RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
UBE3D-207ENST00000509102 LRRC59Q96AG4 307 aaKnown RBP27.14■■□□□ 1.94
UBE3D-207ENST00000509102 SIRT1Q96EB6 747 aa27.14■■□□□ 1.94
UBE3D-207ENST00000509102 NHSL1Q5SYE7 1610 aa27.14■■□□□ 1.94
UBE3D-207ENST00000509102 SHPRHQ149N8 1683 aa27.11■■□□□ 1.93
UBE3D-207ENST00000509102 MEX3CQ5U5Q3 659 aaKnown RBP27.11■■□□□ 1.93
UBE3D-207ENST00000509102 ORAI2Q96SN7 254 aa27.09■■□□□ 1.93
UBE3D-207ENST00000509102 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
UBE3D-207ENST00000509102 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.93
UBE3D-207ENST00000509102 POGKQ9P215 609 aa27.07■■□□□ 1.92
UBE3D-207ENST00000509102 DDX17Q92841 729 aaKnown RBP27.06■■□□□ 1.92
UBE3D-207ENST00000509102 PRAM1Q96QH2 718 aa27.05■■□□□ 1.92
UBE3D-207ENST00000509102 NPHP3Q7Z494 1330 aa27.04■■□□□ 1.92
UBE3D-207ENST00000509102 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
UBE3D-207ENST00000509102 RGS17Q9UGC6 210 aaPredicted RBP27.03■■□□□ 1.92
UBE3D-207ENST00000509102 NUTM2FA1L443 756 aa27.02■■□□□ 1.92
UBE3D-207ENST00000509102 NUTM2BA6NNL0 878 aaPredicted RBP27.02■■□□□ 1.92
UBE3D-207ENST00000509102 NUTM2EB1AL46 878 aaPredicted RBP27.02■■□□□ 1.92
UBE3D-207ENST00000509102 NUTM2AQ8IVF1 878 aaPredicted RBP27.02■■□□□ 1.92
UBE3D-207ENST00000509102 ADGRB1O14514 1584 aa27.01■■□□□ 1.92
UBE3D-207ENST00000509102 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
UBE3D-207ENST00000509102 TRAK1Q9UPV9 953 aa27.01■■□□□ 1.91
UBE3D-207ENST00000509102 SOS2Q07890 1332 aaPredicted RBP27■■□□□ 1.91
UBE3D-207ENST00000509102 LRP6O75581 1613 aa27■■□□□ 1.91
UBE3D-207ENST00000509102 PNPLA6Q8IY17 1366 aa26.98■■□□□ 1.91
UBE3D-207ENST00000509102 FMN2Q9NZ56 1722 aa26.98■■□□□ 1.91
UBE3D-207ENST00000509102 ZNF772Q68DY9 489 aaPredicted RBP26.96■■□□□ 1.91
UBE3D-207ENST00000509102 FOXO3O43524 673 aa26.95■■□□□ 1.9
UBE3D-207ENST00000509102 POTEAQ6S8J7 498 aa26.93■■□□□ 1.9
UBE3D-207ENST00000509102 EIF3AQ14152 1382 aaKnown RBP26.93■■□□□ 1.9
UBE3D-207ENST00000509102 KIF1AQ12756 1690 aa26.92■■□□□ 1.9
UBE3D-207ENST00000509102 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
UBE3D-207ENST00000509102 ADGRB2O60241 1585 aa26.89■■□□□ 1.9
UBE3D-207ENST00000509102 PHF8Q9UPP1 1060 aa26.89■■□□□ 1.9
UBE3D-207ENST00000509102 KIAA1210Q9ULL0 1709 aa26.89■■□□□ 1.9
UBE3D-207ENST00000509102 MINK1Q8N4C8 1332 aaPredicted RBP26.89■■□□□ 1.89
UBE3D-207ENST00000509102 PXDNQ92626 1479 aa26.88■■□□□ 1.89
UBE3D-207ENST00000509102 XPCQ01831 940 aaPredicted RBP26.88■■□□□ 1.89
UBE3D-207ENST00000509102 ANKARQ7Z5J8 1434 aa26.88■■□□□ 1.89
UBE3D-207ENST00000509102 HIRIP3Q9BW71 556 aaPredicted RBP26.87■■□□□ 1.89
UBE3D-207ENST00000509102 PSME1Q06323 249 aa26.86■■□□□ 1.89
UBE3D-207ENST00000509102 C8orf37Q96NL8 207 aa26.86■■□□□ 1.89
UBE3D-207ENST00000509102 ADAMTS2O95450 1211 aa26.85■■□□□ 1.89
UBE3D-207ENST00000509102 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
UBE3D-207ENST00000509102 AFF2P51816 1311 aa26.85■■□□□ 1.89
UBE3D-207ENST00000509102 WASLO00401 505 aaPredicted RBP26.83■■□□□ 1.89
UBE3D-207ENST00000509102 KRT28Q7Z3Y7 464 aa26.83■■□□□ 1.89
UBE3D-207ENST00000509102 L3MBTL2Q969R5 705 aa26.83■■□□□ 1.89
UBE3D-207ENST00000509102 SIN3AQ96ST3 1273 aa26.83■■□□□ 1.89
UBE3D-207ENST00000509102 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
UBE3D-207ENST00000509102 NGLY1Q96IV0 654 aa26.82■■□□□ 1.88
UBE3D-207ENST00000509102 COL22A1Q8NFW1 1626 aaPredicted RBP26.82■■□□□ 1.88
UBE3D-207ENST00000509102 RGPD8O14715 1765 aaPredicted RBP26.8■■□□□ 1.88
UBE3D-207ENST00000509102 TULP4Q9NRJ4 1543 aa26.8■■□□□ 1.88
UBE3D-207ENST00000509102 SPATA31A3Q5VYP0 1347 aa26.79■■□□□ 1.88
UBE3D-207ENST00000509102 RXRBP28702 533 aa26.78■■□□□ 1.88
UBE3D-207ENST00000509102 NBPF1Q3BBV0 1214 aa26.78■■□□□ 1.88
UBE3D-207ENST00000509102 PMFBP1Q8TBY8 1022 aa26.77■■□□□ 1.88
UBE3D-207ENST00000509102 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
UBE3D-207ENST00000509102 GPRASP1Q5JY77 1395 aa26.75■■□□□ 1.87
UBE3D-207ENST00000509102 TNS3Q68CZ2 1445 aa26.74■■□□□ 1.87
UBE3D-207ENST00000509102 HAP1P54257 671 aaPredicted RBP26.74■■□□□ 1.87
UBE3D-207ENST00000509102 LMOD2Q6P5Q4 547 aa26.74■■□□□ 1.87
UBE3D-207ENST00000509102 SBNO1A3KN83 1393 aa26.73■■□□□ 1.87
UBE3D-207ENST00000509102 ARHGEF10O15013 1369 aa26.72■■□□□ 1.87
UBE3D-207ENST00000509102 NGDNQ8NEJ9 315 aaKnown RBP26.72■■□□□ 1.87
UBE3D-207ENST00000509102 QTRT2Q9H974 415 aaKnown RBP26.72■■□□□ 1.87
UBE3D-207ENST00000509102 PRR36Q9H6K5 1346 aa26.71■■□□□ 1.87
UBE3D-207ENST00000509102 CENPJQ9HC77 1338 aaPredicted RBP26.71■■□□□ 1.87
UBE3D-207ENST00000509102 USP21Q9UK80 565 aa26.71■■□□□ 1.87
UBE3D-207ENST00000509102 CDK19Q9BWU1 502 aa26.7■■□□□ 1.86
UBE3D-207ENST00000509102 ITSN1Q15811 1721 aa26.69■■□□□ 1.86
UBE3D-207ENST00000509102 NUDT16Q96DE0 195 aaKnown RBP26.69■■□□□ 1.86
UBE3D-207ENST00000509102 RBM6P78332 1123 aaKnown RBP26.68■■□□□ 1.86
UBE3D-207ENST00000509102 FNBP4Q8N3X1 1017 aaPredicted RBP26.68■■□□□ 1.86
UBE3D-207ENST00000509102 ROCK2O75116 1388 aaKnown RBP26.68■■□□□ 1.86
UBE3D-207ENST00000509102 TONSLQ96HA7 1378 aa26.68■■□□□ 1.86
UBE3D-207ENST00000509102 TRPC5Q9UL62 973 aaPredicted RBP26.66■■□□□ 1.86
UBE3D-207ENST00000509102 ATP7BP35670 1465 aa26.66■■□□□ 1.86
UBE3D-207ENST00000509102 CDK12Q9NYV4 1490 aaPredicted RBP26.66■■□□□ 1.86
UBE3D-207ENST00000509102 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
UBE3D-207ENST00000509102 SRPK2P78362 688 aaKnown RBP26.64■■□□□ 1.86
UBE3D-207ENST00000509102 CCDC61Q9Y6R9 512 aa26.64■■□□□ 1.86
UBE3D-207ENST00000509102 MARF1Q9Y4F3 1742 aaKnown RBP26.64■■□□□ 1.85
UBE3D-207ENST00000509102 PLEKHG5O94827 1062 aa26.63■■□□□ 1.85
UBE3D-207ENST00000509102 PAK3O75914 559 aaPredicted RBP26.62■■□□□ 1.85
UBE3D-207ENST00000509102 QRICH2Q9H0J4 1663 aa26.6■■□□□ 1.85
UBE3D-207ENST00000509102 CABLES1Q8TDN4 633 aa26.59■■□□□ 1.85
UBE3D-207ENST00000509102 TRPM3Q9HCF6 1732 aaPredicted RBP26.58■■□□□ 1.85
UBE3D-207ENST00000509102 EVC2Q86UK5 1308 aa26.56■■□□□ 1.84
UBE3D-207ENST00000509102 ATRNO75882 1429 aa26.56■■□□□ 1.84
UBE3D-207ENST00000509102 PLEKHG3A1L390 1219 aa26.55■■□□□ 1.84
UBE3D-207ENST00000509102 ACEP12821 1306 aa26.55■■□□□ 1.84
UBE3D-207ENST00000509102 BCL9LQ86UU0 1499 aa26.55■■□□□ 1.84
UBE3D-207ENST00000509102 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
UBE3D-207ENST00000509102 NBPF8Q3BBV2 869 aa26.54■■□□□ 1.84
UBE3D-207ENST00000509102 UNC5CLQ8IV45 518 aa26.54■■□□□ 1.84
UBE3D-207ENST00000509102 CABP2Q9NPB3 220 aa26.54■■□□□ 1.84
UBE3D-207ENST00000509102 POLR3AO14802 1390 aaPredicted RBP26.54■■□□□ 1.84
UBE3D-207ENST00000509102 ALS2Q96Q42 1657 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms