RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.5
SMN2-210ENST00000511812 CDC42BPGQ6DT37 1551 aa24.38■■□□□ 1.49
SMN2-210ENST00000511812 PRAM1Q96QH2 718 aa24.38■■□□□ 1.49
SMN2-210ENST00000511812 ORAI2Q96SN7 254 aa24.37■■□□□ 1.49
SMN2-210ENST00000511812 TRAK1Q9UPV9 953 aa24.37■■□□□ 1.49
SMN2-210ENST00000511812 SAFB2Q14151 953 aaKnown RBP eCLIP24.36■■□□□ 1.49
SMN2-210ENST00000511812 ADGRB1O14514 1584 aa24.35■■□□□ 1.49
SMN2-210ENST00000511812 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
SMN2-210ENST00000511812 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
SMN2-210ENST00000511812 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
SMN2-210ENST00000511812 LRRC59Q96AG4 307 aaKnown RBP24.35■■□□□ 1.49
SMN2-210ENST00000511812 SIN3AQ96ST3 1273 aa24.35■■□□□ 1.49
SMN2-210ENST00000511812 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
SMN2-210ENST00000511812 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
SMN2-210ENST00000511812 DDX17Q92841 729 aaKnown RBP24.33■■□□□ 1.49
SMN2-210ENST00000511812 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
SMN2-210ENST00000511812 NHSL1Q5SYE7 1610 aa24.32■■□□□ 1.48
SMN2-210ENST00000511812 L3MBTL2Q969R5 705 aa24.29■■□□□ 1.48
SMN2-210ENST00000511812 MEX3CQ5U5Q3 659 aaKnown RBP24.28■■□□□ 1.48
SMN2-210ENST00000511812 NPHP3Q7Z494 1330 aa24.28■■□□□ 1.48
SMN2-210ENST00000511812 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
SMN2-210ENST00000511812 NUTM2BA6NNL0 878 aaPredicted RBP24.25■■□□□ 1.47
SMN2-210ENST00000511812 NUTM2EB1AL46 878 aaPredicted RBP24.25■■□□□ 1.47
SMN2-210ENST00000511812 NUTM2AQ8IVF1 878 aaPredicted RBP24.25■■□□□ 1.47
SMN2-210ENST00000511812 SOS2Q07890 1332 aaPredicted RBP24.25■■□□□ 1.47
SMN2-210ENST00000511812 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
SMN2-210ENST00000511812 FOXO3O43524 673 aa24.24■■□□□ 1.47
SMN2-210ENST00000511812 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
SMN2-210ENST00000511812 MINK1Q8N4C8 1332 aaPredicted RBP24.24■■□□□ 1.47
SMN2-210ENST00000511812 KIAA1210Q9ULL0 1709 aa24.23■■□□□ 1.47
SMN2-210ENST00000511812 NBPF1Q3BBV0 1214 aa24.22■■□□□ 1.47
SMN2-210ENST00000511812 PNPLA6Q8IY17 1366 aa24.21■■□□□ 1.47
SMN2-210ENST00000511812 EIF3AQ14152 1382 aaKnown RBP24.2■■□□□ 1.46
SMN2-210ENST00000511812 PHF8Q9UPP1 1060 aa24.2■■□□□ 1.46
SMN2-210ENST00000511812 XPCQ01831 940 aaPredicted RBP24.19■■□□□ 1.46
SMN2-210ENST00000511812 RGS17Q9UGC6 210 aaPredicted RBP24.19■■□□□ 1.46
SMN2-210ENST00000511812 LRP6O75581 1613 aa24.19■■□□□ 1.46
SMN2-210ENST00000511812 ADGRB2O60241 1585 aa24.18■■□□□ 1.46
SMN2-210ENST00000511812 WASLO00401 505 aaPredicted RBP24.18■■□□□ 1.46
SMN2-210ENST00000511812 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
SMN2-210ENST00000511812 ARHGEF28Q8N1W1 1705 aaKnown RBP24.16■■□□□ 1.46
SMN2-210ENST00000511812 KIF1AQ12756 1690 aa24.16■■□□□ 1.46
SMN2-210ENST00000511812 SOCS7O14512 581 aa24.16■■□□□ 1.46
SMN2-210ENST00000511812 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
SMN2-210ENST00000511812 PXDNQ92626 1479 aa24.14■■□□□ 1.46
SMN2-210ENST00000511812 PSME1Q06323 249 aa24.14■■□□□ 1.45
SMN2-210ENST00000511812 KRT28Q7Z3Y7 464 aa24.14■■□□□ 1.45
SMN2-210ENST00000511812 ZNF772Q68DY9 489 aaPredicted RBP24.12■■□□□ 1.45
SMN2-210ENST00000511812 PMFBP1Q8TBY8 1022 aa24.12■■□□□ 1.45
SMN2-210ENST00000511812 POTEAQ6S8J7 498 aa24.11■■□□□ 1.45
SMN2-210ENST00000511812 ROCK2O75116 1388 aaKnown RBP24.11■■□□□ 1.45
SMN2-210ENST00000511812 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
SMN2-210ENST00000511812 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
SMN2-210ENST00000511812 TULP4Q9NRJ4 1543 aa24.1■■□□□ 1.45
SMN2-210ENST00000511812 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
SMN2-210ENST00000511812 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
SMN2-210ENST00000511812 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
SMN2-210ENST00000511812 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.45
SMN2-210ENST00000511812 PRR36Q9H6K5 1346 aa24.08■■□□□ 1.44
SMN2-210ENST00000511812 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
SMN2-210ENST00000511812 TRPM1Q7Z4N2 1603 aa24.06■■□□□ 1.44
SMN2-210ENST00000511812 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
SMN2-210ENST00000511812 NGDNQ8NEJ9 315 aaKnown RBP24.06■■□□□ 1.44
SMN2-210ENST00000511812 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
SMN2-210ENST00000511812 AFF2P51816 1311 aa24.06■■□□□ 1.44
SMN2-210ENST00000511812 GPRASP1Q5JY77 1395 aa24.05■■□□□ 1.44
SMN2-210ENST00000511812 NBPF8Q3BBV2 869 aa24.05■■□□□ 1.44
SMN2-210ENST00000511812 LMOD2Q6P5Q4 547 aa24.05■■□□□ 1.44
SMN2-210ENST00000511812 NGLY1Q96IV0 654 aa24.05■■□□□ 1.44
SMN2-210ENST00000511812 COL22A1Q8NFW1 1626 aaPredicted RBP24.03■■□□□ 1.44
SMN2-210ENST00000511812 SBNO1A3KN83 1393 aa24.03■■□□□ 1.44
SMN2-210ENST00000511812 TNS3Q68CZ2 1445 aa24.02■■□□□ 1.44
SMN2-210ENST00000511812 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
SMN2-210ENST00000511812 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
SMN2-210ENST00000511812 ATP7BP35670 1465 aa24■■□□□ 1.43
SMN2-210ENST00000511812 CCDC61Q9Y6R9 512 aa24■■□□□ 1.43
SMN2-210ENST00000511812 ARHGEF10O15013 1369 aa24■■□□□ 1.43
SMN2-210ENST00000511812 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
SMN2-210ENST00000511812 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
SMN2-210ENST00000511812 PLEKHG5O94827 1062 aa23.97■■□□□ 1.43
SMN2-210ENST00000511812 QRICH2Q9H0J4 1663 aa23.96■■□□□ 1.43
SMN2-210ENST00000511812 EVC2Q86UK5 1308 aa23.96■■□□□ 1.43
SMN2-210ENST00000511812 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
SMN2-210ENST00000511812 RXRBP28702 533 aa23.96■■□□□ 1.43
SMN2-210ENST00000511812 CABP2Q9NPB3 220 aa23.96■■□□□ 1.43
SMN2-210ENST00000511812 QTRT2Q9H974 415 aaKnown RBP23.95■■□□□ 1.42
SMN2-210ENST00000511812 USP21Q9UK80 565 aa23.95■■□□□ 1.42
SMN2-210ENST00000511812 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
SMN2-210ENST00000511812 RALGAPBQ86X10 1494 aa23.93■■□□□ 1.42
SMN2-210ENST00000511812 ACEP12821 1306 aa23.92■■□□□ 1.42
SMN2-210ENST00000511812 CLSPNQ9HAW4 1339 aa23.92■■□□□ 1.42
SMN2-210ENST00000511812 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
SMN2-210ENST00000511812 CABLES1Q8TDN4 633 aa23.92■■□□□ 1.42
SMN2-210ENST00000511812 PPIP5K1Q6PFW1 1433 aa23.9■■□□□ 1.42
SMN2-210ENST00000511812 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
SMN2-210ENST00000511812 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
SMN2-210ENST00000511812 TRPC5Q9UL62 973 aaPredicted RBP23.89■■□□□ 1.41
SMN2-210ENST00000511812 TRPM3Q9HCF6 1732 aaPredicted RBP23.88■■□□□ 1.41
SMN2-210ENST00000511812 TOPAZ1Q8N9V7 1692 aa23.88■■□□□ 1.41
SMN2-210ENST00000511812 CABP1Q9NZU7 370 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms