RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 NEFMP07197 916 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 PTMSP20962 102 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 HNRNPMP52272 730 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP30-208ENST00000536393 GSE1Q14687 1217 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 CHMP4BQ9H444 224 aaKnown RBP8.6□□□□□ -1.03
USP30-208ENST00000536393 UPF2Q9HAU5 1272 aaKnown RBP8.6□□□□□ -1.03
USP30-208ENST00000536393 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 ABCA9Q8IUA7 1624 aa8.59□□□□□ -1.03
USP30-208ENST00000536393 WDR63Q8IWG1 891 aa8.59□□□□□ -1.03
USP30-208ENST00000536393 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
USP30-208ENST00000536393 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
USP30-208ENST00000536393 EFCAB6Q5THR3 1501 aa8.59□□□□□ -1.03
USP30-208ENST00000536393 REREQ9P2R6 1566 aa8.58□□□□□ -1.04
USP30-208ENST00000536393 L1TD1Q5T7N2 865 aaKnown RBP8.58□□□□□ -1.04
USP30-208ENST00000536393 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
USP30-208ENST00000536393 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
USP30-208ENST00000536393 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
USP30-208ENST00000536393 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
USP30-208ENST00000536393 PNNQ9H307 717 aaKnown RBP8.57□□□□□ -1.04
USP30-208ENST00000536393 MED14O60244 1454 aa8.57□□□□□ -1.04
USP30-208ENST00000536393 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
USP30-208ENST00000536393 CLTCL1P53675 1640 aa8.56□□□□□ -1.04
USP30-208ENST00000536393 CRBNQ96SW2 442 aa8.56□□□□□ -1.04
USP30-208ENST00000536393 ADAMTS8Q9UP79 889 aa8.56□□□□□ -1.04
USP30-208ENST00000536393 ABCC11Q96J66 1382 aa8.56□□□□□ -1.04
USP30-208ENST00000536393 KIF16BQ96L93 1317 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 ADGRB3O60242 1522 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 CHD1O14646 1710 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 NBR1Q14596 966 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 C8orf34Q49A92 452 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 PLEKHH1Q9ULM0 1364 aa8.55□□□□□ -1.04
USP30-208ENST00000536393 PPRC1Q5VV67 1664 aaKnown RBP8.55□□□□□ -1.04
USP30-208ENST00000536393 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 ZNF518AQ6AHZ1 1483 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 CFAP53Q96M91 514 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 IL16Q14005 1332 aa8.54□□□□□ -1.04
USP30-208ENST00000536393 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
USP30-208ENST00000536393 IQSEC2Q5JU85 1478 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 NFKBIBQ15653 356 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 FAM43AQ8N2R8 423 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
USP30-208ENST00000536393 ABCA6Q8N139 1617 aa8.52□□□□□ -1.05
USP30-208ENST00000536393 PRKAR2AP13861 404 aaKnown RBP8.52□□□□□ -1.05
USP30-208ENST00000536393 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
USP30-208ENST00000536393 RUNDC1Q96C34 613 aa8.52□□□□□ -1.05
USP30-208ENST00000536393 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
USP30-208ENST00000536393 ARHGAP31Q2M1Z3 1444 aa8.52□□□□□ -1.05
USP30-208ENST00000536393 ZC3H13Q5T200 1668 aaKnown RBP8.52□□□□□ -1.05
USP30-208ENST00000536393 ADGRB2O60241 1585 aa8.52□□□□□ -1.05
USP30-208ENST00000536393 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
USP30-208ENST00000536393 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
USP30-208ENST00000536393 MROH1Q8NDA8 1641 aa8.51□□□□□ -1.05
USP30-208ENST00000536393 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
USP30-208ENST00000536393 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
USP30-208ENST00000536393 YEATS2Q9ULM3 1422 aa8.5□□□□□ -1.05
USP30-208ENST00000536393 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
USP30-208ENST00000536393 TRAPPC8Q9Y2L5 1435 aa8.5□□□□□ -1.05
USP30-208ENST00000536393 ANKRD36BQ8N2N9 1353 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 UGGT1Q9NYU2 1555 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 HECW2Q9P2P5 1572 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 PPLO60437 1756 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 HAX1O00165 279 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
USP30-208ENST00000536393 HAP1P54257 671 aaPredicted RBP8.48□□□□□ -1.05
USP30-208ENST00000536393 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
USP30-208ENST00000536393 WWC1Q8IX03 1113 aa8.48□□□□□ -1.05
USP30-208ENST00000536393 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
USP30-208ENST00000536393 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
USP30-208ENST00000536393 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
USP30-208ENST00000536393 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 SHPRHQ149N8 1683 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 DDX11L8A8MPP1 907 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
USP30-208ENST00000536393 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
USP30-208ENST00000536393 TBC1D32Q96NH3 1257 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 C14orf93Q9H972 538 aaKnown RBP8.47□□□□□ -1.05
USP30-208ENST00000536393 FRMPD1Q5SYB0 1578 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 CDC42BPGQ6DT37 1551 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 PIK3C2BO00750 1634 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 KIF24Q5T7B8 1368 aa8.47□□□□□ -1.05
USP30-208ENST00000536393 ANKRD26Q9UPS8 1709 aa8.46□□□□□ -1.05
USP30-208ENST00000536393 IPO8O15397 1037 aaKnown RBP8.46□□□□□ -1.06
USP30-208ENST00000536393 DDX19BQ9UMR2 479 aa8.46□□□□□ -1.06
USP30-208ENST00000536393 EVC2Q86UK5 1308 aa8.46□□□□□ -1.06
USP30-208ENST00000536393 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.06
USP30-208ENST00000536393 NEO1Q92859 1461 aa8.45□□□□□ -1.06
USP30-208ENST00000536393 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
USP30-208ENST00000536393 APAF1O14727 1248 aa8.45□□□□□ -1.06
USP30-208ENST00000536393 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
USP30-208ENST00000536393 RARSP54136 660 aaKnown RBP8.45□□□□□ -1.06
USP30-208ENST00000536393 SKOR2Q2VWA4 1001 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms