RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
PKP3-209ENST00000533069 NHSL1Q5SYE7 1610 aa24.21■■□□□ 1.47
PKP3-209ENST00000533069 ADGRB1O14514 1584 aa24.21■■□□□ 1.47
PKP3-209ENST00000533069 PLEKHH1Q9ULM0 1364 aa24.21■■□□□ 1.47
PKP3-209ENST00000533069 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
PKP3-209ENST00000533069 DLC1Q96QB1 1528 aa24.2■■□□□ 1.46
PKP3-209ENST00000533069 SHPRHQ149N8 1683 aa24.17■■□□□ 1.46
PKP3-209ENST00000533069 LRRC59Q96AG4 307 aaKnown RBP24.16■■□□□ 1.46
PKP3-209ENST00000533069 ORAI2Q96SN7 254 aa24.16■■□□□ 1.46
PKP3-209ENST00000533069 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
PKP3-209ENST00000533069 POGKQ9P215 609 aa24.12■■□□□ 1.45
PKP3-209ENST00000533069 ESCO1Q5FWF5 840 aa24.11■■□□□ 1.45
PKP3-209ENST00000533069 DDX17Q92841 729 aaKnown RBP24.11■■□□□ 1.45
PKP3-209ENST00000533069 SOS2Q07890 1332 aaPredicted RBP24.1■■□□□ 1.45
PKP3-209ENST00000533069 SOCS7O14512 581 aa24.1■■□□□ 1.45
PKP3-209ENST00000533069 FMN2Q9NZ56 1722 aa24.1■■□□□ 1.45
PKP3-209ENST00000533069 LRP6O75581 1613 aa24.1■■□□□ 1.45
PKP3-209ENST00000533069 NPHP3Q7Z494 1330 aa24.1■■□□□ 1.45
PKP3-209ENST00000533069 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
PKP3-209ENST00000533069 TRAK1Q9UPV9 953 aa24.09■■□□□ 1.45
PKP3-209ENST00000533069 PNPLA6Q8IY17 1366 aa24.07■■□□□ 1.44
PKP3-209ENST00000533069 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
PKP3-209ENST00000533069 ADGRB2O60241 1585 aa24.07■■□□□ 1.44
PKP3-209ENST00000533069 NUTM2FA1L443 756 aa24.06■■□□□ 1.44
PKP3-209ENST00000533069 MEX3CQ5U5Q3 659 aaKnown RBP24.06■■□□□ 1.44
PKP3-209ENST00000533069 KIAA1210Q9ULL0 1709 aa24.05■■□□□ 1.44
PKP3-209ENST00000533069 ANKARQ7Z5J8 1434 aa24.03■■□□□ 1.44
PKP3-209ENST00000533069 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
PKP3-209ENST00000533069 KIF1AQ12756 1690 aa24.02■■□□□ 1.44
PKP3-209ENST00000533069 PXDNQ92626 1479 aa24.02■■□□□ 1.44
PKP3-209ENST00000533069 NUTM2BA6NNL0 878 aaPredicted RBP24.01■■□□□ 1.43
PKP3-209ENST00000533069 NUTM2EB1AL46 878 aaPredicted RBP24.01■■□□□ 1.43
PKP3-209ENST00000533069 FOXO3O43524 673 aa24.01■■□□□ 1.43
PKP3-209ENST00000533069 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
PKP3-209ENST00000533069 L3MBTL2Q969R5 705 aa24.01■■□□□ 1.43
PKP3-209ENST00000533069 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
PKP3-209ENST00000533069 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
PKP3-209ENST00000533069 PHF8Q9UPP1 1060 aa23.98■■□□□ 1.43
PKP3-209ENST00000533069 MINK1Q8N4C8 1332 aaPredicted RBP23.98■■□□□ 1.43
PKP3-209ENST00000533069 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
PKP3-209ENST00000533069 ZNF772Q68DY9 489 aaPredicted RBP23.97■■□□□ 1.43
PKP3-209ENST00000533069 POTEAQ6S8J7 498 aa23.97■■□□□ 1.43
PKP3-209ENST00000533069 ARHGEF28Q8N1W1 1705 aaKnown RBP23.97■■□□□ 1.43
PKP3-209ENST00000533069 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
PKP3-209ENST00000533069 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.43
PKP3-209ENST00000533069 TULP4Q9NRJ4 1543 aa23.95■■□□□ 1.43
PKP3-209ENST00000533069 WASLO00401 505 aaPredicted RBP23.95■■□□□ 1.42
PKP3-209ENST00000533069 XPCQ01831 940 aaPredicted RBP23.94■■□□□ 1.42
PKP3-209ENST00000533069 NBPF1Q3BBV0 1214 aa23.94■■□□□ 1.42
PKP3-209ENST00000533069 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
PKP3-209ENST00000533069 PSME1Q06323 249 aa23.91■■□□□ 1.42
PKP3-209ENST00000533069 KRT28Q7Z3Y7 464 aa23.91■■□□□ 1.42
PKP3-209ENST00000533069 SPATA31A3Q5VYP0 1347 aa23.9■■□□□ 1.42
PKP3-209ENST00000533069 C8orf37Q96NL8 207 aa23.89■■□□□ 1.41
PKP3-209ENST00000533069 AFF2P51816 1311 aa23.88■■□□□ 1.41
PKP3-209ENST00000533069 PRR36Q9H6K5 1346 aa23.88■■□□□ 1.41
PKP3-209ENST00000533069 TNS3Q68CZ2 1445 aa23.88■■□□□ 1.41
PKP3-209ENST00000533069 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
PKP3-209ENST00000533069 ADAMTS2O95450 1211 aa23.87■■□□□ 1.41
PKP3-209ENST00000533069 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
PKP3-209ENST00000533069 TRPM1Q7Z4N2 1603 aa23.86■■□□□ 1.41
PKP3-209ENST00000533069 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
PKP3-209ENST00000533069 ATP7BP35670 1465 aa23.86■■□□□ 1.41
PKP3-209ENST00000533069 RGPD8O14715 1765 aaPredicted RBP23.86■■□□□ 1.41
PKP3-209ENST00000533069 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
PKP3-209ENST00000533069 ARHGEF10O15013 1369 aa23.84■■□□□ 1.41
PKP3-209ENST00000533069 ROCK2O75116 1388 aaKnown RBP23.84■■□□□ 1.41
PKP3-209ENST00000533069 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
PKP3-209ENST00000533069 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
PKP3-209ENST00000533069 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.41
PKP3-209ENST00000533069 CDK19Q9BWU1 502 aa23.83■■□□□ 1.41
PKP3-209ENST00000533069 NGDNQ8NEJ9 315 aaKnown RBP23.8■■□□□ 1.4
PKP3-209ENST00000533069 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
PKP3-209ENST00000533069 RXRBP28702 533 aa23.79■■□□□ 1.4
PKP3-209ENST00000533069 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
PKP3-209ENST00000533069 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
PKP3-209ENST00000533069 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
PKP3-209ENST00000533069 NBPF8Q3BBV2 869 aa23.77■■□□□ 1.4
PKP3-209ENST00000533069 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
PKP3-209ENST00000533069 QTRT2Q9H974 415 aaKnown RBP23.76■■□□□ 1.39
PKP3-209ENST00000533069 USP21Q9UK80 565 aa23.76■■□□□ 1.39
PKP3-209ENST00000533069 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
PKP3-209ENST00000533069 TOPAZ1Q8N9V7 1692 aa23.75■■□□□ 1.39
PKP3-209ENST00000533069 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
PKP3-209ENST00000533069 HAP1P54257 671 aaPredicted RBP23.74■■□□□ 1.39
PKP3-209ENST00000533069 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
PKP3-209ENST00000533069 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
PKP3-209ENST00000533069 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
PKP3-209ENST00000533069 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
PKP3-209ENST00000533069 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
PKP3-209ENST00000533069 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
PKP3-209ENST00000533069 MARF1Q9Y4F3 1742 aaKnown RBP23.71■■□□□ 1.39
PKP3-209ENST00000533069 EVC2Q86UK5 1308 aa23.71■■□□□ 1.39
PKP3-209ENST00000533069 ALS2Q96Q42 1657 aa23.7■■□□□ 1.39
PKP3-209ENST00000533069 ACEP12821 1306 aa23.7■■□□□ 1.38
PKP3-209ENST00000533069 BCL9LQ86UU0 1499 aa23.69■■□□□ 1.38
PKP3-209ENST00000533069 ATRNO75882 1429 aa23.69■■□□□ 1.38
PKP3-209ENST00000533069 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
PKP3-209ENST00000533069 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
PKP3-209ENST00000533069 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms