RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PLEKHH2Q8IVE3 1493 aa7.65□□□□□ -1.18
CHD4-206ENST00000536999 STAC3Q96MF2 364 aa7.65□□□□□ -1.18
CHD4-206ENST00000536999 ABCC3O15438 1527 aa7.64□□□□□ -1.19
CHD4-206ENST00000536999 NKTRP30414 1462 aaKnown RBP7.64□□□□□ -1.19
CHD4-206ENST00000536999 KIAA1107Q9UPP5 1409 aa7.64□□□□□ -1.19
CHD4-206ENST00000536999 KIF7Q2M1P5 1343 aa7.64□□□□□ -1.19
CHD4-206ENST00000536999 MYBBP1AQ9BQG0 1328 aaKnown RBP7.64□□□□□ -1.19
CHD4-206ENST00000536999 SF3B2Q13435 895 aaKnown RBP7.64□□□□□ -1.19
CHD4-206ENST00000536999 SLC26A8Q96RN1 970 aa7.64□□□□□ -1.19
CHD4-206ENST00000536999 HIRIP3Q9BW71 556 aaPredicted RBP7.64□□□□□ -1.19
CHD4-206ENST00000536999 AHDC1Q5TGY3 1603 aaPredicted RBP7.63□□□□□ -1.19
CHD4-206ENST00000536999 EP400Q96L91 3159 aa7.63□□□□□ -1.19
CHD4-206ENST00000536999 PSDA5PKW4 1024 aaPredicted RBP7.63□□□□□ -1.19
CHD4-206ENST00000536999 NLRP13Q86W25 1043 aa7.63□□□□□ -1.19
CHD4-206ENST00000536999 PNISRQ8TF01 805 aaKnown RBP7.63□□□□□ -1.19
CHD4-206ENST00000536999 CFDP1Q9UEE9 299 aaPredicted RBP7.63□□□□□ -1.19
CHD4-206ENST00000536999 CDC42BPAQ5VT25 1732 aa7.63□□□□□ -1.19
CHD4-206ENST00000536999 SLIT1O75093 1534 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 DEFB132Q7Z7B7 95 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 STAG3Q9UJ98 1225 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 TRPC5Q9UL62 973 aaPredicted RBP7.62□□□□□ -1.19
CHD4-206ENST00000536999 NHSL1Q5SYE7 1610 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 ERVK-7P63135 1459 aa7.62□□□□□ -1.19
CHD4-206ENST00000536999 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
CHD4-206ENST00000536999 UBR1Q8IWV7 1749 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 ADAMTS2O95450 1211 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 ATF3P18847 181 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 CADPS2Q86UW7 1296 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 RRP7BPQ9NSQ0 103 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 USP21Q9UK80 565 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 RCAN3Q9UKA8 241 aa7.61□□□□□ -1.19
CHD4-206ENST00000536999 KDM5AP29375 1690 aaKnown RBP7.6□□□□□ -1.19
CHD4-206ENST00000536999 LRPPRCP42704 1394 aaKnown RBP7.6□□□□□ -1.19
CHD4-206ENST00000536999 USP47Q96K76 1375 aa7.6□□□□□ -1.19
CHD4-206ENST00000536999 RRP1P56182 461 aaKnown RBP7.6□□□□□ -1.19
CHD4-206ENST00000536999 BACH2Q9BYV9 841 aa7.6□□□□□ -1.19
CHD4-206ENST00000536999 SPINK5Q9NQ38 1064 aaPredicted RBP7.6□□□□□ -1.19
CHD4-206ENST00000536999 RTEL1-TNFRSF6BF6WH68 1400 aa7.6□□□□□ -1.19
CHD4-206ENST00000536999 DAPK1P53355 1430 aa7.6□□□□□ -1.19
CHD4-206ENST00000536999 TMEM2Q9UHN6 1383 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 DIP2AQ14689 1571 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 GPATCH8Q9UKJ3 1502 aaKnown RBP7.59□□□□□ -1.19
CHD4-206ENST00000536999 NEFMP07197 916 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 PDE4AP27815 886 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 IRX6P78412 446 aaPredicted RBP7.59□□□□□ -1.19
CHD4-206ENST00000536999 NBR1Q14596 966 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 GLIPR1L2Q4G1C9 344 aa7.59□□□□□ -1.19
CHD4-206ENST00000536999 LRRC59Q96AG4 307 aaKnown RBP7.59□□□□□ -1.19
CHD4-206ENST00000536999 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
CHD4-206ENST00000536999 EIF5BO60841 1220 aaKnown RBP7.58□□□□□ -1.2
CHD4-206ENST00000536999 CAPN15O75808 1086 aa7.58□□□□□ -1.2
CHD4-206ENST00000536999 BRINP3Q76B58 766 aa7.58□□□□□ -1.2
CHD4-206ENST00000536999 CENPQQ7L2Z9 268 aaPredicted RBP7.58□□□□□ -1.2
CHD4-206ENST00000536999 RSPH6AQ9H0K4 717 aa7.58□□□□□ -1.2
CHD4-206ENST00000536999 ADGRL2O95490 1459 aa7.57□□□□□ -1.2
CHD4-206ENST00000536999 TSPY4P0CV99 314 aa7.57□□□□□ -1.2
CHD4-206ENST00000536999 TSPY10P0CW01 314 aa7.57□□□□□ -1.2
CHD4-206ENST00000536999 BECN1Q14457 450 aa7.57□□□□□ -1.2
CHD4-206ENST00000536999 GSE1Q14687 1217 aa7.57□□□□□ -1.2
CHD4-206ENST00000536999 SAMD1Q6SPF0 538 aaPredicted RBP7.57□□□□□ -1.2
CHD4-206ENST00000536999 RALGAPBQ86X10 1494 aa7.56□□□□□ -1.2
CHD4-206ENST00000536999 L1TD1Q5T7N2 865 aaKnown RBP7.56□□□□□ -1.2
CHD4-206ENST00000536999 CARD11Q9BXL7 1154 aa7.56□□□□□ -1.2
CHD4-206ENST00000536999 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
CHD4-206ENST00000536999 PNPLA6Q8IY17 1366 aa7.56□□□□□ -1.2
CHD4-206ENST00000536999 LRRIQ1Q96JM4 1722 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 ABCC5O15440 1437 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 ATRNO75882 1429 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 NCOA3Q9Y6Q9 1424 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 NINLQ9Y2I6 1382 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 BCL9LQ86UU0 1499 aa7.55□□□□□ -1.2
CHD4-206ENST00000536999 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
CHD4-206ENST00000536999 ZNF644Q9H582 1327 aaPredicted RBP7.54□□□□□ -1.2
CHD4-206ENST00000536999 CCDC144AA2RUR9 1427 aa7.54□□□□□ -1.2
CHD4-206ENST00000536999 R3HDM1Q15032 1099 aaKnown RBP7.54□□□□□ -1.2
CHD4-206ENST00000536999 FAM161AQ3B820 660 aa7.54□□□□□ -1.2
CHD4-206ENST00000536999 ZNF784Q8NCA9 323 aaPredicted RBP7.54□□□□□ -1.2
CHD4-206ENST00000536999 UPF2Q9HAU5 1272 aaKnown RBP7.54□□□□□ -1.2
CHD4-206ENST00000536999 ISY1Q9ULR0 285 aaKnown RBP7.54□□□□□ -1.2
CHD4-206ENST00000536999 MBD5Q9P267 1494 aa7.54□□□□□ -1.2
CHD4-206ENST00000536999 TET3O43151 1660 aa7.54□□□□□ -1.2
CHD4-206ENST00000536999 ASXL1Q8IXJ9 1541 aa7.53□□□□□ -1.2
CHD4-206ENST00000536999 BAG6P46379 1132 aa7.53□□□□□ -1.2
CHD4-206ENST00000536999 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
CHD4-206ENST00000536999 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
CHD4-206ENST00000536999 ATF5Q9Y2D1 282 aaPredicted RBP7.53□□□□□ -1.2
CHD4-206ENST00000536999 EFCAB6Q5THR3 1501 aa7.52□□□□□ -1.2
CHD4-206ENST00000536999 MROH1Q8NDA8 1641 aa7.52□□□□□ -1.2
CHD4-206ENST00000536999 CFAP65Q6ZU64 1925 aaKnown RBP7.52□□□□□ -1.2
CHD4-206ENST00000536999 CAMSAP2Q08AD1 1489 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 PAK3O75914 559 aaPredicted RBP7.52□□□□□ -1.21
CHD4-206ENST00000536999 PTMSP20962 102 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 TMF1P82094 1093 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 FAM43AQ8N2R8 423 aa7.52□□□□□ -1.21
CHD4-206ENST00000536999 GJD4Q96KN9 370 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms