RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	KIF3B	O15066	747 aa		7.95	□□□□□ -1.14
NREP-222	ENST00000514515	SLC24A1	O60721	1099 aa		7.95	□□□□□ -1.14
NREP-222	ENST00000514515	MVP	Q14764	893 aa	Known RBP	7.95	□□□□□ -1.14
NREP-222	ENST00000514515	NINL	Q9Y2I6	1382 aa		7.95	□□□□□ -1.14
NREP-222	ENST00000514515	LNPK	Q9C0E8	428 aa		7.95	□□□□□ -1.14
NREP-222	ENST00000514515	SPAG9	O60271	1321 aa	Known RBP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	NCL	P19338	710 aa	Known RBP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	NUP160	Q12769	1436 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	AAMP	Q13685	434 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	OSCAR	Q8IYS5	282 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	PRDM15	P57071	1507 aa	Predicted RBP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	CLCN1	P35523	988 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	GBP4	Q96PP9	640 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	SCAF11	Q99590	1463 aa	Known RBP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	ESPN	B1AK53	854 aa		7.94	□□□□□ -1.14
NREP-222	ENST00000514515	EXOSC9	Q06265	439 aa	Known RBP	7.94	□□□□□ -1.14
NREP-222	ENST00000514515	WDR63	Q8IWG1	891 aa		7.93	□□□□□ -1.14
NREP-222	ENST00000514515	TMEM132E	Q6IEE7	984 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	ADGRF5	Q8IZF2	1346 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	SYCP2	Q9BX26	1530 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	CROCC2	H7BZ55	1655 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	FSD2	A1L4K1	749 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	GOLGA6L22	H0YM25	854 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	DDX19B	Q9UMR2	479 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.92	□□□□□ -1.14
NREP-222	ENST00000514515	PKNOX2	Q96KN3	472 aa		7.92	□□□□□ -1.14
NREP-222	ENST00000514515	ANKRD45	Q5TZF3	282 aa		7.91	□□□□□ -1.14
NREP-222	ENST00000514515	TNPO1	Q92973	898 aa	Known RBP	7.91	□□□□□ -1.14
NREP-222	ENST00000514515	STAC3	Q96MF2	364 aa		7.91	□□□□□ -1.14
NREP-222	ENST00000514515	NOB1	Q9ULX3	412 aa	Known RBP	7.91	□□□□□ -1.14
NREP-222	ENST00000514515	TRIM27	P14373	513 aa		7.91	□□□□□ -1.14
NREP-222	ENST00000514515	SSH1	Q8WYL5	1049 aa		7.91	□□□□□ -1.14
NREP-222	ENST00000514515	NSD3	Q9BZ95	1437 aa		7.91	□□□□□ -1.14
NREP-222	ENST00000514515	KANK1	Q14678	1352 aa		7.9	□□□□□ -1.14
NREP-222	ENST00000514515	NPC1L1	Q9UHC9	1359 aa		7.9	□□□□□ -1.14
NREP-222	ENST00000514515	CDC42BPA	Q5VT25	1732 aa		7.9	□□□□□ -1.14
NREP-222	ENST00000514515	ATF7IP	Q6VMQ6	1270 aa		7.9	□□□□□ -1.14
NREP-222	ENST00000514515	TMEM57	Q8N5G2	664 aa		7.9	□□□□□ -1.14
NREP-222	ENST00000514515	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.9	□□□□□ -1.14
NREP-222	ENST00000514515	IPO8	O15397	1037 aa	Known RBP	7.9	□□□□□ -1.15
NREP-222	ENST00000514515	DDX49	Q9Y6V7	483 aa	Known RBP	7.9	□□□□□ -1.15
NREP-222	ENST00000514515	POLR3A	O14802	1390 aa	Predicted RBP	7.89	□□□□□ -1.15
NREP-222	ENST00000514515	ZMYND15	Q9H091	742 aa		7.89	□□□□□ -1.15
NREP-222	ENST00000514515	RRP9	O43818	475 aa	Known RBP	7.89	□□□□□ -1.15
NREP-222	ENST00000514515	MSN	P26038	577 aa	Known RBP	7.89	□□□□□ -1.15
NREP-222	ENST00000514515	ADCY10	Q96PN6	1610 aa		7.89	□□□□□ -1.15
NREP-222	ENST00000514515	ELL2	O00472	640 aa	Predicted RBP	7.89	□□□□□ -1.15
NREP-222	ENST00000514515	C1orf115	Q9H7X2	142 aa		7.89	□□□□□ -1.15
NREP-222	ENST00000514515	RIPK4	P57078	832 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	ARHGEF5	Q12774	1597 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.88	□□□□□ -1.15
NREP-222	ENST00000514515	SCAPER	Q9BY12	1400 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	SAMD9L	Q8IVG5	1584 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	NASP	P49321	788 aa	Predicted RBP	7.88	□□□□□ -1.15
NREP-222	ENST00000514515	GAS2L3	Q86XJ1	694 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	ARID3A	Q99856	593 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	GGNBP2	Q9H3C7	697 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	STK26	Q9P289	416 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	ABCC2	Q92887	1545 aa		7.88	□□□□□ -1.15
NREP-222	ENST00000514515	SRPK2	P78362	688 aa	Known RBP	7.87	□□□□□ -1.15
NREP-222	ENST00000514515	RBM42	Q9BTD8	480 aa	Known RBP	7.87	□□□□□ -1.15
NREP-222	ENST00000514515	HDAC1	Q13547	482 aa	Predicted RBP	7.87	□□□□□ -1.15
NREP-222	ENST00000514515	CHD1L	Q86WJ1	897 aa		7.87	□□□□□ -1.15
NREP-222	ENST00000514515	CABP2	Q9NPB3	220 aa		7.87	□□□□□ -1.15
NREP-222	ENST00000514515	ERBB4	Q15303	1308 aa		7.87	□□□□□ -1.15
NREP-222	ENST00000514515	NLRP1	Q9C000	1473 aa		7.87	□□□□□ -1.15
NREP-222	ENST00000514515	ABCA8	O94911	1581 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	SSFA2	P28290	1259 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	TMPO	P42166	694 aa	Known RBP	7.86	□□□□□ -1.15
NREP-222	ENST00000514515	ZBTB7C	A1YPR0	619 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	APBB1	O00213	710 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	GGT6	Q6P531	493 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	KIAA1211	Q6ZU35	1233 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	ISY1	Q9ULR0	285 aa	Known RBP	7.86	□□□□□ -1.15
NREP-222	ENST00000514515	CALD1	Q05682	793 aa	Known RBP	7.86	□□□□□ -1.15
NREP-222	ENST00000514515	MCTP1	Q6DN14	999 aa		7.86	□□□□□ -1.15
NREP-222	ENST00000514515	DUOX2	Q9NRD8	1548 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515		K7ELQ4	463 aa	Predicted RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	RBM10	P98175	930 aa	Known RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	CCDC27	Q2M243	656 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515	SMC5	Q8IY18	1101 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515	SYNM	O15061	1565 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515	TRAPPC8	Q9Y2L5	1435 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515	PTMS	P20962	102 aa		7.85	□□□□□ -1.15
NREP-222	ENST00000514515	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	CAVIN1	Q6NZI2	390 aa	Known RBP	7.85	□□□□□ -1.15
NREP-222	ENST00000514515	NUCB1	Q02818	461 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	RAB3GAP1	Q15042	981 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	ZBTB40	Q9NUA8	1239 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	FAM13B	Q9NYF5	915 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	KIF16B	Q96L93	1317 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	CD2BP2	O95400	341 aa	Known RBP	7.84	□□□□□ -1.15
NREP-222	ENST00000514515	CT47B1	P0C2W7	299 aa	Predicted RBP	7.84	□□□□□ -1.15
NREP-222	ENST00000514515	SNX21	Q969T3	373 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	ERVK-7	P63135	1459 aa		7.84	□□□□□ -1.15
NREP-222	ENST00000514515	RBM25	P49756	843 aa	Known RBP	7.84	□□□□□ -1.16
NREP-222	ENST00000514515	CCDC173	Q0VFZ6	552 aa		7.84	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 959.9 ms