RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
PTPN21-202ENST00000536337 RLBP1P12271 317 aa16.17■□□□□ 0.18
PTPN21-202ENST00000536337 MVPQ14764 893 aaKnown RBP16.17■□□□□ 0.18
PTPN21-202ENST00000536337 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
PTPN21-202ENST00000536337 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
PTPN21-202ENST00000536337 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
PTPN21-202ENST00000536337 FOXD4L6Q3SYB3 417 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-202ENST00000536337 FOXD4L3Q6VB84 417 aaPredicted RBP16.16■□□□□ 0.18
PTPN21-202ENST00000536337 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
PTPN21-202ENST00000536337 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
PTPN21-202ENST00000536337 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
PTPN21-202ENST00000536337 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
PTPN21-202ENST00000536337 SCAF11Q99590 1463 aaKnown RBP16.15■□□□□ 0.18
PTPN21-202ENST00000536337 PLCB2Q00722 1185 aa16.14■□□□□ 0.18
PTPN21-202ENST00000536337 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.18
PTPN21-202ENST00000536337 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.18
PTPN21-202ENST00000536337 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
PTPN21-202ENST00000536337 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
PTPN21-202ENST00000536337 COG3Q96JB2 828 aa16.14■□□□□ 0.17
PTPN21-202ENST00000536337 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
PTPN21-202ENST00000536337 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
PTPN21-202ENST00000536337 CDK19Q9BWU1 502 aa16.13■□□□□ 0.17
PTPN21-202ENST00000536337 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
PTPN21-202ENST00000536337 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
PTPN21-202ENST00000536337 NOS1P29475 1434 aa16.12■□□□□ 0.17
PTPN21-202ENST00000536337 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
PTPN21-202ENST00000536337 IDI1Q13907 227 aa16.11■□□□□ 0.17
PTPN21-202ENST00000536337 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
PTPN21-202ENST00000536337 ARHGEF12Q9NZN5 1544 aa16.11■□□□□ 0.17
PTPN21-202ENST00000536337 BCORL1Q5H9F3 1711 aa16.11■□□□□ 0.17
PTPN21-202ENST00000536337 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
PTPN21-202ENST00000536337 OS9Q13438 667 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-202ENST00000536337 TRIM27P14373 513 aa16.1■□□□□ 0.17
PTPN21-202ENST00000536337 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
PTPN21-202ENST00000536337 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
PTPN21-202ENST00000536337 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-202ENST00000536337 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
PTPN21-202ENST00000536337 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
PTPN21-202ENST00000536337 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
PTPN21-202ENST00000536337 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
PTPN21-202ENST00000536337 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.17
PTPN21-202ENST00000536337 TRAK2O60296 914 aa16.08■□□□□ 0.16
PTPN21-202ENST00000536337 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
PTPN21-202ENST00000536337 KDM5CP41229 1560 aa16.08■□□□□ 0.16
PTPN21-202ENST00000536337 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
PTPN21-202ENST00000536337 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
PTPN21-202ENST00000536337 PLCH2O75038 1416 aa16.07■□□□□ 0.16
PTPN21-202ENST00000536337 AMPHP49418 695 aa16.07■□□□□ 0.16
PTPN21-202ENST00000536337 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
PTPN21-202ENST00000536337 C14orf93Q9H972 538 aaKnown RBP16.06■□□□□ 0.16
PTPN21-202ENST00000536337 RILPL2Q969X0 211 aa16.06■□□□□ 0.16
PTPN21-202ENST00000536337 NUP160Q12769 1436 aa16.06■□□□□ 0.16
PTPN21-202ENST00000536337 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
PTPN21-202ENST00000536337 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
PTPN21-202ENST00000536337 GNAI1P63096 354 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 ARID3AQ99856 593 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 TAOK2Q9UL54 1235 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 ADGRL1O94910 1474 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
PTPN21-202ENST00000536337 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
PTPN21-202ENST00000536337 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
PTPN21-202ENST00000536337 MAGI2Q86UL8 1455 aa16.04■□□□□ 0.16
PTPN21-202ENST00000536337 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
PTPN21-202ENST00000536337 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
PTPN21-202ENST00000536337 FANCAO15360 1455 aa16.03■□□□□ 0.16
PTPN21-202ENST00000536337 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
PTPN21-202ENST00000536337 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-202ENST00000536337 AAMPQ13685 434 aa16.03■□□□□ 0.16
PTPN21-202ENST00000536337 KCNJ4P48050 445 aa16.02■□□□□ 0.16
PTPN21-202ENST00000536337 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
PTPN21-202ENST00000536337 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.16
PTPN21-202ENST00000536337 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
PTPN21-202ENST00000536337 PLA2R1Q13018 1463 aa16.02■□□□□ 0.15
PTPN21-202ENST00000536337 MCM4P33991 863 aa16.01■□□□□ 0.15
PTPN21-202ENST00000536337 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
PTPN21-202ENST00000536337 MSNP26038 577 aaKnown RBP16■□□□□ 0.15
PTPN21-202ENST00000536337 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 DUOX2Q9NRD8 1548 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 FAM83GA6ND36 823 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 HMMRO75330 724 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 NME9Q86XW9 330 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 ZNF428Q96B54 188 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 FYB1O15117 783 aa16■□□□□ 0.15
PTPN21-202ENST00000536337 CFAP65Q6ZU64 1925 aaKnown RBP15.99■□□□□ 0.15
PTPN21-202ENST00000536337 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
PTPN21-202ENST00000536337 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
PTPN21-202ENST00000536337 TBC1D32Q96NH3 1257 aa15.98■□□□□ 0.15
PTPN21-202ENST00000536337 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
PTPN21-202ENST00000536337 ST18O60284 1047 aa15.98■□□□□ 0.15
PTPN21-202ENST00000536337 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
PTPN21-202ENST00000536337 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
PTPN21-202ENST00000536337 MCCP23508 829 aa15.98■□□□□ 0.15
PTPN21-202ENST00000536337 FCHSD2O94868 740 aa15.97■□□□□ 0.15
PTPN21-202ENST00000536337 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
PTPN21-202ENST00000536337 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms