RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
TNFRSF1A-209ENST00000536717 KDM2AQ9Y2K7 1162 aa26.09■■□□□ 1.77
TNFRSF1A-209ENST00000536717 ADGRB1O14514 1584 aa26.08■■□□□ 1.77
TNFRSF1A-209ENST00000536717 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
TNFRSF1A-209ENST00000536717 DDX17Q92841 729 aaKnown RBP26.05■■□□□ 1.76
TNFRSF1A-209ENST00000536717 SIRT1Q96EB6 747 aa26.05■■□□□ 1.76
TNFRSF1A-209ENST00000536717 FMN2Q9NZ56 1722 aa26.04■■□□□ 1.76
TNFRSF1A-209ENST00000536717 ORAI2Q96SN7 254 aa26.04■■□□□ 1.76
TNFRSF1A-209ENST00000536717 RGS17Q9UGC6 210 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF1A-209ENST00000536717 DLC1Q96QB1 1528 aa26.02■■□□□ 1.76
TNFRSF1A-209ENST00000536717 LRP6O75581 1613 aa26.01■■□□□ 1.75
TNFRSF1A-209ENST00000536717 RGPD8O14715 1765 aaPredicted RBP26■■□□□ 1.75
TNFRSF1A-209ENST00000536717 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
TNFRSF1A-209ENST00000536717 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
TNFRSF1A-209ENST00000536717 SOCS7O14512 581 aa25.97■■□□□ 1.75
TNFRSF1A-209ENST00000536717 PRAM1Q96QH2 718 aa25.97■■□□□ 1.75
TNFRSF1A-209ENST00000536717 KIAA1210Q9ULL0 1709 aa25.96■■□□□ 1.75
TNFRSF1A-209ENST00000536717 LRRC59Q96AG4 307 aaKnown RBP25.96■■□□□ 1.75
TNFRSF1A-209ENST00000536717 NUTM2FA1L443 756 aa25.95■■□□□ 1.74
TNFRSF1A-209ENST00000536717 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.74
TNFRSF1A-209ENST00000536717 ESCO1Q5FWF5 840 aa25.94■■□□□ 1.74
TNFRSF1A-209ENST00000536717 ARHGEF28Q8N1W1 1705 aaKnown RBP25.94■■□□□ 1.74
TNFRSF1A-209ENST00000536717 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
TNFRSF1A-209ENST00000536717 TRAK1Q9UPV9 953 aa25.93■■□□□ 1.74
TNFRSF1A-209ENST00000536717 PNPLA6Q8IY17 1366 aa25.92■■□□□ 1.74
TNFRSF1A-209ENST00000536717 ADGRB2O60241 1585 aa25.92■■□□□ 1.74
TNFRSF1A-209ENST00000536717 POGKQ9P215 609 aa25.91■■□□□ 1.74
TNFRSF1A-209ENST00000536717 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
TNFRSF1A-209ENST00000536717 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
TNFRSF1A-209ENST00000536717 PXDNQ92626 1479 aa25.89■■□□□ 1.73
TNFRSF1A-209ENST00000536717 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
TNFRSF1A-209ENST00000536717 USP32Q8NFA0 1604 aa25.88■■□□□ 1.73
TNFRSF1A-209ENST00000536717 POTEAQ6S8J7 498 aa25.88■■□□□ 1.73
TNFRSF1A-209ENST00000536717 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF1A-209ENST00000536717 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF1A-209ENST00000536717 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF1A-209ENST00000536717 FOXO3O43524 673 aa25.86■■□□□ 1.73
TNFRSF1A-209ENST00000536717 MEX3CQ5U5Q3 659 aaKnown RBP25.85■■□□□ 1.73
TNFRSF1A-209ENST00000536717 COL22A1Q8NFW1 1626 aaPredicted RBP25.85■■□□□ 1.73
TNFRSF1A-209ENST00000536717 L3MBTL2Q969R5 705 aa25.83■■□□□ 1.73
TNFRSF1A-209ENST00000536717 HIRIP3Q9BW71 556 aaPredicted RBP25.83■■□□□ 1.72
TNFRSF1A-209ENST00000536717 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF1A-209ENST00000536717 NBPF1Q3BBV0 1214 aa25.82■■□□□ 1.72
TNFRSF1A-209ENST00000536717 MINK1Q8N4C8 1332 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF1A-209ENST00000536717 NEUROD1Q13562 356 aa25.8■■□□□ 1.72
TNFRSF1A-209ENST00000536717 ANKARQ7Z5J8 1434 aa25.8■■□□□ 1.72
TNFRSF1A-209ENST00000536717 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
TNFRSF1A-209ENST00000536717 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
TNFRSF1A-209ENST00000536717 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
TNFRSF1A-209ENST00000536717 WASLO00401 505 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF1A-209ENST00000536717 PRR36Q9H6K5 1346 aa25.75■■□□□ 1.71
TNFRSF1A-209ENST00000536717 MARF1Q9Y4F3 1742 aaKnown RBP25.75■■□□□ 1.71
TNFRSF1A-209ENST00000536717 ZNF772Q68DY9 489 aaPredicted RBP25.74■■□□□ 1.71
TNFRSF1A-209ENST00000536717 KRT28Q7Z3Y7 464 aa25.73■■□□□ 1.71
TNFRSF1A-209ENST00000536717 EIF3AQ14152 1382 aaKnown RBP25.73■■□□□ 1.71
TNFRSF1A-209ENST00000536717 AFF2P51816 1311 aa25.73■■□□□ 1.71
TNFRSF1A-209ENST00000536717 ITSN1Q15811 1721 aa25.73■■□□□ 1.71
TNFRSF1A-209ENST00000536717 SPATA31A3Q5VYP0 1347 aa25.72■■□□□ 1.71
TNFRSF1A-209ENST00000536717 ADAMTS2O95450 1211 aa25.72■■□□□ 1.71
TNFRSF1A-209ENST00000536717 C8orf37Q96NL8 207 aa25.72■■□□□ 1.71
TNFRSF1A-209ENST00000536717 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
TNFRSF1A-209ENST00000536717 TRPM3Q9HCF6 1732 aaPredicted RBP25.69■■□□□ 1.7
TNFRSF1A-209ENST00000536717 ATP7BP35670 1465 aa25.69■■□□□ 1.7
TNFRSF1A-209ENST00000536717 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
TNFRSF1A-209ENST00000536717 QRICH2Q9H0J4 1663 aa25.68■■□□□ 1.7
TNFRSF1A-209ENST00000536717 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
TNFRSF1A-209ENST00000536717 TOPAZ1Q8N9V7 1692 aa25.66■■□□□ 1.7
TNFRSF1A-209ENST00000536717 PSME1Q06323 249 aa25.66■■□□□ 1.7
TNFRSF1A-209ENST00000536717 ABCA3Q99758 1704 aa25.65■■□□□ 1.7
TNFRSF1A-209ENST00000536717 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
TNFRSF1A-209ENST00000536717 CDK19Q9BWU1 502 aa25.64■■□□□ 1.7
TNFRSF1A-209ENST00000536717 ALS2Q96Q42 1657 aa25.63■■□□□ 1.69
TNFRSF1A-209ENST00000536717 CENPJQ9HC77 1338 aaPredicted RBP25.63■■□□□ 1.69
TNFRSF1A-209ENST00000536717 NBPF8Q3BBV2 869 aa25.63■■□□□ 1.69
TNFRSF1A-209ENST00000536717 NUDT16Q96DE0 195 aaKnown RBP25.63■■□□□ 1.69
TNFRSF1A-209ENST00000536717 ROCK2O75116 1388 aaKnown RBP25.61■■□□□ 1.69
TNFRSF1A-209ENST00000536717 FNBP4Q8N3X1 1017 aaPredicted RBP25.6■■□□□ 1.69
TNFRSF1A-209ENST00000536717 RXRBP28702 533 aa25.59■■□□□ 1.69
TNFRSF1A-209ENST00000536717 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
TNFRSF1A-209ENST00000536717 ARHGEF10O15013 1369 aa25.58■■□□□ 1.69
TNFRSF1A-209ENST00000536717 GPRASP1Q5JY77 1395 aa25.58■■□□□ 1.69
TNFRSF1A-209ENST00000536717 TONSLQ96HA7 1378 aa25.58■■□□□ 1.69
TNFRSF1A-209ENST00000536717 NGDNQ8NEJ9 315 aaKnown RBP25.58■■□□□ 1.68
TNFRSF1A-209ENST00000536717 USP21Q9UK80 565 aa25.57■■□□□ 1.68
TNFRSF1A-209ENST00000536717 CDK12Q9NYV4 1490 aaPredicted RBP25.56■■□□□ 1.68
TNFRSF1A-209ENST00000536717 LMOD2Q6P5Q4 547 aa25.56■■□□□ 1.68
TNFRSF1A-209ENST00000536717 CABLES1Q8TDN4 633 aa25.56■■□□□ 1.68
TNFRSF1A-209ENST00000536717 CCDC61Q9Y6R9 512 aa25.55■■□□□ 1.68
TNFRSF1A-209ENST00000536717 BCL9LQ86UU0 1499 aa25.55■■□□□ 1.68
TNFRSF1A-209ENST00000536717 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.55■■□□□ 1.68
TNFRSF1A-209ENST00000536717 CRYBG1Q9Y4K1 1723 aa25.55■■□□□ 1.68
TNFRSF1A-209ENST00000536717 POLR3AO14802 1390 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF1A-209ENST00000536717 RBM6P78332 1123 aaKnown RBP25.53■■□□□ 1.68
TNFRSF1A-209ENST00000536717 ATRNO75882 1429 aa25.52■■□□□ 1.68
TNFRSF1A-209ENST00000536717 SLIT2O94813 1529 aa25.51■■□□□ 1.67
TNFRSF1A-209ENST00000536717 RALGAPBQ86X10 1494 aa25.51■■□□□ 1.67
TNFRSF1A-209ENST00000536717 PLEKHG3A1L390 1219 aa25.51■■□□□ 1.67
TNFRSF1A-209ENST00000536717 PLEKHG5O94827 1062 aa25.51■■□□□ 1.67
TNFRSF1A-209ENST00000536717 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
TNFRSF1A-209ENST00000536717 CABP2Q9NPB3 220 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 1020.9 ms