RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 HRCP23327 699 aa11.39□□□□□ -0.59
NECAP1-205ENST00000541948 CFAP70Q5T0N1 1121 aa11.39□□□□□ -0.59
NECAP1-205ENST00000541948 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
NECAP1-205ENST00000541948 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
NECAP1-205ENST00000541948 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
NECAP1-205ENST00000541948 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
NECAP1-205ENST00000541948 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
NECAP1-205ENST00000541948 STK26Q9P289 416 aa11.38□□□□□ -0.59
NECAP1-205ENST00000541948 ABCC11Q96J66 1382 aa11.38□□□□□ -0.59
NECAP1-205ENST00000541948 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
NECAP1-205ENST00000541948 JCADQ9P266 1359 aa11.37□□□□□ -0.59
NECAP1-205ENST00000541948 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
NECAP1-205ENST00000541948 RGPD8O14715 1765 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-205ENST00000541948 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
NECAP1-205ENST00000541948 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
NECAP1-205ENST00000541948 SPATA31A6Q5VVP1 1343 aa11.33□□□□□ -0.6
NECAP1-205ENST00000541948 PXDNQ92626 1479 aa11.32□□□□□ -0.6
NECAP1-205ENST00000541948 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
NECAP1-205ENST00000541948 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
NECAP1-205ENST00000541948 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
NECAP1-205ENST00000541948 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
NECAP1-205ENST00000541948 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-205ENST00000541948 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
NECAP1-205ENST00000541948 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
NECAP1-205ENST00000541948 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
NECAP1-205ENST00000541948 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-205ENST00000541948 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
NECAP1-205ENST00000541948 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
NECAP1-205ENST00000541948 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-205ENST00000541948 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
NECAP1-205ENST00000541948 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-205ENST00000541948 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-205ENST00000541948 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-205ENST00000541948 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
NECAP1-205ENST00000541948 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-205ENST00000541948 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
NECAP1-205ENST00000541948 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
NECAP1-205ENST00000541948 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
NECAP1-205ENST00000541948 FOXO3O43524 673 aa11.26□□□□□ -0.61
NECAP1-205ENST00000541948 NBPF1Q3BBV0 1214 aa11.26□□□□□ -0.61
NECAP1-205ENST00000541948 LRRC59Q96AG4 307 aaKnown RBP11.26□□□□□ -0.61
NECAP1-205ENST00000541948 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
NECAP1-205ENST00000541948 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
NECAP1-205ENST00000541948 TRPM3Q9HCF6 1732 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-205ENST00000541948 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
NECAP1-205ENST00000541948 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-205ENST00000541948 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
NECAP1-205ENST00000541948 AFF2P51816 1311 aa11.22□□□□□ -0.61
NECAP1-205ENST00000541948 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
NECAP1-205ENST00000541948 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
NECAP1-205ENST00000541948 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
NECAP1-205ENST00000541948 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
NECAP1-205ENST00000541948 TULP4Q9NRJ4 1543 aa11.21□□□□□ -0.61
NECAP1-205ENST00000541948 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
NECAP1-205ENST00000541948 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
NECAP1-205ENST00000541948 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.62
NECAP1-205ENST00000541948 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 ALS2Q96Q42 1657 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 ATP7BP35670 1465 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-205ENST00000541948 ANKARQ7Z5J8 1434 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 POGKQ9P215 609 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
NECAP1-205ENST00000541948 KRT28Q7Z3Y7 464 aa11.19□□□□□ -0.62
NECAP1-205ENST00000541948 PMFBP1Q8TBY8 1022 aa11.19□□□□□ -0.62
NECAP1-205ENST00000541948 C8orf37Q96NL8 207 aa11.19□□□□□ -0.62
NECAP1-205ENST00000541948 BCL9LQ86UU0 1499 aa11.19□□□□□ -0.62
NECAP1-205ENST00000541948 WASLO00401 505 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-205ENST00000541948 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
NECAP1-205ENST00000541948 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
NECAP1-205ENST00000541948 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
NECAP1-205ENST00000541948 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
NECAP1-205ENST00000541948 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
NECAP1-205ENST00000541948 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
NECAP1-205ENST00000541948 RGS12O14924 1447 aa11.17□□□□□ -0.62
NECAP1-205ENST00000541948 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
NECAP1-205ENST00000541948 RXRBP28702 533 aa11.16□□□□□ -0.62
NECAP1-205ENST00000541948 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-205ENST00000541948 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
NECAP1-205ENST00000541948 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
NECAP1-205ENST00000541948 ATRNO75882 1429 aa11.15□□□□□ -0.62
NECAP1-205ENST00000541948 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.63
NECAP1-205ENST00000541948 SBNO1A3KN83 1393 aa11.15□□□□□ -0.63
NECAP1-205ENST00000541948 SLIT2O94813 1529 aa11.14□□□□□ -0.63
NECAP1-205ENST00000541948 NUDT16Q96DE0 195 aaKnown RBP11.14□□□□□ -0.63
NECAP1-205ENST00000541948 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
NECAP1-205ENST00000541948 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
NECAP1-205ENST00000541948 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
NECAP1-205ENST00000541948 GLI3P10071 1580 aa11.14□□□□□ -0.63
NECAP1-205ENST00000541948 NRAPQ86VF7 1730 aa11.13□□□□□ -0.63
NECAP1-205ENST00000541948 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
NECAP1-205ENST00000541948 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-205ENST00000541948 USP21Q9UK80 565 aa11.13□□□□□ -0.63
NECAP1-205ENST00000541948 PHRF1Q9P1Y6 1649 aaKnown RBP11.12□□□□□ -0.63
NECAP1-205ENST00000541948 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
NECAP1-205ENST00000541948 PSME1Q06323 249 aa11.11□□□□□ -0.63
NECAP1-205ENST00000541948 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-205ENST00000541948 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms