RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-216ENST00000521918 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-216ENST00000521918 DDX12PQ92771 950 aa9.37□□□□□ -0.91
SPIDR-216ENST00000521918 ARHGEF5Q12774 1597 aa9.37□□□□□ -0.91
SPIDR-216ENST00000521918 ARID4BQ4LE39 1312 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-216ENST00000521918 HNRNPMP52272 730 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPIDR-216ENST00000521918 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-216ENST00000521918 CCDC141Q6ZP82 1450 aa9.35□□□□□ -0.91
SPIDR-216ENST00000521918 GRXCR2A6NFK2 248 aa9.35□□□□□ -0.91
SPIDR-216ENST00000521918 OSBPP22059 807 aa9.35□□□□□ -0.91
SPIDR-216ENST00000521918 MYOM3Q5VTT5 1437 aa9.35□□□□□ -0.91
SPIDR-216ENST00000521918 LHX6Q9UPM6 363 aa9.35□□□□□ -0.91
SPIDR-216ENST00000521918 RTEL1-TNFRSF6BF6WH68 1400 aa9.34□□□□□ -0.91
SPIDR-216ENST00000521918 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
SPIDR-216ENST00000521918 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
SPIDR-216ENST00000521918 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
SPIDR-216ENST00000521918 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
SPIDR-216ENST00000521918 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
SPIDR-216ENST00000521918 ADGBQ8N7X0 1667 aa9.33□□□□□ -0.92
SPIDR-216ENST00000521918 PHF14O94880 888 aa9.33□□□□□ -0.92
SPIDR-216ENST00000521918 FOSBP53539 338 aa9.33□□□□□ -0.92
SPIDR-216ENST00000521918 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
SPIDR-216ENST00000521918 LMTK3Q96Q04 1460 aa9.33□□□□□ -0.92
SPIDR-216ENST00000521918 RBM26Q5T8P6 1007 aaKnown RBP9.32□□□□□ -0.92
SPIDR-216ENST00000521918 A2MP01023 1474 aa9.32□□□□□ -0.92
SPIDR-216ENST00000521918 MAST1Q9Y2H9 1570 aa9.32□□□□□ -0.92
SPIDR-216ENST00000521918 ERBB3P21860 1342 aa9.31□□□□□ -0.92
SPIDR-216ENST00000521918 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
SPIDR-216ENST00000521918 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
SPIDR-216ENST00000521918 TCOF1Q13428 1488 aaKnown RBP9.3□□□□□ -0.92
SPIDR-216ENST00000521918 POTEMA6NI47 508 aa9.3□□□□□ -0.92
SPIDR-216ENST00000521918 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
SPIDR-216ENST00000521918 MLECQ14165 292 aa9.3□□□□□ -0.92
SPIDR-216ENST00000521918 MROH2AA6NES4 1674 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 CROCC2H7BZ55 1655 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 PSDA5PKW4 1024 aaPredicted RBP9.29□□□□□ -0.92
SPIDR-216ENST00000521918 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 EPAS1Q99814 870 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 PTPN23Q9H3S7 1636 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 FGD6Q6ZV73 1430 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 C3P01024 1663 aa9.29□□□□□ -0.92
SPIDR-216ENST00000521918 SHANK2Q9UPX8 1470 aa9.28□□□□□ -0.92
SPIDR-216ENST00000521918 DHX29Q7Z478 1369 aaKnown RBP9.28□□□□□ -0.92
SPIDR-216ENST00000521918 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-216ENST00000521918 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
SPIDR-216ENST00000521918 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
SPIDR-216ENST00000521918 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
SPIDR-216ENST00000521918 CNTLNQ9NXG0 1405 aa9.28□□□□□ -0.92
SPIDR-216ENST00000521918 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.93
SPIDR-216ENST00000521918 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
SPIDR-216ENST00000521918 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
SPIDR-216ENST00000521918 DNMT1P26358 1616 aaKnown RBP9.27□□□□□ -0.93
SPIDR-216ENST00000521918 FAM135AQ9P2D6 1515 aa9.26□□□□□ -0.93
SPIDR-216ENST00000521918 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
SPIDR-216ENST00000521918 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
SPIDR-216ENST00000521918 RNF17Q9BXT8 1623 aaKnown RBP9.26□□□□□ -0.93
SPIDR-216ENST00000521918 ABCC5O15440 1437 aa9.25□□□□□ -0.93
SPIDR-216ENST00000521918 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
SPIDR-216ENST00000521918 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
SPIDR-216ENST00000521918 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
SPIDR-216ENST00000521918 ADAM33Q9BZ11 813 aa9.25□□□□□ -0.93
SPIDR-216ENST00000521918 CLTCQ00610 1675 aaKnown RBP9.25□□□□□ -0.93
SPIDR-216ENST00000521918 MROH1Q8NDA8 1641 aa9.24□□□□□ -0.93
SPIDR-216ENST00000521918 EIF2AK4Q9P2K8 1649 aaKnown RBP9.24□□□□□ -0.93
SPIDR-216ENST00000521918 DAPK1P53355 1430 aa9.24□□□□□ -0.93
SPIDR-216ENST00000521918 GPR37O15354 613 aa9.24□□□□□ -0.93
SPIDR-216ENST00000521918 CEBPAP49715 358 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-216ENST00000521918 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
SPIDR-216ENST00000521918 NPATQ14207 1427 aa9.23□□□□□ -0.93
SPIDR-216ENST00000521918 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
SPIDR-216ENST00000521918 TSR1Q2NL82 804 aaKnown RBP9.23□□□□□ -0.93
SPIDR-216ENST00000521918 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
SPIDR-216ENST00000521918 SETD1BQ9UPS6 1966 aaKnown RBP9.23□□□□□ -0.93
SPIDR-216ENST00000521918 PTPRKQ15262 1439 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 DUOX2Q9NRD8 1548 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 MAP3K7O43318 606 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 CDHR5Q9HBB8 845 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 ZMYM3Q14202 1370 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 UHRF1BP1Q6BDS2 1440 aa9.22□□□□□ -0.93
SPIDR-216ENST00000521918 ADGRL2O95490 1459 aa9.21□□□□□ -0.93
SPIDR-216ENST00000521918 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.93
SPIDR-216ENST00000521918 TSPY4P0CV99 314 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 TSPY10P0CW01 314 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-216ENST00000521918 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 ZNF687Q8N1G0 1237 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-216ENST00000521918 ERBINQ96RT1 1412 aa9.21□□□□□ -0.94
SPIDR-216ENST00000521918 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-216ENST00000521918 DEPDC5O75140 1603 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 MYO3AQ8NEV4 1616 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 ZC3H13Q5T200 1668 aaKnown RBP9.2□□□□□ -0.94
SPIDR-216ENST00000521918 PTGDRQ13258 359 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 PZPP20742 1482 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 ABCC3O15438 1527 aa9.2□□□□□ -0.94
SPIDR-216ENST00000521918 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms