RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CFAP44Q96MT7 982 aa15.08■□□□□ 0
BDNF-218ENST00000533246 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
BDNF-218ENST00000533246 ST18O60284 1047 aa15.08■□□□□ 0
BDNF-218ENST00000533246 ERBINQ96RT1 1412 aa15.07■□□□□ 0
BDNF-218ENST00000533246 GNAI1P63096 354 aa15.07■□□□□ 0
BDNF-218ENST00000533246 API5Q9BZZ5 524 aaKnown RBP15.07■□□□□ 0
BDNF-218ENST00000533246 CDK19Q9BWU1 502 aa15.06■□□□□ 0
BDNF-218ENST00000533246 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
BDNF-218ENST00000533246 PSME1Q06323 249 aa15.06■□□□□ 0
BDNF-218ENST00000533246 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
BDNF-218ENST00000533246 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
BDNF-218ENST00000533246 ADGRF5Q8IZF2 1346 aa15.05■□□□□ 0
BDNF-218ENST00000533246 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
BDNF-218ENST00000533246 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
BDNF-218ENST00000533246 KIF16BQ96L93 1317 aa15.05■□□□□ -0
BDNF-218ENST00000533246 URB2Q14146 1524 aaKnown RBP15.05■□□□□ -0
BDNF-218ENST00000533246 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
BDNF-218ENST00000533246 WWC1Q8IX03 1113 aa15.04■□□□□ -0
BDNF-218ENST00000533246 ROCK1Q13464 1354 aa15.04■□□□□ -0
BDNF-218ENST00000533246 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
BDNF-218ENST00000533246 FBLN1P23142 703 aa15.03■□□□□ -0
BDNF-218ENST00000533246 AIMP1Q12904 312 aaKnown RBP15.03■□□□□ -0
BDNF-218ENST00000533246 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
BDNF-218ENST00000533246 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.02■□□□□ -0
BDNF-218ENST00000533246 SUPT6HQ7KZ85 1726 aaKnown RBP15.02■□□□□ -0
BDNF-218ENST00000533246 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
BDNF-218ENST00000533246 SLFN5Q08AF3 891 aa15.02□□□□□ -0.01
BDNF-218ENST00000533246 PDE3AQ14432 1141 aa15.02□□□□□ -0.01
BDNF-218ENST00000533246 PRDM10Q9NQV6 1147 aa15.02□□□□□ -0.01
BDNF-218ENST00000533246 PTMSP20962 102 aa15.01□□□□□ -0.01
BDNF-218ENST00000533246 TWISTNBQ3B726 338 aaPredicted RBP15.01□□□□□ -0.01
BDNF-218ENST00000533246 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
BDNF-218ENST00000533246 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
BDNF-218ENST00000533246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
BDNF-218ENST00000533246 CHMP5Q9NZZ3 219 aa15□□□□□ -0.01
BDNF-218ENST00000533246 HECW1Q76N89 1606 aa15□□□□□ -0.01
BDNF-218ENST00000533246 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
BDNF-218ENST00000533246 DCTN1Q14203 1278 aa15□□□□□ -0.01
BDNF-218ENST00000533246 AEBP1Q8IUX7 1158 aa15□□□□□ -0.01
BDNF-218ENST00000533246 MAGI1Q96QZ7 1491 aaPredicted RBP15□□□□□ -0.01
BDNF-218ENST00000533246 GPATCH3Q96I76 525 aa15□□□□□ -0.01
BDNF-218ENST00000533246 PDCL3Q9H2J4 239 aa15□□□□□ -0.01
BDNF-218ENST00000533246 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
BDNF-218ENST00000533246 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
BDNF-218ENST00000533246 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
BDNF-218ENST00000533246 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
BDNF-218ENST00000533246 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
BDNF-218ENST00000533246 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
BDNF-218ENST00000533246 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
BDNF-218ENST00000533246 ABTB2Q8N961 1025 aa14.98□□□□□ -0.01
BDNF-218ENST00000533246 MIS18AQ9NYP9 233 aa14.98□□□□□ -0.01
BDNF-218ENST00000533246 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
BDNF-218ENST00000533246 ATF7IPQ6VMQ6 1270 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 DIAPH3Q9NSV4 1193 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 RPRD2Q5VT52 1461 aaKnown RBP14.97□□□□□ -0.01
BDNF-218ENST00000533246 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 REC8O95072 547 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
BDNF-218ENST00000533246 IDI1Q13907 227 aa14.96□□□□□ -0.01
BDNF-218ENST00000533246 PLEKHH2Q8IVE3 1493 aa14.96□□□□□ -0.01
BDNF-218ENST00000533246 RBM33Q96EV2 1170 aaKnown RBP14.96□□□□□ -0.01
BDNF-218ENST00000533246 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
BDNF-218ENST00000533246 NLRP2Q9NX02 1062 aa14.96□□□□□ -0.01
BDNF-218ENST00000533246 NSD3Q9BZ95 1437 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 SLC52A1Q9NWF4 448 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 DISP3Q9P2K9 1392 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 TPM2P07951 284 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
BDNF-218ENST00000533246 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
BDNF-218ENST00000533246 MAP3K1Q13233 1512 aa14.94□□□□□ -0.02
BDNF-218ENST00000533246 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
BDNF-218ENST00000533246 SYAP1Q96A49 352 aaPredicted RBP14.94□□□□□ -0.02
BDNF-218ENST00000533246 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
BDNF-218ENST00000533246 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
BDNF-218ENST00000533246 TMEM57Q8N5G2 664 aa14.94□□□□□ -0.02
BDNF-218ENST00000533246 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
BDNF-218ENST00000533246 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
BDNF-218ENST00000533246 MCTP1Q6DN14 999 aa14.94□□□□□ -0.02
BDNF-218ENST00000533246 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
BDNF-218ENST00000533246 ZNF771Q7L3S4 317 aaPredicted RBP14.93□□□□□ -0.02
BDNF-218ENST00000533246 SYTL4Q96C24 671 aaPredicted RBP14.93□□□□□ -0.02
BDNF-218ENST00000533246 MAP7D2Q96T17 732 aa14.93□□□□□ -0.02
BDNF-218ENST00000533246 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
BDNF-218ENST00000533246 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
BDNF-218ENST00000533246 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
BDNF-218ENST00000533246 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
BDNF-218ENST00000533246 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
BDNF-218ENST00000533246 CCDC141Q6ZP82 1450 aa14.92□□□□□ -0.02
BDNF-218ENST00000533246 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
BDNF-218ENST00000533246 UBTFL1P0CB47 393 aaPredicted RBP14.92□□□□□ -0.02
BDNF-218ENST00000533246 RARSP54136 660 aaKnown RBP14.92□□□□□ -0.02
BDNF-218ENST00000533246 CHAF1AQ13111 956 aaPredicted RBP14.92□□□□□ -0.02
BDNF-218ENST00000533246 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
BDNF-218ENST00000533246 EMILIN1Q9Y6C2 1016 aa14.91□□□□□ -0.02
BDNF-218ENST00000533246 GTF2E1P29083 439 aaPredicted RBP14.9□□□□□ -0.02
BDNF-218ENST00000533246 NEK4P51957 841 aa14.9□□□□□ -0.02
BDNF-218ENST00000533246 FOSBP53539 338 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms