RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
MCF2L-232ENST00000535094 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
MCF2L-232ENST00000535094 DDX11L8A8MPP1 907 aa19.91■□□□□ 0.78
MCF2L-232ENST00000535094 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
MCF2L-232ENST00000535094 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
MCF2L-232ENST00000535094 IPO8O15397 1037 aaKnown RBP19.91■□□□□ 0.78
MCF2L-232ENST00000535094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.91■□□□□ 0.785e-6■■■■□ 20.3
MCF2L-232ENST00000535094 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
MCF2L-232ENST00000535094 TMEM57Q8N5G2 664 aa19.9■□□□□ 0.78
MCF2L-232ENST00000535094 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.78
MCF2L-232ENST00000535094 MRE11P49959 708 aa19.89■□□□□ 0.78
MCF2L-232ENST00000535094 TRMT2AQ8IZ69 625 aaKnown RBP19.89■□□□□ 0.78
MCF2L-232ENST00000535094 GRPEL1Q9HAV7 217 aa19.89■□□□□ 0.78
MCF2L-232ENST00000535094 DDX49Q9Y6V7 483 aaKnown RBP19.89■□□□□ 0.78
MCF2L-232ENST00000535094 TRIM27P14373 513 aa19.89■□□□□ 0.77
MCF2L-232ENST00000535094 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
MCF2L-232ENST00000535094 UBE2Q2Q8WVN8 375 aa19.88■□□□□ 0.77
MCF2L-232ENST00000535094 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
MCF2L-232ENST00000535094 WDR63Q8IWG1 891 aa19.88■□□□□ 0.77
MCF2L-232ENST00000535094 SHANK2Q9UPX8 1470 aa19.87■□□□□ 0.77
MCF2L-232ENST00000535094 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
MCF2L-232ENST00000535094 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
MCF2L-232ENST00000535094 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
MCF2L-232ENST00000535094 HMOX1P09601 288 aa19.86■□□□□ 0.77
MCF2L-232ENST00000535094 ATF7IPQ6VMQ6 1270 aa19.86■□□□□ 0.77
MCF2L-232ENST00000535094 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
MCF2L-232ENST00000535094 FOXD4L6Q3SYB3 417 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-232ENST00000535094 FOXD4L3Q6VB84 417 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-232ENST00000535094 NOL8Q76FK4 1167 aaKnown RBP19.85■□□□□ 0.77
MCF2L-232ENST00000535094 FBLN1P23142 703 aa19.84■□□□□ 0.77
MCF2L-232ENST00000535094 ABCC10Q5T3U5 1492 aa19.84■□□□□ 0.77
MCF2L-232ENST00000535094 MSNP26038 577 aaKnown RBP19.84■□□□□ 0.77
MCF2L-232ENST00000535094 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
MCF2L-232ENST00000535094 SOX12O15370 315 aa19.84■□□□□ 0.77
MCF2L-232ENST00000535094 ESPNB1AK53 854 aa19.83■□□□□ 0.77
MCF2L-232ENST00000535094 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.76
MCF2L-232ENST00000535094 TNPO1Q92973 898 aaKnown RBP19.82■□□□□ 0.76
MCF2L-232ENST00000535094 ANTXR1Q9H6X2 564 aa19.82■□□□□ 0.76
MCF2L-232ENST00000535094 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
MCF2L-232ENST00000535094 TMPOP42166 694 aaKnown RBP19.81■□□□□ 0.76
MCF2L-232ENST00000535094 EVC2Q86UK5 1308 aa19.8■□□□□ 0.76
MCF2L-232ENST00000535094 NINLQ9Y2I6 1382 aa19.8■□□□□ 0.76
MCF2L-232ENST00000535094 MCTP1Q6DN14 999 aa19.79■□□□□ 0.76
MCF2L-232ENST00000535094 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
MCF2L-232ENST00000535094 CALD1Q05682 793 aaKnown RBP19.78■□□□□ 0.76
MCF2L-232ENST00000535094 INSRP06213 1382 aa19.78■□□□□ 0.76
MCF2L-232ENST00000535094 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
MCF2L-232ENST00000535094 PTMAP06454 111 aaKnown RBP19.78■□□□□ 0.76
MCF2L-232ENST00000535094 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
MCF2L-232ENST00000535094 DIAPH1O60610 1272 aaKnown RBP19.78■□□□□ 0.76
MCF2L-232ENST00000535094 AAMPQ13685 434 aa19.78■□□□□ 0.76
MCF2L-232ENST00000535094 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
MCF2L-232ENST00000535094 STAC3Q96MF2 364 aa19.77■□□□□ 0.76
MCF2L-232ENST00000535094 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
MCF2L-232ENST00000535094 NUP160Q12769 1436 aa19.77■□□□□ 0.76
MCF2L-232ENST00000535094 SSFA2P28290 1259 aa19.77■□□□□ 0.75
MCF2L-232ENST00000535094 NASPP49321 788 aaPredicted RBP19.76■□□□□ 0.75
MCF2L-232ENST00000535094 CDC42BPAQ5VT25 1732 aa19.75■□□□□ 0.75
MCF2L-232ENST00000535094 CAVIN1Q6NZI2 390 aaKnown RBP19.75■□□□□ 0.75
MCF2L-232ENST00000535094 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
MCF2L-232ENST00000535094 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
MCF2L-232ENST00000535094 RBM10P98175 930 aaKnown RBP19.74■□□□□ 0.75
MCF2L-232ENST00000535094 PLCB2Q00722 1185 aa19.74■□□□□ 0.75
MCF2L-232ENST00000535094 DNTTIP2Q5QJE6 756 aaKnown RBP19.74■□□□□ 0.75
MCF2L-232ENST00000535094 MPNDQ8N594 471 aa19.73■□□□□ 0.75
MCF2L-232ENST00000535094 TERF2IPQ9NYB0 399 aa19.73■□□□□ 0.75
MCF2L-232ENST00000535094 KIF16BQ96L93 1317 aa19.73■□□□□ 0.75
MCF2L-232ENST00000535094 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-232ENST00000535094 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-232ENST00000535094 FAM13BQ9NYF5 915 aa19.71■□□□□ 0.75
MCF2L-232ENST00000535094 SAMD9LQ8IVG5 1584 aa19.71■□□□□ 0.75
MCF2L-232ENST00000535094 CLCN1P35523 988 aa19.71■□□□□ 0.75
MCF2L-232ENST00000535094 SKOR2Q2VWA4 1001 aaPredicted RBP19.7■□□□□ 0.74
MCF2L-232ENST00000535094 RNF214Q8ND24 703 aa19.7■□□□□ 0.74
MCF2L-232ENST00000535094 PLEKHG5O94827 1062 aa19.7■□□□□ 0.74
MCF2L-232ENST00000535094 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
MCF2L-232ENST00000535094 EIF2AK4Q9P2K8 1649 aaKnown RBP19.7■□□□□ 0.74
MCF2L-232ENST00000535094 NOS1P29475 1434 aa19.7■□□□□ 0.74
MCF2L-232ENST00000535094 K7ELQ4 463 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-232ENST00000535094 CASC1Q6TDU7 716 aa19.69■□□□□ 0.74
MCF2L-232ENST00000535094 GAS2L3Q86XJ1 694 aa19.69■□□□□ 0.74
MCF2L-232ENST00000535094 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
MCF2L-232ENST00000535094 R3HCC1Q9Y3T6 440 aaKnown RBP19.68■□□□□ 0.74
MCF2L-232ENST00000535094 TBC1D9Q6ZT07 1266 aa19.68■□□□□ 0.74
MCF2L-232ENST00000535094 KIAA1211Q6ZU35 1233 aa19.67■□□□□ 0.74
MCF2L-232ENST00000535094 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
MCF2L-232ENST00000535094 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
MCF2L-232ENST00000535094 MLECQ14165 292 aa19.67■□□□□ 0.74
MCF2L-232ENST00000535094 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
MCF2L-232ENST00000535094 PKNOX2Q96KN3 472 aa19.66■□□□□ 0.74
MCF2L-232ENST00000535094 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
MCF2L-232ENST00000535094 E9PCH4 1651 aa19.66■□□□□ 0.74
MCF2L-232ENST00000535094 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
MCF2L-232ENST00000535094 HDAC1Q13547 482 aaPredicted RBP19.66■□□□□ 0.74
MCF2L-232ENST00000535094 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
MCF2L-232ENST00000535094 DCTN1Q14203 1278 aa19.65■□□□□ 0.74
MCF2L-232ENST00000535094 GAS2L2Q8NHY3 880 aa19.65■□□□□ 0.74
MCF2L-232ENST00000535094 CD2BP2O95400 341 aaKnown RBP19.65■□□□□ 0.74
MCF2L-232ENST00000535094 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
MCF2L-232ENST00000535094 NPC1L1Q9UHC9 1359 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms