RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ILDR2	Q71H61	639 aa		35.07	■■■■□ 3.2
CNOT7-204	ENST00000518885	NHSL1	Q5SYE7	1610 aa		35.06	■■■■□ 3.2
CNOT7-204	ENST00000518885	LRRC59	Q96AG4	307 aa	Known RBP	35.04	■■■■□ 3.2
CNOT7-204	ENST00000518885	DLC1	Q96QB1	1528 aa		35.03	■■■■□ 3.2
CNOT7-204	ENST00000518885	TRIM26	Q12899	539 aa	Predicted RBP	35.02	■■■■□ 3.2
CNOT7-204	ENST00000518885	POGK	Q9P215	609 aa		35.02	■■■■□ 3.2
CNOT7-204	ENST00000518885	SHPRH	Q149N8	1683 aa		35.01	■■■■□ 3.2
CNOT7-204	ENST00000518885	PLEKHH1	Q9ULM0	1364 aa		35	■■■■□ 3.19
CNOT7-204	ENST00000518885	ADGRB1	O14514	1584 aa		35	■■■■□ 3.19
CNOT7-204	ENST00000518885	ESCO1	Q5FWF5	840 aa		34.98	■■■■□ 3.19
CNOT7-204	ENST00000518885	PRAM1	Q96QH2	718 aa		34.98	■■■■□ 3.19
CNOT7-204	ENST00000518885	ORAI2	Q96SN7	254 aa		34.98	■■■■□ 3.19
CNOT7-204	ENST00000518885	MEX3C	Q5U5Q3	659 aa	Known RBP	34.94	■■■■□ 3.18
CNOT7-204	ENST00000518885	NPHP3	Q7Z494	1330 aa		34.93	■■■■□ 3.18
CNOT7-204	ENST00000518885	TRAK1	Q9UPV9	953 aa		34.93	■■■■□ 3.18
CNOT7-204	ENST00000518885	SOCS7	O14512	581 aa		34.91	■■■■□ 3.18
CNOT7-204	ENST00000518885	FMN2	Q9NZ56	1722 aa		34.9	■■■■□ 3.18
CNOT7-204	ENST00000518885	SAFB2	Q14151	953 aa	Known RBP eCLIP	34.9	■■■■□ 3.18
CNOT7-204	ENST00000518885	DDX17	Q92841	729 aa	Known RBP	34.9	■■■■□ 3.18
CNOT7-204	ENST00000518885	SOS2	Q07890	1332 aa	Predicted RBP	34.89	■■■■□ 3.18
CNOT7-204	ENST00000518885	KIAA1210	Q9ULL0	1709 aa		34.88	■■■■□ 3.17
CNOT7-204	ENST00000518885	NUTM2F	A1L443	756 aa		34.87	■■■■□ 3.17
CNOT7-204	ENST00000518885	EIF3A	Q14152	1382 aa	Known RBP	34.87	■■■■□ 3.17
CNOT7-204	ENST00000518885	KIF1A	Q12756	1690 aa		34.84	■■■■□ 3.17
CNOT7-204	ENST00000518885	PNPLA6	Q8IY17	1366 aa		34.84	■■■■□ 3.17
CNOT7-204	ENST00000518885	ADGRB2	O60241	1585 aa		34.83	■■■■□ 3.17
CNOT7-204	ENST00000518885	LRP6	O75581	1613 aa		34.82	■■■■□ 3.16
CNOT7-204	ENST00000518885	NUTM2B	A6NNL0	878 aa	Predicted RBP	34.82	■■■■□ 3.16
CNOT7-204	ENST00000518885	NUTM2E	B1AL46	878 aa	Predicted RBP	34.82	■■■■□ 3.16
CNOT7-204	ENST00000518885	NUTM2A	Q8IVF1	878 aa	Predicted RBP	34.82	■■■■□ 3.16
CNOT7-204	ENST00000518885	RGS17	Q9UGC6	210 aa	Predicted RBP	34.81	■■■■□ 3.16
CNOT7-204	ENST00000518885	ANKAR	Q7Z5J8	1434 aa		34.81	■■■■□ 3.16
CNOT7-204	ENST00000518885	FOXO3	O43524	673 aa		34.8	■■■■□ 3.16
CNOT7-204	ENST00000518885	NEUROD1	Q13562	356 aa		34.79	■■■■□ 3.16
CNOT7-204	ENST00000518885	L3MBTL2	Q969R5	705 aa		34.78	■■■■□ 3.16
CNOT7-204	ENST00000518885	SIN3A	Q96ST3	1273 aa		34.78	■■■■□ 3.16
CNOT7-204	ENST00000518885	ZNF772	Q68DY9	489 aa	Predicted RBP	34.77	■■■■□ 3.16
CNOT7-204	ENST00000518885	PHF8	Q9UPP1	1060 aa		34.76	■■■■□ 3.16
CNOT7-204	ENST00000518885	MINK1	Q8N4C8	1332 aa	Predicted RBP	34.76	■■■■□ 3.15
CNOT7-204	ENST00000518885	PXDN	Q92626	1479 aa		34.75	■■■■□ 3.15
CNOT7-204	ENST00000518885	ARHGEF28	Q8N1W1	1705 aa	Known RBP	34.74	■■■■□ 3.15
CNOT7-204	ENST00000518885	HIRIP3	Q9BW71	556 aa	Predicted RBP	34.73	■■■■□ 3.15
CNOT7-204	ENST00000518885	PSME1	Q06323	249 aa		34.72	■■■■□ 3.15
CNOT7-204	ENST00000518885	WASL	O00401	505 aa	Predicted RBP	34.71	■■■■□ 3.15
CNOT7-204	ENST00000518885	XPC	Q01831	940 aa	Predicted RBP	34.68	■■■■□ 3.14
CNOT7-204	ENST00000518885	POTEA	Q6S8J7	498 aa		34.68	■■■■□ 3.14
CNOT7-204	ENST00000518885	TULP4	Q9NRJ4	1543 aa		34.68	■■■■□ 3.14
CNOT7-204	ENST00000518885	COL22A1	Q8NFW1	1626 aa	Predicted RBP	34.67	■■■■□ 3.14
CNOT7-204	ENST00000518885	KRT28	Q7Z3Y7	464 aa		34.67	■■■■□ 3.14
CNOT7-204	ENST00000518885	NBPF1	Q3BBV0	1214 aa		34.66	■■■■□ 3.14
CNOT7-204	ENST00000518885	RGPD8	O14715	1765 aa	Predicted RBP	34.64	■■■■□ 3.14
CNOT7-204	ENST00000518885	C8orf37	Q96NL8	207 aa		34.63	■■■■□ 3.13
CNOT7-204	ENST00000518885	AFF2	P51816	1311 aa		34.61	■■■■□ 3.13
CNOT7-204	ENST00000518885	SPATA31A3	Q5VYP0	1347 aa		34.61	■■■■□ 3.13
CNOT7-204	ENST00000518885	ADAMTS2	O95450	1211 aa		34.61	■■■■□ 3.13
CNOT7-204	ENST00000518885	USP32	Q8NFA0	1604 aa		34.61	■■■■□ 3.13
CNOT7-204	ENST00000518885	TONSL	Q96HA7	1378 aa		34.61	■■■■□ 3.13
CNOT7-204	ENST00000518885	GPRASP1	Q5JY77	1395 aa		34.6	■■■■□ 3.13
CNOT7-204	ENST00000518885	CENPJ	Q9HC77	1338 aa	Predicted RBP	34.59	■■■■□ 3.13
CNOT7-204	ENST00000518885	NGLY1	Q96IV0	654 aa		34.59	■■■■□ 3.13
CNOT7-204	ENST00000518885	SBNO1	A3KN83	1393 aa		34.59	■■■■□ 3.13
CNOT7-204	ENST00000518885	PMFBP1	Q8TBY8	1022 aa		34.58	■■■■□ 3.13
CNOT7-204	ENST00000518885	TNS3	Q68CZ2	1445 aa		34.57	■■■■□ 3.13
CNOT7-204	ENST00000518885	TRPM1	Q7Z4N2	1603 aa		34.57	■■■■□ 3.12
CNOT7-204	ENST00000518885	ROCK2	O75116	1388 aa	Known RBP	34.57	■■■■□ 3.12
CNOT7-204	ENST00000518885	ARHGEF10	O15013	1369 aa		34.56	■■■■□ 3.12
CNOT7-204	ENST00000518885	ITSN1	Q15811	1721 aa		34.55	■■■■□ 3.12
CNOT7-204	ENST00000518885	NGDN	Q8NEJ9	315 aa	Known RBP	34.54	■■■■□ 3.12
CNOT7-204	ENST00000518885	CDK19	Q9BWU1	502 aa		34.54	■■■■□ 3.12
CNOT7-204	ENST00000518885	PRR36	Q9H6K5	1346 aa		34.54	■■■■□ 3.12
CNOT7-204	ENST00000518885	NUDT16	Q96DE0	195 aa	Known RBP	34.53	■■■■□ 3.12
CNOT7-204	ENST00000518885	RXRB	P28702	533 aa		34.51	■■■■□ 3.12
CNOT7-204	ENST00000518885	HAP1	P54257	671 aa	Predicted RBP	34.51	■■■■□ 3.12
CNOT7-204	ENST00000518885	ATP7B	P35670	1465 aa		34.51	■■■■□ 3.11
CNOT7-204	ENST00000518885	LMOD2	Q6P5Q4	547 aa		34.5	■■■■□ 3.11
CNOT7-204	ENST00000518885	CCDC61	Q9Y6R9	512 aa		34.47	■■■■□ 3.11
CNOT7-204	ENST00000518885	SRPK2	P78362	688 aa	Known RBP	34.46	■■■■□ 3.11
CNOT7-204	ENST00000518885	USP21	Q9UK80	565 aa		34.46	■■■■□ 3.11
CNOT7-204	ENST00000518885	QRICH2	Q9H0J4	1663 aa		34.45	■■■■□ 3.11
CNOT7-204	ENST00000518885	QTRT2	Q9H974	415 aa	Known RBP	34.45	■■■■□ 3.11
CNOT7-204	ENST00000518885	FNBP4	Q8N3X1	1017 aa	Predicted RBP	34.44	■■■■□ 3.1
CNOT7-204	ENST00000518885	MARF1	Q9Y4F3	1742 aa	Known RBP	34.41	■■■■□ 3.1
CNOT7-204	ENST00000518885	CDK12	Q9NYV4	1490 aa	Predicted RBP	34.41	■■■■□ 3.1
CNOT7-204	ENST00000518885	RBM6	P78332	1123 aa	Known RBP	34.41	■■■■□ 3.1
CNOT7-204	ENST00000518885	TRPC5	Q9UL62	973 aa	Predicted RBP	34.41	■■■■□ 3.1
CNOT7-204	ENST00000518885	EVC2	Q86UK5	1308 aa		34.4	■■■■□ 3.1
CNOT7-204	ENST00000518885	PAK3	O75914	559 aa	Predicted RBP	34.39	■■■■□ 3.1
CNOT7-204	ENST00000518885	NBPF8	Q3BBV2	869 aa		34.39	■■■■□ 3.1
CNOT7-204	ENST00000518885	TOPAZ1	Q8N9V7	1692 aa		34.38	■■■■□ 3.09
CNOT7-204	ENST00000518885	CARD11	Q9BXL7	1154 aa		34.38	■■■■□ 3.09
CNOT7-204	ENST00000518885	TRPM3	Q9HCF6	1732 aa	Predicted RBP	34.38	■■■■□ 3.09
CNOT7-204	ENST00000518885	PLEKHG3	A1L390	1219 aa		34.37	■■■■□ 3.09
CNOT7-204	ENST00000518885	POLR3A	O14802	1390 aa	Predicted RBP	34.36	■■■■□ 3.09
CNOT7-204	ENST00000518885	RALGAPB	Q86X10	1494 aa		34.36	■■■■□ 3.09
CNOT7-204	ENST00000518885	ACE	P12821	1306 aa		34.34	■■■■□ 3.09
CNOT7-204	ENST00000518885	PPIP5K1	Q6PFW1	1433 aa		34.33	■■■■□ 3.09
CNOT7-204	ENST00000518885	CABP2	Q9NPB3	220 aa		34.33	■■■■□ 3.09
CNOT7-204	ENST00000518885	ALS2	Q96Q42	1657 aa		34.32	■■■■□ 3.08
CNOT7-204	ENST00000518885	CABLES1	Q8TDN4	633 aa		34.32	■■■■□ 3.08
CNOT7-204	ENST00000518885	CLSPN	Q9HAW4	1339 aa		34.31	■■■■□ 3.08

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms