RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
USH1C-203ENST00000526181 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
USH1C-203ENST00000526181 RGS17Q9UGC6 210 aaPredicted RBP19.64■□□□□ 0.73
USH1C-203ENST00000526181 ADGRB1O14514 1584 aa19.64■□□□□ 0.73
USH1C-203ENST00000526181 LRP6O75581 1613 aa19.64■□□□□ 0.73
USH1C-203ENST00000526181 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
USH1C-203ENST00000526181 NUTM2FA1L443 756 aa19.6■□□□□ 0.73
USH1C-203ENST00000526181 SOCS7O14512 581 aa19.6■□□□□ 0.73
USH1C-203ENST00000526181 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
USH1C-203ENST00000526181 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
USH1C-203ENST00000526181 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
USH1C-203ENST00000526181 DLC1Q96QB1 1528 aa19.58■□□□□ 0.73
USH1C-203ENST00000526181 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.72
USH1C-203ENST00000526181 FMN2Q9NZ56 1722 aa19.57■□□□□ 0.72
USH1C-203ENST00000526181 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
USH1C-203ENST00000526181 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
USH1C-203ENST00000526181 PNPLA6Q8IY17 1366 aa19.56■□□□□ 0.72
USH1C-203ENST00000526181 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
USH1C-203ENST00000526181 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
USH1C-203ENST00000526181 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
USH1C-203ENST00000526181 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
USH1C-203ENST00000526181 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
USH1C-203ENST00000526181 POTEAQ6S8J7 498 aa19.54■□□□□ 0.72
USH1C-203ENST00000526181 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
USH1C-203ENST00000526181 POGKQ9P215 609 aa19.53■□□□□ 0.72
USH1C-203ENST00000526181 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
USH1C-203ENST00000526181 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
USH1C-203ENST00000526181 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
USH1C-203ENST00000526181 PXDNQ92626 1479 aa19.51■□□□□ 0.71
USH1C-203ENST00000526181 ADGRB2O60241 1585 aa19.5■□□□□ 0.71
USH1C-203ENST00000526181 FOXO3O43524 673 aa19.5■□□□□ 0.71
USH1C-203ENST00000526181 HIRIP3Q9BW71 556 aaPredicted RBP19.49■□□□□ 0.71
USH1C-203ENST00000526181 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
USH1C-203ENST00000526181 MINK1Q8N4C8 1332 aaPredicted RBP19.48■□□□□ 0.71
USH1C-203ENST00000526181 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
USH1C-203ENST00000526181 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
USH1C-203ENST00000526181 KIF1AQ12756 1690 aa19.47■□□□□ 0.71
USH1C-203ENST00000526181 KIAA1210Q9ULL0 1709 aa19.46■□□□□ 0.71
USH1C-203ENST00000526181 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
USH1C-203ENST00000526181 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
USH1C-203ENST00000526181 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
USH1C-203ENST00000526181 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
USH1C-203ENST00000526181 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
USH1C-203ENST00000526181 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
USH1C-203ENST00000526181 PHF8Q9UPP1 1060 aa19.43■□□□□ 0.7
USH1C-203ENST00000526181 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
USH1C-203ENST00000526181 ADAMTS2O95450 1211 aa19.42■□□□□ 0.7
USH1C-203ENST00000526181 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
USH1C-203ENST00000526181 TULP4Q9NRJ4 1543 aa19.41■□□□□ 0.7
USH1C-203ENST00000526181 AFF2P51816 1311 aa19.41■□□□□ 0.7
USH1C-203ENST00000526181 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
USH1C-203ENST00000526181 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
USH1C-203ENST00000526181 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.69
USH1C-203ENST00000526181 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
USH1C-203ENST00000526181 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
USH1C-203ENST00000526181 SPATA31A3Q5VYP0 1347 aa19.38■□□□□ 0.69
USH1C-203ENST00000526181 TRPM1Q7Z4N2 1603 aa19.36■□□□□ 0.69
USH1C-203ENST00000526181 EIF3AQ14152 1382 aaKnown RBP19.36■□□□□ 0.69
USH1C-203ENST00000526181 ATP7BP35670 1465 aa19.35■□□□□ 0.69
USH1C-203ENST00000526181 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
USH1C-203ENST00000526181 NGLY1Q96IV0 654 aa19.34■□□□□ 0.69
USH1C-203ENST00000526181 PSME1Q06323 249 aa19.33■□□□□ 0.68
USH1C-203ENST00000526181 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
USH1C-203ENST00000526181 SBNO1A3KN83 1393 aa19.32■□□□□ 0.68
USH1C-203ENST00000526181 TRPM3Q9HCF6 1732 aaPredicted RBP19.31■□□□□ 0.68
USH1C-203ENST00000526181 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
USH1C-203ENST00000526181 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
USH1C-203ENST00000526181 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
USH1C-203ENST00000526181 CENPJQ9HC77 1338 aaPredicted RBP19.3■□□□□ 0.68
USH1C-203ENST00000526181 RXRBP28702 533 aa19.3■□□□□ 0.68
USH1C-203ENST00000526181 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
USH1C-203ENST00000526181 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
USH1C-203ENST00000526181 TOPAZ1Q8N9V7 1692 aa19.3■□□□□ 0.68
USH1C-203ENST00000526181 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
USH1C-203ENST00000526181 MARF1Q9Y4F3 1742 aaKnown RBP19.29■□□□□ 0.68
USH1C-203ENST00000526181 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
USH1C-203ENST00000526181 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
USH1C-203ENST00000526181 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
USH1C-203ENST00000526181 USP21Q9UK80 565 aa19.28■□□□□ 0.68
USH1C-203ENST00000526181 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
USH1C-203ENST00000526181 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.68
USH1C-203ENST00000526181 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
USH1C-203ENST00000526181 ARHGEF10O15013 1369 aa19.27■□□□□ 0.68
USH1C-203ENST00000526181 GPRASP1Q5JY77 1395 aa19.27■□□□□ 0.68
USH1C-203ENST00000526181 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
USH1C-203ENST00000526181 BCL9LQ86UU0 1499 aa19.26■□□□□ 0.67
USH1C-203ENST00000526181 ALS2Q96Q42 1657 aa19.26■□□□□ 0.67
USH1C-203ENST00000526181 RGS12O14924 1447 aa19.25■□□□□ 0.67
USH1C-203ENST00000526181 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
USH1C-203ENST00000526181 HAP1P54257 671 aaPredicted RBP19.24■□□□□ 0.67
USH1C-203ENST00000526181 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
USH1C-203ENST00000526181 CABP2Q9NPB3 220 aa19.24■□□□□ 0.67
USH1C-203ENST00000526181 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
USH1C-203ENST00000526181 ATRNO75882 1429 aa19.23■□□□□ 0.67
USH1C-203ENST00000526181 POLR3AO14802 1390 aaPredicted RBP19.22■□□□□ 0.67
USH1C-203ENST00000526181 SLIT2O94813 1529 aa19.22■□□□□ 0.67
USH1C-203ENST00000526181 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
USH1C-203ENST00000526181 TRPC5Q9UL62 973 aaPredicted RBP19.22■□□□□ 0.67
USH1C-203ENST00000526181 CCDC61Q9Y6R9 512 aa19.22■□□□□ 0.67
USH1C-203ENST00000526181 ACEP12821 1306 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms