMED3-204ENST00000543455 FOXO3O43524 673 aa27.07■■□□□ 1.92
TMED3-204ENST00000543455 MEX3CQ5U5Q3 659 aaKnown RBP27.07■■□□□ 1.92
TMED3-204ENST00000543455 POGKQ9P215 609 aa27.06■■□□□ 1.92
TMED3-204ENST00000543455 XPCQ01831 940 aaPredicted RBP27.06■■□□□ 1.92
TMED3-204ENST00000543455 SIN3AQ96ST3 1273 aa27.03■■□□□ 1.92
TMED3-204ENST00000543455 HIRIP3Q9BW71 556 aaPredicted RBP27.01■■□□□ 1.91
TMED3-204ENST00000543455 MINK1Q8N4C8 1332 aaPredicted RBP27.01■■□□□ 1.91
TMED3-204ENST00000543455 NBPF1Q3BBV0 1214 aa27■■□□□ 1.91
TMED3-204ENST00000543455 ANKARQ7Z5J8 1434 aa26.99■■□□□ 1.91
TMED3-204ENST00000543455 AFF2P51816 1311 aa26.98■■□□□ 1.91
TMED3-204ENST00000543455 ZNF772Q68DY9 489 aaPredicted RBP26.98■■□□□ 1.91
TMED3-204ENST00000543455 L3MBTL2Q969R5 705 aa26.98■■□□□ 1.91
TMED3-204ENST00000543455 PHF8Q9UPP1 1060 aa26.98■■□□□ 1.91
TMED3-204ENST00000543455 PRR36Q9H6K5 1346 aa26.97■■□□□ 1.91
TMED3-204ENST00000543455 TULP4Q9NRJ4 1543 aa26.96■■□□□ 1.91
TMED3-204ENST00000543455 C8orf37Q96NL8 207 aa26.95■■□□□ 1.91
TMED3-204ENST00000543455 ADAMTS2O95450 1211 aa26.94■■□□□ 1.9
TMED3-204ENST00000543455 SPATA31A3Q5VYP0 1347 aa26.94■■□□□ 1.9
TMED3-204ENST00000543455 KRT28Q7Z3Y7 464 aa26.93■■□□□ 1.9
TMED3-204ENST00000543455 WASLO00401 505 aaPredicted RBP26.93■■□□□ 1.9
TMED3-204ENST00000543455 MARF1Q9Y4F3 1742 aaKnown RBP26.92■■□□□ 1.9
TMED3-204ENST00000543455 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
TMED3-204ENST00000543455 PMFBP1Q8TBY8 1022 aa26.9■■□□□ 1.9
TMED3-204ENST00000543455 TRPM3Q9HCF6 1732 aaPredicted RBP26.9■■□□□ 1.9
TMED3-204ENST00000543455 TRIM26Q12899 539 aaPredicted RBP26.89■■□□□ 1.9
TMED3-204ENST00000543455 TRPM1Q7Z4N2 1603 aa26.89■■□□□ 1.9
TMED3-204ENST00000543455 ATP7BP35670 1465 aa26.88■■□□□ 1.89
TMED3-204ENST00000543455 TNS3Q68CZ2 1445 aa26.88■■□□□ 1.89
TMED3-204ENST00000543455 EIF3AQ14152 1382 aaKnown RBP26.88■■□□□ 1.89
TMED3-204ENST00000543455 SBNO1A3KN83 1393 aa26.87■■□□□ 1.89
TMED3-204ENST00000543455 NGLY1Q96IV0 654 aa26.87■■□□□ 1.89
TMED3-204ENST00000543455 ABCA3Q99758 1704 aa26.85■■□□□ 1.89
TMED3-204ENST00000543455 ITSN1Q15811 1721 aa26.84■■□□□ 1.89
TMED3-204ENST00000543455 FNBP4Q8N3X1 1017 aaPredicted RBP26.84■■□□□ 1.89
TMED3-204ENST00000543455 TOPAZ1Q8N9V7 1692 aa26.83■■□□□ 1.89
TMED3-204ENST00000543455 ALS2Q96Q42 1657 aa26.83■■□□□ 1.89
TMED3-204ENST00000543455 RXRBP28702 533 aa26.83■■□□□ 1.89
TMED3-204ENST00000543455 CDK12Q9NYV4 1490 aaPredicted RBP26.82■■□□□ 1.88
TMED3-204ENST00000543455 PSME1Q06323 249 aa26.82■■□□□ 1.88
TMED3-204ENST00000543455 QTRT2Q9H974 415 aaKnown RBP26.82■■□□□ 1.88
TMED3-204ENST00000543455 CDK19Q9BWU1 502 aa26.81■■□□□ 1.88
TMED3-204ENST00000543455 QRICH2Q9H0J4 1663 aa26.81■■□□□ 1.88
TMED3-204ENST00000543455 NUDT16Q96DE0 195 aaKnown RBP26.81■■□□□ 1.88
TMED3-204ENST00000543455 BCL9LQ86UU0 1499 aa26.79■■□□□ 1.88
TMED3-204ENST00000543455 NBPF8Q3BBV2 869 aa26.78■■□□□ 1.88
TMED3-204ENST00000543455 CABLES1Q8TDN4 633 aa26.78■■□□□ 1.88
TMED3-204ENST00000543455 USP21Q9UK80 565 aa26.78■■□□□ 1.88
TMED3-204ENST00000543455 RGS12O14924 1447 aa26.78■■□□□ 1.88
TMED3-204ENST00000543455 ATRNO75882 1429 aa26.78■■□□□ 1.88
TMED3-204ENST00000543455 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
TMED3-204ENST00000543455 ARHGEF10O15013 1369 aa26.76■■□□□ 1.87
TMED3-204ENST00000543455 RBM6P78332 1123 aaKnown RBP26.75■■□□□ 1.87
TMED3-204ENST00000543455 CRYBG1Q9Y4K1 1723 aa26.75■■□□□ 1.87
TMED3-204ENST00000543455 GPRASP1Q5JY77 1395 aa26.75■■□□□ 1.87
TMED3-204ENST00000543455 SLIT2O94813 1529 aa26.75■■□□□ 1.87
TMED3-204ENST00000543455 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.74■■□□□ 1.87
TMED3-204ENST00000543455 LMOD2Q6P5Q4 547 aa26.73■■□□□ 1.87
TMED3-204ENST00000543455 NGDNQ8NEJ9 315 aaKnown RBP26.73■■□□□ 1.87
TMED3-204ENST00000543455 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
TMED3-204ENST00000543455 POLR3AO14802 1390 aaPredicted RBP26.72■■□□□ 1.87
TMED3-204ENST00000543455 ROCK2O75116 1388 aaKnown RBP26.72■■□□□ 1.87
TMED3-204ENST00000543455 PLEKHG5O94827 1062 aa26.71■■□□□ 1.87
TMED3-204ENST00000543455 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.86
TMED3-204ENST00000543455 CCDC61Q9Y6R9 512 aa26.69■■□□□ 1.86
TMED3-204ENST00000543455 PLEKHG3A1L390 1219 aa26.68■■□□□ 1.86
TMED3-204ENST00000543455 ACEP12821 1306 aa26.68■■□□□ 1.86
TMED3-204ENST00000543455 CABP2Q9NPB3 220 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms