RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 KNDC1Q76NI1 1749 aa34.46■■■■□ 3.11
ATP2C1-217ENST00000509662 LRRC59Q96AG4 307 aaKnown RBP34.43■■■■□ 3.1
ATP2C1-217ENST00000509662 SPATA31A6Q5VVP1 1343 aa34.43■■■■□ 3.1
ATP2C1-217ENST00000509662 SOCS7O14512 581 aa34.41■■■■□ 3.1
ATP2C1-217ENST00000509662 ORAI2Q96SN7 254 aa34.41■■■■□ 3.1
ATP2C1-217ENST00000509662 CDC42BPGQ6DT37 1551 aa34.4■■■■□ 3.1
ATP2C1-217ENST00000509662 NHSL1Q5SYE7 1610 aa34.4■■■■□ 3.1
ATP2C1-217ENST00000509662 PLEKHH1Q9ULM0 1364 aa34.39■■■■□ 3.1
ATP2C1-217ENST00000509662 ESCO1Q5FWF5 840 aa34.37■■■■□ 3.09
ATP2C1-217ENST00000509662 DDX17Q92841 729 aaKnown RBP34.37■■■■□ 3.09
ATP2C1-217ENST00000509662 POGKQ9P215 609 aa34.36■■■■□ 3.09
ATP2C1-217ENST00000509662 PRAM1Q96QH2 718 aa34.35■■■■□ 3.09
ATP2C1-217ENST00000509662 SHPRHQ149N8 1683 aa34.35■■■■□ 3.09
ATP2C1-217ENST00000509662 SIN3AQ96ST3 1273 aa34.34■■■■□ 3.09
ATP2C1-217ENST00000509662 RGS17Q9UGC6 210 aaPredicted RBP34.33■■■■□ 3.09
ATP2C1-217ENST00000509662 MEX3CQ5U5Q3 659 aaKnown RBP34.32■■■■□ 3.08
ATP2C1-217ENST00000509662 NUTM2FA1L443 756 aa34.31■■■■□ 3.08
ATP2C1-217ENST00000509662 TRAK1Q9UPV9 953 aa34.31■■■■□ 3.08
ATP2C1-217ENST00000509662 SAFB2Q14151 953 aaKnown RBP eCLIP34.3■■■■□ 3.08
ATP2C1-217ENST00000509662 DLC1Q96QB1 1528 aa34.3■■■■□ 3.08
ATP2C1-217ENST00000509662 ADGRB1O14514 1584 aa34.29■■■■□ 3.08
ATP2C1-217ENST00000509662 SOS2Q07890 1332 aaPredicted RBP34.28■■■■□ 3.08
ATP2C1-217ENST00000509662 NUTM2BA6NNL0 878 aaPredicted RBP34.27■■■■□ 3.08
ATP2C1-217ENST00000509662 NUTM2EB1AL46 878 aaPredicted RBP34.27■■■■□ 3.08
ATP2C1-217ENST00000509662 NUTM2AQ8IVF1 878 aaPredicted RBP34.27■■■■□ 3.08
ATP2C1-217ENST00000509662 NPHP3Q7Z494 1330 aa34.27■■■■□ 3.08
ATP2C1-217ENST00000509662 NEUROD1Q13562 356 aa34.23■■■■□ 3.07
ATP2C1-217ENST00000509662 LRP6O75581 1613 aa34.22■■■■□ 3.07
ATP2C1-217ENST00000509662 FMN2Q9NZ56 1722 aa34.22■■■■□ 3.07
ATP2C1-217ENST00000509662 FOXO3O43524 673 aa34.22■■■■□ 3.07
ATP2C1-217ENST00000509662 PNPLA6Q8IY17 1366 aa34.21■■■■□ 3.07
ATP2C1-217ENST00000509662 POTEAQ6S8J7 498 aa34.19■■■■□ 3.06
ATP2C1-217ENST00000509662 L3MBTL2Q969R5 705 aa34.18■■■■□ 3.06
ATP2C1-217ENST00000509662 ZNF772Q68DY9 489 aaPredicted RBP34.16■■■■□ 3.06
ATP2C1-217ENST00000509662 MINK1Q8N4C8 1332 aaPredicted RBP34.14■■■■□ 3.06
ATP2C1-217ENST00000509662 KIAA1210Q9ULL0 1709 aa34.13■■■■□ 3.05
ATP2C1-217ENST00000509662 HIRIP3Q9BW71 556 aaPredicted RBP34.13■■■■□ 3.05
ATP2C1-217ENST00000509662 PHF8Q9UPP1 1060 aa34.13■■■■□ 3.05
ATP2C1-217ENST00000509662 XPCQ01831 940 aaPredicted RBP34.12■■■■□ 3.05
ATP2C1-217ENST00000509662 KIF1AQ12756 1690 aa34.11■■■■□ 3.05
ATP2C1-217ENST00000509662 EIF3AQ14152 1382 aaKnown RBP34.11■■■■□ 3.05
ATP2C1-217ENST00000509662 PXDNQ92626 1479 aa34.1■■■■□ 3.05
ATP2C1-217ENST00000509662 ANKARQ7Z5J8 1434 aa34.09■■■■□ 3.05
ATP2C1-217ENST00000509662 ADGRB2O60241 1585 aa34.09■■■■□ 3.05
ATP2C1-217ENST00000509662 WASLO00401 505 aaPredicted RBP34.08■■■■□ 3.05
ATP2C1-217ENST00000509662 KRT28Q7Z3Y7 464 aa34.08■■■■□ 3.05
ATP2C1-217ENST00000509662 PSME1Q06323 249 aa34.07■■■■□ 3.04
ATP2C1-217ENST00000509662 NBPF1Q3BBV0 1214 aa34.07■■■■□ 3.04
ATP2C1-217ENST00000509662 CLSPNQ9HAW4 1339 aa34.06■■■■□ 3.04
ATP2C1-217ENST00000509662 RGPD8O14715 1765 aaPredicted RBP34.06■■■■□ 3.04
ATP2C1-217ENST00000509662 C8orf37Q96NL8 207 aa34.05■■■■□ 3.04
ATP2C1-217ENST00000509662 TONSLQ96HA7 1378 aa34.05■■■■□ 3.04
ATP2C1-217ENST00000509662 ADAMTS2O95450 1211 aa34.04■■■■□ 3.04
ATP2C1-217ENST00000509662 ARHGEF28Q8N1W1 1705 aaKnown RBP34.04■■■■□ 3.04
ATP2C1-217ENST00000509662 AFF2P51816 1311 aa34.03■■■■□ 3.04
ATP2C1-217ENST00000509662 NGLY1Q96IV0 654 aa34.02■■■■□ 3.04
ATP2C1-217ENST00000509662 PMFBP1Q8TBY8 1022 aa34■■■■□ 3.03
ATP2C1-217ENST00000509662 COL22A1Q8NFW1 1626 aaPredicted RBP34■■■■□ 3.03
ATP2C1-217ENST00000509662 SPATA31A3Q5VYP0 1347 aa34■■■■□ 3.03
ATP2C1-217ENST00000509662 TULP4Q9NRJ4 1543 aa33.97■■■■□ 3.03
ATP2C1-217ENST00000509662 TRPM1Q7Z4N2 1603 aa33.96■■■■□ 3.03
ATP2C1-217ENST00000509662 USP32Q8NFA0 1604 aa33.96■■■■□ 3.03
ATP2C1-217ENST00000509662 PRR36Q9H6K5 1346 aa33.95■■■■□ 3.03
ATP2C1-217ENST00000509662 RXRBP28702 533 aa33.94■■■■□ 3.02
ATP2C1-217ENST00000509662 CDK19Q9BWU1 502 aa33.94■■■■□ 3.02
ATP2C1-217ENST00000509662 SBNO1A3KN83 1393 aa33.93■■■■□ 3.02
ATP2C1-217ENST00000509662 CCER1Q8TC90 406 aaPredicted RBP33.92■■■■□ 3.02
ATP2C1-217ENST00000509662 NUDT16Q96DE0 195 aaKnown RBP33.92■■■■□ 3.02
ATP2C1-217ENST00000509662 GPRASP1Q5JY77 1395 aa33.92■■■■□ 3.02
ATP2C1-217ENST00000509662 CENPJQ9HC77 1338 aaPredicted RBP33.91■■■■□ 3.02
ATP2C1-217ENST00000509662 NGDNQ8NEJ9 315 aaKnown RBP33.91■■■■□ 3.02
ATP2C1-217ENST00000509662 QTRT2Q9H974 415 aaKnown RBP33.91■■■■□ 3.02
ATP2C1-217ENST00000509662 NBPF8Q3BBV2 869 aa33.9■■■■□ 3.02
ATP2C1-217ENST00000509662 LMOD2Q6P5Q4 547 aa33.9■■■■□ 3.02
ATP2C1-217ENST00000509662 TNS3Q68CZ2 1445 aa33.89■■■■□ 3.02
ATP2C1-217ENST00000509662 HAP1P54257 671 aaPredicted RBP33.87■■■■□ 3.01
ATP2C1-217ENST00000509662 USP21Q9UK80 565 aa33.87■■■■□ 3.01
ATP2C1-217ENST00000509662 ARHGEF10O15013 1369 aa33.86■■■■□ 3.01
ATP2C1-217ENST00000509662 FNBP4Q8N3X1 1017 aaPredicted RBP33.86■■■■□ 3.01
ATP2C1-217ENST00000509662 ROCK2O75116 1388 aaKnown RBP33.85■■■■□ 3.01
ATP2C1-217ENST00000509662 RALGAPBQ86X10 1494 aa33.83■■■■□ 3.01
ATP2C1-217ENST00000509662 RBM6P78332 1123 aaKnown RBP33.83■■■■□ 3.01
ATP2C1-217ENST00000509662 CCDC61Q9Y6R9 512 aa33.83■■■■□ 3.01
ATP2C1-217ENST00000509662 ATP7BP35670 1465 aa33.82■■■■□ 3
ATP2C1-217ENST00000509662 ITSN1Q15811 1721 aa33.82■■■■□ 3
ATP2C1-217ENST00000509662 SRPK2P78362 688 aaKnown RBP33.81■■■■□ 3
ATP2C1-217ENST00000509662 TRPC5Q9UL62 973 aaPredicted RBP33.8■■■■□ 3
ATP2C1-217ENST00000509662 TIMELESSQ9UNS1 1208 aa33.79■■■■□ 3
ATP2C1-217ENST00000509662 PLEKHG5O94827 1062 aa33.78■■■■□ 3
ATP2C1-217ENST00000509662 CABLES1Q8TDN4 633 aa33.78■■■■□ 3
ATP2C1-217ENST00000509662 MARF1Q9Y4F3 1742 aaKnown RBP33.78■■■■□ 3
ATP2C1-217ENST00000509662 CDK12Q9NYV4 1490 aaPredicted RBP33.77■■■■□ 3
ATP2C1-217ENST00000509662 PAK3O75914 559 aaPredicted RBP33.77■■■■□ 3
ATP2C1-217ENST00000509662 PLEKHG3A1L390 1219 aa33.75■■■□□ 2.99
ATP2C1-217ENST00000509662 QRICH2Q9H0J4 1663 aa33.74■■■□□ 2.99
ATP2C1-217ENST00000509662 ACEP12821 1306 aa33.73■■■□□ 2.99
ATP2C1-217ENST00000509662 TRPM3Q9HCF6 1732 aaPredicted RBP33.73■■■□□ 2.99
ATP2C1-217ENST00000509662 CABP2Q9NPB3 220 aa33.72■■■□□ 2.99
ATP2C1-217ENST00000509662 EVC2Q86UK5 1308 aa33.72■■■□□ 2.99
ATP2C1-217ENST00000509662 POLR3AO14802 1390 aaPredicted RBP33.7■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms