RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 NHSL1Q5SYE7 1610 aa22.89■■□□□ 1.25
COMMD8-202ENST00000509220 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
COMMD8-202ENST00000509220 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
COMMD8-202ENST00000509220 ADGRB1O14514 1584 aa22.84■■□□□ 1.25
COMMD8-202ENST00000509220 SHPRHQ149N8 1683 aa22.84■■□□□ 1.25
COMMD8-202ENST00000509220 DLC1Q96QB1 1528 aa22.84■■□□□ 1.25
COMMD8-202ENST00000509220 LRRC59Q96AG4 307 aaKnown RBP22.83■■□□□ 1.25
COMMD8-202ENST00000509220 ORAI2Q96SN7 254 aa22.82■■□□□ 1.24
COMMD8-202ENST00000509220 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
COMMD8-202ENST00000509220 SOCS7O14512 581 aa22.78■■□□□ 1.24
COMMD8-202ENST00000509220 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
COMMD8-202ENST00000509220 ESCO1Q5FWF5 840 aa22.78■■□□□ 1.24
COMMD8-202ENST00000509220 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
COMMD8-202ENST00000509220 RGS17Q9UGC6 210 aaPredicted RBP22.78■■□□□ 1.24
COMMD8-202ENST00000509220 SOS2Q07890 1332 aaPredicted RBP22.78■■□□□ 1.24
COMMD8-202ENST00000509220 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.24
COMMD8-202ENST00000509220 POGKQ9P215 609 aa22.77■■□□□ 1.24
COMMD8-202ENST00000509220 TRAK1Q9UPV9 953 aa22.76■■□□□ 1.23
COMMD8-202ENST00000509220 KIAA1210Q9ULL0 1709 aa22.75■■□□□ 1.23
COMMD8-202ENST00000509220 NPHP3Q7Z494 1330 aa22.75■■□□□ 1.23
COMMD8-202ENST00000509220 LRP6O75581 1613 aa22.74■■□□□ 1.23
COMMD8-202ENST00000509220 NUTM2FA1L443 756 aa22.72■■□□□ 1.23
COMMD8-202ENST00000509220 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.23
COMMD8-202ENST00000509220 PNPLA6Q8IY17 1366 aa22.72■■□□□ 1.23
COMMD8-202ENST00000509220 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
COMMD8-202ENST00000509220 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
COMMD8-202ENST00000509220 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
COMMD8-202ENST00000509220 FOXO3O43524 673 aa22.69■■□□□ 1.22
COMMD8-202ENST00000509220 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
COMMD8-202ENST00000509220 L3MBTL2Q969R5 705 aa22.68■■□□□ 1.22
COMMD8-202ENST00000509220 PXDNQ92626 1479 aa22.67■■□□□ 1.22
COMMD8-202ENST00000509220 NUTM2BA6NNL0 878 aaPredicted RBP22.67■■□□□ 1.22
COMMD8-202ENST00000509220 NUTM2EB1AL46 878 aaPredicted RBP22.67■■□□□ 1.22
COMMD8-202ENST00000509220 NUTM2AQ8IVF1 878 aaPredicted RBP22.67■■□□□ 1.22
COMMD8-202ENST00000509220 ARHGEF28Q8N1W1 1705 aaKnown RBP22.67■■□□□ 1.22
COMMD8-202ENST00000509220 ANKARQ7Z5J8 1434 aa22.66■■□□□ 1.22
COMMD8-202ENST00000509220 RGPD8O14715 1765 aaPredicted RBP22.66■■□□□ 1.22
COMMD8-202ENST00000509220 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
COMMD8-202ENST00000509220 EIF3AQ14152 1382 aaKnown RBP22.65■■□□□ 1.22
COMMD8-202ENST00000509220 MINK1Q8N4C8 1332 aaPredicted RBP22.64■■□□□ 1.22
COMMD8-202ENST00000509220 NEUROD1Q13562 356 aa22.64■■□□□ 1.21
COMMD8-202ENST00000509220 ZNF772Q68DY9 489 aaPredicted RBP22.64■■□□□ 1.21
COMMD8-202ENST00000509220 PHF8Q9UPP1 1060 aa22.64■■□□□ 1.21
COMMD8-202ENST00000509220 NBPF1Q3BBV0 1214 aa22.63■■□□□ 1.21
COMMD8-202ENST00000509220 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
COMMD8-202ENST00000509220 COL22A1Q8NFW1 1626 aaPredicted RBP22.63■■□□□ 1.21
COMMD8-202ENST00000509220 WASLO00401 505 aaPredicted RBP22.62■■□□□ 1.21
COMMD8-202ENST00000509220 USP32Q8NFA0 1604 aa22.61■■□□□ 1.21
COMMD8-202ENST00000509220 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
COMMD8-202ENST00000509220 TULP4Q9NRJ4 1543 aa22.6■■□□□ 1.21
COMMD8-202ENST00000509220 PSME1Q06323 249 aa22.59■■□□□ 1.21
COMMD8-202ENST00000509220 KRT28Q7Z3Y7 464 aa22.59■■□□□ 1.21
COMMD8-202ENST00000509220 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
COMMD8-202ENST00000509220 AFF2P51816 1311 aa22.56■■□□□ 1.2
COMMD8-202ENST00000509220 PRR36Q9H6K5 1346 aa22.56■■□□□ 1.2
COMMD8-202ENST00000509220 C8orf37Q96NL8 207 aa22.55■■□□□ 1.2
COMMD8-202ENST00000509220 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
COMMD8-202ENST00000509220 SBNO1A3KN83 1393 aa22.54■■□□□ 1.2
COMMD8-202ENST00000509220 ADAMTS2O95450 1211 aa22.54■■□□□ 1.2
COMMD8-202ENST00000509220 PMFBP1Q8TBY8 1022 aa22.54■■□□□ 1.2
COMMD8-202ENST00000509220 TNS3Q68CZ2 1445 aa22.52■■□□□ 1.2
COMMD8-202ENST00000509220 NGLY1Q96IV0 654 aa22.52■■□□□ 1.2
COMMD8-202ENST00000509220 CDK19Q9BWU1 502 aa22.52■■□□□ 1.2
COMMD8-202ENST00000509220 CENPJQ9HC77 1338 aaPredicted RBP22.52■■□□□ 1.2
COMMD8-202ENST00000509220 ITSN1Q15811 1721 aa22.51■■□□□ 1.19
COMMD8-202ENST00000509220 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
COMMD8-202ENST00000509220 ATP7BP35670 1465 aa22.51■■□□□ 1.19
COMMD8-202ENST00000509220 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
COMMD8-202ENST00000509220 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
COMMD8-202ENST00000509220 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
COMMD8-202ENST00000509220 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
COMMD8-202ENST00000509220 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
COMMD8-202ENST00000509220 RXRBP28702 533 aa22.48■■□□□ 1.19
COMMD8-202ENST00000509220 FNBP4Q8N3X1 1017 aaPredicted RBP22.48■■□□□ 1.19
COMMD8-202ENST00000509220 NGDNQ8NEJ9 315 aaKnown RBP22.47■■□□□ 1.19
COMMD8-202ENST00000509220 TRPM3Q9HCF6 1732 aaPredicted RBP22.46■■□□□ 1.19
COMMD8-202ENST00000509220 NBPF8Q3BBV2 869 aa22.46■■□□□ 1.19
COMMD8-202ENST00000509220 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
COMMD8-202ENST00000509220 CCDC61Q9Y6R9 512 aa22.46■■□□□ 1.19
COMMD8-202ENST00000509220 QRICH2Q9H0J4 1663 aa22.46■■□□□ 1.19
COMMD8-202ENST00000509220 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
COMMD8-202ENST00000509220 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
COMMD8-202ENST00000509220 USP21Q9UK80 565 aa22.44■■□□□ 1.18
COMMD8-202ENST00000509220 LMOD2Q6P5Q4 547 aa22.43■■□□□ 1.18
COMMD8-202ENST00000509220 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
COMMD8-202ENST00000509220 RBM6P78332 1123 aaKnown RBP22.42■■□□□ 1.18
COMMD8-202ENST00000509220 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
COMMD8-202ENST00000509220 POLR3AO14802 1390 aaPredicted RBP22.41■■□□□ 1.18
COMMD8-202ENST00000509220 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
COMMD8-202ENST00000509220 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
COMMD8-202ENST00000509220 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
COMMD8-202ENST00000509220 ACEP12821 1306 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 ABCA3Q99758 1704 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 BCL9LQ86UU0 1499 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
COMMD8-202ENST00000509220 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
COMMD8-202ENST00000509220 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
COMMD8-202ENST00000509220 ATRNO75882 1429 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms