RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	CFAP70	Q5T0N1	1121 aa		18.38	■□□□□ 0.53
RBBP4-215	ENST00000524393	WAPL	Q7Z5K2	1190 aa		18.38	■□□□□ 0.53
RBBP4-215	ENST00000524393	STAC3	Q96MF2	364 aa		18.38	■□□□□ 0.53
RBBP4-215	ENST00000524393	DCAF11	Q8TEB1	546 aa		18.37	■□□□□ 0.53
RBBP4-215	ENST00000524393	SIRT1	Q96EB6	747 aa		18.36	■□□□□ 0.53
RBBP4-215	ENST00000524393	KDM2A	Q9Y2K7	1162 aa		18.36	■□□□□ 0.53
RBBP4-215	ENST00000524393	ORAI2	Q96SN7	254 aa		18.35	■□□□□ 0.53
RBBP4-215	ENST00000524393	RGS17	Q9UGC6	210 aa	Predicted RBP	18.35	■□□□□ 0.53
RBBP4-215	ENST00000524393	ESCO1	Q5FWF5	840 aa		18.34	■□□□□ 0.53
RBBP4-215	ENST00000524393	DDX17	Q92841	729 aa	Known RBP	18.34	■□□□□ 0.53
RBBP4-215	ENST00000524393	LRP6	O75581	1613 aa		18.34	■□□□□ 0.53
RBBP4-215	ENST00000524393	PLEKHH1	Q9ULM0	1364 aa		18.33	■□□□□ 0.53
RBBP4-215	ENST00000524393	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.33	■□□□□ 0.52
RBBP4-215	ENST00000524393	NUTM2E	B1AL46	878 aa	Predicted RBP	18.33	■□□□□ 0.52
RBBP4-215	ENST00000524393	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.33	■□□□□ 0.52
RBBP4-215	ENST00000524393	FMN2	Q9NZ56	1722 aa		18.32	■□□□□ 0.52
RBBP4-215	ENST00000524393	NPHP3	Q7Z494	1330 aa		18.31	■□□□□ 0.52
RBBP4-215	ENST00000524393	POGK	Q9P215	609 aa		18.31	■□□□□ 0.52
RBBP4-215	ENST00000524393	DLC1	Q96QB1	1528 aa		18.31	■□□□□ 0.52
RBBP4-215	ENST00000524393	PNPLA6	Q8IY17	1366 aa		18.3	■□□□□ 0.52
RBBP4-215	ENST00000524393	NUTM2F	A1L443	756 aa		18.3	■□□□□ 0.52
RBBP4-215	ENST00000524393	PRAM1	Q96QH2	718 aa		18.3	■□□□□ 0.52
RBBP4-215	ENST00000524393	ADGRB1	O14514	1584 aa		18.3	■□□□□ 0.52
RBBP4-215	ENST00000524393	SOS2	Q07890	1332 aa	Predicted RBP	18.29	■□□□□ 0.52
RBBP4-215	ENST00000524393	ZNF772	Q68DY9	489 aa	Predicted RBP	18.29	■□□□□ 0.52
RBBP4-215	ENST00000524393	POTEA	Q6S8J7	498 aa		18.29	■□□□□ 0.52
RBBP4-215	ENST00000524393	KIF1A	Q12756	1690 aa		18.28	■□□□□ 0.52
RBBP4-215	ENST00000524393	SAFB2	Q14151	953 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
RBBP4-215	ENST00000524393	TRAK1	Q9UPV9	953 aa		18.27	■□□□□ 0.52
RBBP4-215	ENST00000524393	FOXO3	O43524	673 aa		18.25	■□□□□ 0.51
RBBP4-215	ENST00000524393	ADGRB2	O60241	1585 aa		18.23	■□□□□ 0.51
RBBP4-215	ENST00000524393	PXDN	Q92626	1479 aa		18.23	■□□□□ 0.51
RBBP4-215	ENST00000524393	EIF3A	Q14152	1382 aa	Known RBP	18.22	■□□□□ 0.51
RBBP4-215	ENST00000524393	C8orf37	Q96NL8	207 aa		18.22	■□□□□ 0.51
RBBP4-215	ENST00000524393	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.22	■□□□□ 0.51
RBBP4-215	ENST00000524393	KIAA1210	Q9ULL0	1709 aa		18.21	■□□□□ 0.51
RBBP4-215	ENST00000524393	XPC	Q01831	940 aa	Predicted RBP	18.21	■□□□□ 0.51
RBBP4-215	ENST00000524393	ANKAR	Q7Z5J8	1434 aa		18.21	■□□□□ 0.51
RBBP4-215	ENST00000524393	AFF2	P51816	1311 aa		18.21	■□□□□ 0.51
RBBP4-215	ENST00000524393	RGPD8	O14715	1765 aa	Predicted RBP	18.2	■□□□□ 0.5
RBBP4-215	ENST00000524393	ADAMTS2	O95450	1211 aa		18.2	■□□□□ 0.5
RBBP4-215	ENST00000524393	PHF8	Q9UPP1	1060 aa		18.2	■□□□□ 0.5
RBBP4-215	ENST00000524393	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.19	■□□□□ 0.5
RBBP4-215	ENST00000524393	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.19	■□□□□ 0.5
RBBP4-215	ENST00000524393	PSME1	Q06323	249 aa		18.18	■□□□□ 0.5
RBBP4-215	ENST00000524393	NGLY1	Q96IV0	654 aa		18.18	■□□□□ 0.5
RBBP4-215	ENST00000524393	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.18	■□□□□ 0.5
RBBP4-215	ENST00000524393	KRT28	Q7Z3Y7	464 aa		18.17	■□□□□ 0.5
RBBP4-215	ENST00000524393	RXRB	P28702	533 aa		18.16	■□□□□ 0.5
RBBP4-215	ENST00000524393	TULP4	Q9NRJ4	1543 aa		18.16	■□□□□ 0.5
RBBP4-215	ENST00000524393	USP32	Q8NFA0	1604 aa		18.16	■□□□□ 0.5
RBBP4-215	ENST00000524393	SPATA31A3	Q5VYP0	1347 aa		18.15	■□□□□ 0.5
RBBP4-215	ENST00000524393	WASL	O00401	505 aa	Predicted RBP	18.14	■□□□□ 0.49
RBBP4-215	ENST00000524393	TNS3	Q68CZ2	1445 aa		18.13	■□□□□ 0.49
RBBP4-215	ENST00000524393	MARF1	Q9Y4F3	1742 aa	Known RBP	18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	HAP1	P54257	671 aa	Predicted RBP	18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	NEUROD1	Q13562	356 aa		18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	PMFBP1	Q8TBY8	1022 aa		18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	QTRT2	Q9H974	415 aa	Known RBP	18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	ITSN1	Q15811	1721 aa		18.12	■□□□□ 0.49
RBBP4-215	ENST00000524393	TRIM26	Q12899	539 aa	Predicted RBP	18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	L3MBTL2	Q969R5	705 aa		18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	SIN3A	Q96ST3	1273 aa		18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	USP21	Q9UK80	565 aa		18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	SBNO1	A3KN83	1393 aa		18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	GPRASP1	Q5JY77	1395 aa		18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.11	■□□□□ 0.49
RBBP4-215	ENST00000524393	ARHGEF10	O15013	1369 aa		18.1	■□□□□ 0.49
RBBP4-215	ENST00000524393	LMOD2	Q6P5Q4	547 aa		18.1	■□□□□ 0.49
RBBP4-215	ENST00000524393	RBM6	P78332	1123 aa	Known RBP	18.09	■□□□□ 0.49
RBBP4-215	ENST00000524393	NBPF1	Q3BBV0	1214 aa		18.09	■□□□□ 0.49
RBBP4-215	ENST00000524393	PRR36	Q9H6K5	1346 aa		18.08	■□□□□ 0.49
RBBP4-215	ENST00000524393	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.08	■□□□□ 0.48
RBBP4-215	ENST00000524393	NGDN	Q8NEJ9	315 aa	Known RBP	18.08	■□□□□ 0.48
RBBP4-215	ENST00000524393	TRPC5	Q9UL62	973 aa	Predicted RBP	18.08	■□□□□ 0.48
RBBP4-215	ENST00000524393	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.06	■□□□□ 0.48
RBBP4-215	ENST00000524393	ATP7B	P35670	1465 aa		18.06	■□□□□ 0.48
RBBP4-215	ENST00000524393	TRPM1	Q7Z4N2	1603 aa		18.05	■□□□□ 0.48
RBBP4-215	ENST00000524393	NUDT16	Q96DE0	195 aa	Known RBP	18.05	■□□□□ 0.48
RBBP4-215	ENST00000524393	CDK19	Q9BWU1	502 aa		18.05	■□□□□ 0.48
RBBP4-215	ENST00000524393	TRPM3	Q9HCF6	1732 aa	Predicted RBP	18.04	■□□□□ 0.48
RBBP4-215	ENST00000524393	PLEKHG5	O94827	1062 aa		18.04	■□□□□ 0.48
RBBP4-215	ENST00000524393	QRICH2	Q9H0J4	1663 aa		18.03	■□□□□ 0.48
RBBP4-215	ENST00000524393	ABCA3	Q99758	1704 aa		18.03	■□□□□ 0.48
RBBP4-215	ENST00000524393	ROCK2	O75116	1388 aa	Known RBP	18.03	■□□□□ 0.48
RBBP4-215	ENST00000524393	RGS12	O14924	1447 aa		18.02	■□□□□ 0.48
RBBP4-215	ENST00000524393	ATRN	O75882	1429 aa		18.02	■□□□□ 0.48
RBBP4-215	ENST00000524393	PAK3	O75914	559 aa	Predicted RBP	18.02	■□□□□ 0.48
RBBP4-215	ENST00000524393	SRPK2	P78362	688 aa	Known RBP	18.02	■□□□□ 0.48
RBBP4-215	ENST00000524393	TOPAZ1	Q8N9V7	1692 aa		18.02	■□□□□ 0.47
RBBP4-215	ENST00000524393	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	CABLES1	Q8TDN4	633 aa		18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	CCDC61	Q9Y6R9	512 aa		18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	ALS2	Q96Q42	1657 aa		18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	TONSL	Q96HA7	1378 aa		18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	BCL9L	Q86UU0	1499 aa		18.01	■□□□□ 0.47
RBBP4-215	ENST00000524393	UNC5CL	Q8IV45	518 aa		17.99	■□□□□ 0.47
RBBP4-215	ENST00000524393	SLIT2	O94813	1529 aa		17.98	■□□□□ 0.47
RBBP4-215	ENST00000524393	PLCH1	Q4KWH8	1693 aa		17.97	■□□□□ 0.47
RBBP4-215	ENST00000524393	POLR3A	O14802	1390 aa	Predicted RBP	17.97	■□□□□ 0.47

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