RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 COL16A1Q07092 1604 aaPredicted RBP33.95■■■■□ 3.03
VPS37B-203ENST00000535765 C1orf167Q5SNV9 1468 aa33.95■■■■□ 3.02
VPS37B-203ENST00000535765 DLC1Q96QB1 1528 aa33.94■■■■□ 3.02
VPS37B-203ENST00000535765 CDC42BPGQ6DT37 1551 aa33.93■■■■□ 3.02
VPS37B-203ENST00000535765 SIN3AQ96ST3 1273 aa33.92■■■■□ 3.02
VPS37B-203ENST00000535765 PLEKHH1Q9ULM0 1364 aa33.92■■■■□ 3.02
VPS37B-203ENST00000535765 ORAI2Q96SN7 254 aa33.88■■■■□ 3.01
VPS37B-203ENST00000535765 DDX17Q92841 729 aaKnown RBP33.87■■■■□ 3.01
VPS37B-203ENST00000535765 L3MBTL2Q969R5 705 aa33.86■■■■□ 3.01
VPS37B-203ENST00000535765 SPATA31A6Q5VVP1 1343 aa33.84■■■■□ 3.01
VPS37B-203ENST00000535765 NHSL1Q5SYE7 1610 aa33.84■■■■□ 3.01
VPS37B-203ENST00000535765 NEUROD1Q13562 356 aa33.83■■■■□ 3.01
VPS37B-203ENST00000535765 LRRC59Q96AG4 307 aaKnown RBP33.83■■■■□ 3.01
VPS37B-203ENST00000535765 PRAM1Q96QH2 718 aa33.82■■■■□ 3
VPS37B-203ENST00000535765 NUTM2FA1L443 756 aa33.81■■■■□ 3
VPS37B-203ENST00000535765 ESCO1Q5FWF5 840 aa33.81■■■■□ 3
VPS37B-203ENST00000535765 POGKQ9P215 609 aa33.81■■■■□ 3
VPS37B-203ENST00000535765 SAFB2Q14151 953 aaKnown RBP eCLIP33.8■■■■□ 3
VPS37B-203ENST00000535765 FMN2Q9NZ56 1722 aa33.79■■■■□ 3
VPS37B-203ENST00000535765 TRAK1Q9UPV9 953 aa33.79■■■■□ 3
VPS37B-203ENST00000535765 RGS17Q9UGC6 210 aaPredicted RBP33.77■■■■□ 3
VPS37B-203ENST00000535765 ARHGEF28Q8N1W1 1705 aaKnown RBP33.76■■■■□ 3
VPS37B-203ENST00000535765 SOCS7O14512 581 aa33.76■■■□□ 2.99
VPS37B-203ENST00000535765 ADGRB2O60241 1585 aa33.74■■■□□ 2.99
VPS37B-203ENST00000535765 MEX3CQ5U5Q3 659 aaKnown RBP33.74■■■□□ 2.99
VPS37B-203ENST00000535765 SHPRHQ149N8 1683 aa33.74■■■□□ 2.99
VPS37B-203ENST00000535765 NUTM2BA6NNL0 878 aaPredicted RBP33.72■■■□□ 2.99
VPS37B-203ENST00000535765 NUTM2EB1AL46 878 aaPredicted RBP33.72■■■□□ 2.99
VPS37B-203ENST00000535765 NUTM2AQ8IVF1 878 aaPredicted RBP33.72■■■□□ 2.99
VPS37B-203ENST00000535765 SOS2Q07890 1332 aaPredicted RBP33.72■■■□□ 2.99
VPS37B-203ENST00000535765 LRP6O75581 1613 aa33.71■■■□□ 2.99
VPS37B-203ENST00000535765 NBPF1Q3BBV0 1214 aa33.7■■■□□ 2.99
VPS37B-203ENST00000535765 NPHP3Q7Z494 1330 aa33.7■■■□□ 2.99
VPS37B-203ENST00000535765 TRPM1Q7Z4N2 1603 aa33.69■■■□□ 2.98
VPS37B-203ENST00000535765 PCGF6Q9BYE7 350 aa33.69■■■□□ 2.98
VPS37B-203ENST00000535765 FOXO3O43524 673 aa33.68■■■□□ 2.98
VPS37B-203ENST00000535765 PNPLA6Q8IY17 1366 aa33.68■■■□□ 2.98
VPS37B-203ENST00000535765 RGPD8O14715 1765 aaPredicted RBP33.67■■■□□ 2.98
VPS37B-203ENST00000535765 MINK1Q8N4C8 1332 aaPredicted RBP33.64■■■□□ 2.98
VPS37B-203ENST00000535765 KIF1AQ12756 1690 aa33.64■■■□□ 2.98
VPS37B-203ENST00000535765 TONSLQ96HA7 1378 aa33.63■■■□□ 2.97
VPS37B-203ENST00000535765 HIRIP3Q9BW71 556 aaPredicted RBP33.63■■■□□ 2.97
VPS37B-203ENST00000535765 XPCQ01831 940 aaPredicted RBP33.62■■■□□ 2.97
VPS37B-203ENST00000535765 POTEAQ6S8J7 498 aa33.62■■■□□ 2.97
VPS37B-203ENST00000535765 ANKARQ7Z5J8 1434 aa33.62■■■□□ 2.97
VPS37B-203ENST00000535765 EIF3AQ14152 1382 aaKnown RBP33.6■■■□□ 2.97
VPS37B-203ENST00000535765 CLSPNQ9HAW4 1339 aa33.58■■■□□ 2.97
VPS37B-203ENST00000535765 PHF8Q9UPP1 1060 aa33.58■■■□□ 2.97
VPS37B-203ENST00000535765 USP32Q8NFA0 1604 aa33.57■■■□□ 2.97
VPS37B-203ENST00000535765 WASLO00401 505 aaPredicted RBP33.57■■■□□ 2.96
VPS37B-203ENST00000535765 PXDNQ92626 1479 aa33.56■■■□□ 2.96
VPS37B-203ENST00000535765 ZNF772Q68DY9 489 aaPredicted RBP33.55■■■□□ 2.96
VPS37B-203ENST00000535765 NBPF8Q3BBV2 869 aa33.54■■■□□ 2.96
VPS37B-203ENST00000535765 TULP4Q9NRJ4 1543 aa33.53■■■□□ 2.96
VPS37B-203ENST00000535765 ROCK2O75116 1388 aaKnown RBP33.52■■■□□ 2.96
VPS37B-203ENST00000535765 GPRASP1Q5JY77 1395 aa33.52■■■□□ 2.96
VPS37B-203ENST00000535765 KRT28Q7Z3Y7 464 aa33.52■■■□□ 2.96
VPS37B-203ENST00000535765 ADAMTS2O95450 1211 aa33.51■■■□□ 2.95
VPS37B-203ENST00000535765 C8orf37Q96NL8 207 aa33.51■■■□□ 2.95
VPS37B-203ENST00000535765 CENPJQ9HC77 1338 aaPredicted RBP33.5■■■□□ 2.95
VPS37B-203ENST00000535765 PMFBP1Q8TBY8 1022 aa33.48■■■□□ 2.95
VPS37B-203ENST00000535765 AFF2P51816 1311 aa33.48■■■□□ 2.95
VPS37B-203ENST00000535765 ITSN1Q15811 1721 aa33.48■■■□□ 2.95
VPS37B-203ENST00000535765 PSME1Q06323 249 aa33.47■■■□□ 2.95
VPS37B-203ENST00000535765 QRICH2Q9H0J4 1663 aa33.47■■■□□ 2.95
VPS37B-203ENST00000535765 SPATA31A3Q5VYP0 1347 aa33.46■■■□□ 2.95
VPS37B-203ENST00000535765 PRR36Q9H6K5 1346 aa33.46■■■□□ 2.95
VPS37B-203ENST00000535765 COL22A1Q8NFW1 1626 aaPredicted RBP33.46■■■□□ 2.95
VPS37B-203ENST00000535765 TIMELESSQ9UNS1 1208 aa33.45■■■□□ 2.95
VPS37B-203ENST00000535765 RALGAPBQ86X10 1494 aa33.44■■■□□ 2.94
VPS37B-203ENST00000535765 NGLY1Q96IV0 654 aa33.44■■■□□ 2.94
VPS37B-203ENST00000535765 CDK19Q9BWU1 502 aa33.43■■■□□ 2.94
VPS37B-203ENST00000535765 ATP7BP35670 1465 aa33.41■■■□□ 2.94
VPS37B-203ENST00000535765 NUDT16Q96DE0 195 aaKnown RBP33.4■■■□□ 2.94
VPS37B-203ENST00000535765 LMOD2Q6P5Q4 547 aa33.37■■■□□ 2.93
VPS37B-203ENST00000535765 TNS3Q68CZ2 1445 aa33.36■■■□□ 2.93
VPS37B-203ENST00000535765 SBNO1A3KN83 1393 aa33.36■■■□□ 2.93
VPS37B-203ENST00000535765 TOPAZ1Q8N9V7 1692 aa33.36■■■□□ 2.93
VPS37B-203ENST00000535765 NGDNQ8NEJ9 315 aaKnown RBP33.36■■■□□ 2.93
VPS37B-203ENST00000535765 CARD11Q9BXL7 1154 aa33.36■■■□□ 2.93
VPS37B-203ENST00000535765 CCDC61Q9Y6R9 512 aa33.35■■■□□ 2.93
VPS37B-203ENST00000535765 RXRBP28702 533 aa33.34■■■□□ 2.93
VPS37B-203ENST00000535765 QTRT2Q9H974 415 aaKnown RBP33.32■■■□□ 2.92
VPS37B-203ENST00000535765 TRPM3Q9HCF6 1732 aaPredicted RBP33.31■■■□□ 2.92
VPS37B-203ENST00000535765 HAP1P54257 671 aaPredicted RBP33.31■■■□□ 2.92
VPS37B-203ENST00000535765 ARHGEF10O15013 1369 aa33.31■■■□□ 2.92
VPS37B-203ENST00000535765 SBNO2Q9Y2G9 1366 aa33.31■■■□□ 2.92
VPS37B-203ENST00000535765 PLEKHG5O94827 1062 aa33.3■■■□□ 2.92
VPS37B-203ENST00000535765 USP21Q9UK80 565 aa33.3■■■□□ 2.92
VPS37B-203ENST00000535765 PLEKHG3A1L390 1219 aa33.29■■■□□ 2.92
VPS37B-203ENST00000535765 SRPK2P78362 688 aaKnown RBP33.29■■■□□ 2.92
VPS37B-203ENST00000535765 FNBP4Q8N3X1 1017 aaPredicted RBP33.29■■■□□ 2.92
VPS37B-203ENST00000535765 EVC2Q86UK5 1308 aa33.28■■■□□ 2.92
VPS37B-203ENST00000535765 CCER1Q8TC90 406 aaPredicted RBP33.27■■■□□ 2.92
VPS37B-203ENST00000535765 MARF1Q9Y4F3 1742 aaKnown RBP33.27■■■□□ 2.92
VPS37B-203ENST00000535765 POLR3AO14802 1390 aaPredicted RBP33.26■■■□□ 2.92
VPS37B-203ENST00000535765 CABLES1Q8TDN4 633 aa33.26■■■□□ 2.91
VPS37B-203ENST00000535765 ALS2Q96Q42 1657 aa33.24■■■□□ 2.91
VPS37B-203ENST00000535765 PAK3O75914 559 aaPredicted RBP33.24■■■□□ 2.91
VPS37B-203ENST00000535765 RBM6P78332 1123 aaKnown RBP33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms