RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
CCS-203ENST00000526058 STAC3Q96MF2 364 aa24.76■■□□□ 1.55
CCS-203ENST00000526058 ORAI2Q96SN7 254 aa24.76■■□□□ 1.55
CCS-203ENST00000526058 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
CCS-203ENST00000526058 SIRT1Q96EB6 747 aa24.75■■□□□ 1.55
CCS-203ENST00000526058 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
CCS-203ENST00000526058 TRIM26Q12899 539 aaPredicted RBP24.71■■□□□ 1.55
CCS-203ENST00000526058 PRAM1Q96QH2 718 aa24.71■■□□□ 1.55
CCS-203ENST00000526058 NUTM2FA1L443 756 aa24.7■■□□□ 1.54
CCS-203ENST00000526058 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
CCS-203ENST00000526058 DLC1Q96QB1 1528 aa24.7■■□□□ 1.54
CCS-203ENST00000526058 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
CCS-203ENST00000526058 RGS17Q9UGC6 210 aaPredicted RBP24.69■■□□□ 1.54
CCS-203ENST00000526058 TRAK1Q9UPV9 953 aa24.69■■□□□ 1.54
CCS-203ENST00000526058 ESCO1Q5FWF5 840 aa24.68■■□□□ 1.54
CCS-203ENST00000526058 FMN2Q9NZ56 1722 aa24.68■■□□□ 1.54
CCS-203ENST00000526058 SPATA31A6Q5VVP1 1343 aa24.66■■□□□ 1.54
CCS-203ENST00000526058 LRP6O75581 1613 aa24.66■■□□□ 1.54
CCS-203ENST00000526058 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
CCS-203ENST00000526058 POGKQ9P215 609 aa24.66■■□□□ 1.54
CCS-203ENST00000526058 RGPD8O14715 1765 aaPredicted RBP24.63■■□□□ 1.53
CCS-203ENST00000526058 SOS2Q07890 1332 aaPredicted RBP24.62■■□□□ 1.53
CCS-203ENST00000526058 NEUROD1Q13562 356 aa24.62■■□□□ 1.53
CCS-203ENST00000526058 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
CCS-203ENST00000526058 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
CCS-203ENST00000526058 NUTM2BA6NNL0 878 aaPredicted RBP24.6■■□□□ 1.53
CCS-203ENST00000526058 NUTM2EB1AL46 878 aaPredicted RBP24.6■■□□□ 1.53
CCS-203ENST00000526058 NUTM2AQ8IVF1 878 aaPredicted RBP24.6■■□□□ 1.53
CCS-203ENST00000526058 PNPLA6Q8IY17 1366 aa24.59■■□□□ 1.53
CCS-203ENST00000526058 ARHGEF28Q8N1W1 1705 aaKnown RBP24.59■■□□□ 1.53
CCS-203ENST00000526058 SOCS7O14512 581 aa24.59■■□□□ 1.53
CCS-203ENST00000526058 FOXO3O43524 673 aa24.59■■□□□ 1.53
CCS-203ENST00000526058 NBPF1Q3BBV0 1214 aa24.58■■□□□ 1.53
CCS-203ENST00000526058 HIRIP3Q9BW71 556 aaPredicted RBP24.58■■□□□ 1.53
CCS-203ENST00000526058 NPHP3Q7Z494 1330 aa24.58■■□□□ 1.52
CCS-203ENST00000526058 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
CCS-203ENST00000526058 MEX3CQ5U5Q3 659 aaKnown RBP24.57■■□□□ 1.52
CCS-203ENST00000526058 ADGRB2O60241 1585 aa24.57■■□□□ 1.52
CCS-203ENST00000526058 MINK1Q8N4C8 1332 aaPredicted RBP24.57■■□□□ 1.52
CCS-203ENST00000526058 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
CCS-203ENST00000526058 PXDNQ92626 1479 aa24.56■■□□□ 1.52
CCS-203ENST00000526058 USP32Q8NFA0 1604 aa24.54■■□□□ 1.52
CCS-203ENST00000526058 KIF1AQ12756 1690 aa24.54■■□□□ 1.52
CCS-203ENST00000526058 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
CCS-203ENST00000526058 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
CCS-203ENST00000526058 ANKARQ7Z5J8 1434 aa24.49■■□□□ 1.51
CCS-203ENST00000526058 COL22A1Q8NFW1 1626 aaPredicted RBP24.47■■□□□ 1.51
CCS-203ENST00000526058 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
CCS-203ENST00000526058 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
CCS-203ENST00000526058 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
CCS-203ENST00000526058 TRPM1Q7Z4N2 1603 aa24.46■■□□□ 1.51
CCS-203ENST00000526058 TULP4Q9NRJ4 1543 aa24.45■■□□□ 1.51
CCS-203ENST00000526058 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
CCS-203ENST00000526058 ZNF772Q68DY9 489 aaPredicted RBP24.44■■□□□ 1.5
CCS-203ENST00000526058 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
CCS-203ENST00000526058 EIF3AQ14152 1382 aaKnown RBP24.43■■□□□ 1.5
CCS-203ENST00000526058 SPATA31A3Q5VYP0 1347 aa24.43■■□□□ 1.5
CCS-203ENST00000526058 AFF2P51816 1311 aa24.42■■□□□ 1.5
CCS-203ENST00000526058 PSME1Q06323 249 aa24.41■■□□□ 1.5
CCS-203ENST00000526058 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
CCS-203ENST00000526058 CDK19Q9BWU1 502 aa24.41■■□□□ 1.5
CCS-203ENST00000526058 ATP7BP35670 1465 aa24.38■■□□□ 1.49
CCS-203ENST00000526058 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
CCS-203ENST00000526058 NUDT16Q96DE0 195 aaKnown RBP24.38■■□□□ 1.49
CCS-203ENST00000526058 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
CCS-203ENST00000526058 TNS3Q68CZ2 1445 aa24.37■■□□□ 1.49
CCS-203ENST00000526058 ROCK2O75116 1388 aaKnown RBP24.37■■□□□ 1.49
CCS-203ENST00000526058 TONSLQ96HA7 1378 aa24.37■■□□□ 1.49
CCS-203ENST00000526058 QRICH2Q9H0J4 1663 aa24.37■■□□□ 1.49
CCS-203ENST00000526058 ITSN1Q15811 1721 aa24.36■■□□□ 1.49
CCS-203ENST00000526058 SBNO1A3KN83 1393 aa24.36■■□□□ 1.49
CCS-203ENST00000526058 MARF1Q9Y4F3 1742 aaKnown RBP24.35■■□□□ 1.49
CCS-203ENST00000526058 TRPM3Q9HCF6 1732 aaPredicted RBP24.34■■□□□ 1.49
CCS-203ENST00000526058 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
CCS-203ENST00000526058 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.49
CCS-203ENST00000526058 TOPAZ1Q8N9V7 1692 aa24.32■■□□□ 1.48
CCS-203ENST00000526058 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
CCS-203ENST00000526058 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
CCS-203ENST00000526058 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
CCS-203ENST00000526058 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
CCS-203ENST00000526058 QTRT2Q9H974 415 aaKnown RBP24.31■■□□□ 1.48
CCS-203ENST00000526058 RXRBP28702 533 aa24.3■■□□□ 1.48
CCS-203ENST00000526058 CABP2Q9NPB3 220 aa24.3■■□□□ 1.48
CCS-203ENST00000526058 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
CCS-203ENST00000526058 FNBP4Q8N3X1 1017 aaPredicted RBP24.29■■□□□ 1.48
CCS-203ENST00000526058 USP21Q9UK80 565 aa24.29■■□□□ 1.48
CCS-203ENST00000526058 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
CCS-203ENST00000526058 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
CCS-203ENST00000526058 ALS2Q96Q42 1657 aa24.28■■□□□ 1.48
CCS-203ENST00000526058 ABCA3Q99758 1704 aa24.27■■□□□ 1.48
CCS-203ENST00000526058 PLEKHG3A1L390 1219 aa24.25■■□□□ 1.47
CCS-203ENST00000526058 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
CCS-203ENST00000526058 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
CCS-203ENST00000526058 ACEP12821 1306 aa24.25■■□□□ 1.47
CCS-203ENST00000526058 CARD11Q9BXL7 1154 aa24.24■■□□□ 1.47
CCS-203ENST00000526058 POLR3AO14802 1390 aaPredicted RBP24.24■■□□□ 1.47
CCS-203ENST00000526058 RALGAPBQ86X10 1494 aa24.24■■□□□ 1.47
CCS-203ENST00000526058 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
CCS-203ENST00000526058 PPIP5K1Q6PFW1 1433 aa24.23■■□□□ 1.47
CCS-203ENST00000526058 BCL9LQ86UU0 1499 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms