RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 WAPLQ7Z5K2 1190 aa27.16■■□□□ 1.94
LSM6-206ENST00000510331 LRP6O75581 1613 aa27.16■■□□□ 1.94
LSM6-206ENST00000510331 DCAF11Q8TEB1 546 aa27.14■■□□□ 1.94
LSM6-206ENST00000510331 DLC1Q96QB1 1528 aa27.13■■□□□ 1.93
LSM6-206ENST00000510331 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
LSM6-206ENST00000510331 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
LSM6-206ENST00000510331 ORAI2Q96SN7 254 aa27.08■■□□□ 1.93
LSM6-206ENST00000510331 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
LSM6-206ENST00000510331 ADGRB2O60241 1585 aa27.06■■□□□ 1.92
LSM6-206ENST00000510331 RGS17Q9UGC6 210 aaPredicted RBP27.06■■□□□ 1.92
LSM6-206ENST00000510331 SPATA31A6Q5VVP1 1343 aa27.05■■□□□ 1.92
LSM6-206ENST00000510331 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
LSM6-206ENST00000510331 RGPD8O14715 1765 aaPredicted RBP27.04■■□□□ 1.92
LSM6-206ENST00000510331 KIF1AQ12756 1690 aa27.03■■□□□ 1.92
LSM6-206ENST00000510331 PRAM1Q96QH2 718 aa27.03■■□□□ 1.92
LSM6-206ENST00000510331 PNPLA6Q8IY17 1366 aa27.02■■□□□ 1.92
LSM6-206ENST00000510331 NUTM2FA1L443 756 aa27.02■■□□□ 1.92
LSM6-206ENST00000510331 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
LSM6-206ENST00000510331 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
LSM6-206ENST00000510331 PXDNQ92626 1479 aa27■■□□□ 1.91
LSM6-206ENST00000510331 SOCS7O14512 581 aa27■■□□□ 1.91
LSM6-206ENST00000510331 STAC3Q96MF2 364 aa27■■□□□ 1.91
LSM6-206ENST00000510331 USP32Q8NFA0 1604 aa27■■□□□ 1.91
LSM6-206ENST00000510331 ESCO1Q5FWF5 840 aa26.98■■□□□ 1.91
LSM6-206ENST00000510331 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
LSM6-206ENST00000510331 SOS2Q07890 1332 aaPredicted RBP26.97■■□□□ 1.91
LSM6-206ENST00000510331 COL22A1Q8NFW1 1626 aaPredicted RBP26.97■■□□□ 1.91
LSM6-206ENST00000510331 LRRC59Q96AG4 307 aaKnown RBP26.96■■□□□ 1.91
LSM6-206ENST00000510331 POGKQ9P215 609 aa26.95■■□□□ 1.9
LSM6-206ENST00000510331 NUTM2BA6NNL0 878 aaPredicted RBP26.94■■□□□ 1.9
LSM6-206ENST00000510331 NUTM2EB1AL46 878 aaPredicted RBP26.94■■□□□ 1.9
LSM6-206ENST00000510331 MEX3CQ5U5Q3 659 aaKnown RBP26.94■■□□□ 1.9
LSM6-206ENST00000510331 NUTM2AQ8IVF1 878 aaPredicted RBP26.94■■□□□ 1.9
LSM6-206ENST00000510331 NPHP3Q7Z494 1330 aa26.92■■□□□ 1.9
LSM6-206ENST00000510331 POTEAQ6S8J7 498 aa26.92■■□□□ 1.9
LSM6-206ENST00000510331 XPCQ01831 940 aaPredicted RBP26.91■■□□□ 1.9
LSM6-206ENST00000510331 SIN3AQ96ST3 1273 aa26.91■■□□□ 1.9
LSM6-206ENST00000510331 MINK1Q8N4C8 1332 aaPredicted RBP26.9■■□□□ 1.9
LSM6-206ENST00000510331 FOXO3O43524 673 aa26.89■■□□□ 1.9
LSM6-206ENST00000510331 HIRIP3Q9BW71 556 aaPredicted RBP26.89■■□□□ 1.9
LSM6-206ENST00000510331 TULP4Q9NRJ4 1543 aa26.89■■□□□ 1.89
LSM6-206ENST00000510331 ANKARQ7Z5J8 1434 aa26.89■■□□□ 1.89
LSM6-206ENST00000510331 TRPM1Q7Z4N2 1603 aa26.88■■□□□ 1.89
LSM6-206ENST00000510331 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
LSM6-206ENST00000510331 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
LSM6-206ENST00000510331 NBPF1Q3BBV0 1214 aa26.84■■□□□ 1.89
LSM6-206ENST00000510331 ITSN1Q15811 1721 aa26.83■■□□□ 1.89
LSM6-206ENST00000510331 NEUROD1Q13562 356 aa26.83■■□□□ 1.89
LSM6-206ENST00000510331 MARF1Q9Y4F3 1742 aaKnown RBP26.82■■□□□ 1.88
LSM6-206ENST00000510331 PHF8Q9UPP1 1060 aa26.82■■□□□ 1.88
LSM6-206ENST00000510331 QRICH2Q9H0J4 1663 aa26.82■■□□□ 1.88
LSM6-206ENST00000510331 PRR36Q9H6K5 1346 aa26.81■■□□□ 1.88
LSM6-206ENST00000510331 EIF3AQ14152 1382 aaKnown RBP26.81■■□□□ 1.88
LSM6-206ENST00000510331 ATP7BP35670 1465 aa26.81■■□□□ 1.88
LSM6-206ENST00000510331 TOPAZ1Q8N9V7 1692 aa26.8■■□□□ 1.88
LSM6-206ENST00000510331 ABCA3Q99758 1704 aa26.8■■□□□ 1.88
LSM6-206ENST00000510331 TRPM3Q9HCF6 1732 aaPredicted RBP26.8■■□□□ 1.88
LSM6-206ENST00000510331 AFF2P51816 1311 aa26.79■■□□□ 1.88
LSM6-206ENST00000510331 ADAMTS2O95450 1211 aa26.78■■□□□ 1.88
LSM6-206ENST00000510331 C8orf37Q96NL8 207 aa26.78■■□□□ 1.88
LSM6-206ENST00000510331 TNS3Q68CZ2 1445 aa26.78■■□□□ 1.88
LSM6-206ENST00000510331 WASLO00401 505 aaPredicted RBP26.77■■□□□ 1.88
LSM6-206ENST00000510331 ZNF772Q68DY9 489 aaPredicted RBP26.77■■□□□ 1.88
LSM6-206ENST00000510331 SPATA31A3Q5VYP0 1347 aa26.75■■□□□ 1.87
LSM6-206ENST00000510331 KRT28Q7Z3Y7 464 aa26.74■■□□□ 1.87
LSM6-206ENST00000510331 PMFBP1Q8TBY8 1022 aa26.74■■□□□ 1.87
LSM6-206ENST00000510331 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
LSM6-206ENST00000510331 SBNO1A3KN83 1393 aa26.71■■□□□ 1.87
LSM6-206ENST00000510331 ROCK2O75116 1388 aaKnown RBP26.69■■□□□ 1.86
LSM6-206ENST00000510331 CENPJQ9HC77 1338 aaPredicted RBP26.68■■□□□ 1.86
LSM6-206ENST00000510331 CRYBG1Q9Y4K1 1723 aa26.66■■□□□ 1.86
LSM6-206ENST00000510331 PSME1Q06323 249 aa26.66■■□□□ 1.86
LSM6-206ENST00000510331 NGLY1Q96IV0 654 aa26.66■■□□□ 1.86
LSM6-206ENST00000510331 TONSLQ96HA7 1378 aa26.66■■□□□ 1.86
LSM6-206ENST00000510331 CDK19Q9BWU1 502 aa26.65■■□□□ 1.86
LSM6-206ENST00000510331 ARHGEF10O15013 1369 aa26.65■■□□□ 1.86
LSM6-206ENST00000510331 PLCH1Q4KWH8 1693 aa26.64■■□□□ 1.86
LSM6-206ENST00000510331 NBPF8Q3BBV2 869 aa26.64■■□□□ 1.86
LSM6-206ENST00000510331 NUDT16Q96DE0 195 aaKnown RBP26.64■■□□□ 1.86
LSM6-206ENST00000510331 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.64■■□□□ 1.85
LSM6-206ENST00000510331 GPRASP1Q5JY77 1395 aa26.63■■□□□ 1.85
LSM6-206ENST00000510331 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
LSM6-206ENST00000510331 CDK12Q9NYV4 1490 aaPredicted RBP26.62■■□□□ 1.85
LSM6-206ENST00000510331 RGS12O14924 1447 aa26.62■■□□□ 1.85
LSM6-206ENST00000510331 PLEKHG5O94827 1062 aa26.61■■□□□ 1.85
LSM6-206ENST00000510331 LMOD2Q6P5Q4 547 aa26.61■■□□□ 1.85
LSM6-206ENST00000510331 RXRBP28702 533 aa26.6■■□□□ 1.85
LSM6-206ENST00000510331 CABLES1Q8TDN4 633 aa26.6■■□□□ 1.85
LSM6-206ENST00000510331 ATRNO75882 1429 aa26.59■■□□□ 1.85
LSM6-206ENST00000510331 NGDNQ8NEJ9 315 aaKnown RBP26.59■■□□□ 1.85
LSM6-206ENST00000510331 USP21Q9UK80 565 aa26.59■■□□□ 1.85
LSM6-206ENST00000510331 BCL9LQ86UU0 1499 aa26.59■■□□□ 1.85
LSM6-206ENST00000510331 FNBP4Q8N3X1 1017 aaPredicted RBP26.58■■□□□ 1.85
LSM6-206ENST00000510331 POLR3AO14802 1390 aaPredicted RBP26.58■■□□□ 1.84
LSM6-206ENST00000510331 SLIT2O94813 1529 aa26.57■■□□□ 1.84
LSM6-206ENST00000510331 QTRT2Q9H974 415 aaKnown RBP26.57■■□□□ 1.84
LSM6-206ENST00000510331 PHRF1Q9P1Y6 1649 aaKnown RBP26.57■■□□□ 1.84
LSM6-206ENST00000510331 PPIP5K1Q6PFW1 1433 aa26.56■■□□□ 1.84
LSM6-206ENST00000510331 HAP1P54257 671 aaPredicted RBP26.55■■□□□ 1.84
LSM6-206ENST00000510331 SRPK2P78362 688 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms