RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 LRP6O75581 1613 aa21.71■■□□□ 1.07
UBE2D3-228ENST00000508974 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
UBE2D3-228ENST00000508974 TECPR2O15040 1411 aa21.71■■□□□ 1.07
UBE2D3-228ENST00000508974 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
UBE2D3-228ENST00000508974 ORAI2Q96SN7 254 aa21.69■■□□□ 1.06
UBE2D3-228ENST00000508974 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
UBE2D3-228ENST00000508974 C14orf93Q9H972 538 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-228ENST00000508974 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
UBE2D3-228ENST00000508974 NUTM2FA1L443 756 aa21.67■■□□□ 1.06
UBE2D3-228ENST00000508974 NUTM2BA6NNL0 878 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-228ENST00000508974 NUTM2EB1AL46 878 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-228ENST00000508974 NUTM2AQ8IVF1 878 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-228ENST00000508974 SPATA31A6Q5VVP1 1343 aa21.66■■□□□ 1.06
UBE2D3-228ENST00000508974 MEX3CQ5U5Q3 659 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-228ENST00000508974 DHX57Q6P158 1386 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-228ENST00000508974 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
UBE2D3-228ENST00000508974 SAFB2Q14151 953 aaKnown RBP eCLIP21.63■■□□□ 1.05
UBE2D3-228ENST00000508974 POTEAQ6S8J7 498 aa21.63■■□□□ 1.05
UBE2D3-228ENST00000508974 RGPD8O14715 1765 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-228ENST00000508974 ESCO1Q5FWF5 840 aa21.62■■□□□ 1.05
UBE2D3-228ENST00000508974 LRRC59Q96AG4 307 aaKnown RBP21.62■■□□□ 1.05
UBE2D3-228ENST00000508974 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
UBE2D3-228ENST00000508974 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
UBE2D3-228ENST00000508974 PNPLA6Q8IY17 1366 aa21.59■■□□□ 1.05
UBE2D3-228ENST00000508974 XPCQ01831 940 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-228ENST00000508974 POGKQ9P215 609 aa21.57■■□□□ 1.04
UBE2D3-228ENST00000508974 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
UBE2D3-228ENST00000508974 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
UBE2D3-228ENST00000508974 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
UBE2D3-228ENST00000508974 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
UBE2D3-228ENST00000508974 KIF1AQ12756 1690 aa21.54■■□□□ 1.04
UBE2D3-228ENST00000508974 FOXO3O43524 673 aa21.54■■□□□ 1.04
UBE2D3-228ENST00000508974 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
UBE2D3-228ENST00000508974 PXDNQ92626 1479 aa21.53■■□□□ 1.04
UBE2D3-228ENST00000508974 ARHGEF28Q8N1W1 1705 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-228ENST00000508974 NPHP3Q7Z494 1330 aa21.53■■□□□ 1.04
UBE2D3-228ENST00000508974 HIRIP3Q9BW71 556 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-228ENST00000508974 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
UBE2D3-228ENST00000508974 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
UBE2D3-228ENST00000508974 USP32Q8NFA0 1604 aa21.5■■□□□ 1.03
UBE2D3-228ENST00000508974 COL22A1Q8NFW1 1626 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-228ENST00000508974 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-228ENST00000508974 ADGRB2O60241 1585 aa21.49■■□□□ 1.03
UBE2D3-228ENST00000508974 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
UBE2D3-228ENST00000508974 AFF2P51816 1311 aa21.49■■□□□ 1.03
UBE2D3-228ENST00000508974 ZNF772Q68DY9 489 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-228ENST00000508974 KIAA1210Q9ULL0 1709 aa21.48■■□□□ 1.03
UBE2D3-228ENST00000508974 SIN3AQ96ST3 1273 aa21.45■■□□□ 1.02
UBE2D3-228ENST00000508974 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
UBE2D3-228ENST00000508974 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
UBE2D3-228ENST00000508974 MARF1Q9Y4F3 1742 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-228ENST00000508974 KRT28Q7Z3Y7 464 aa21.43■■□□□ 1.02
UBE2D3-228ENST00000508974 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
UBE2D3-228ENST00000508974 PMFBP1Q8TBY8 1022 aa21.42■■□□□ 1.02
UBE2D3-228ENST00000508974 NGLY1Q96IV0 654 aa21.42■■□□□ 1.02
UBE2D3-228ENST00000508974 NBPF1Q3BBV0 1214 aa21.41■■□□□ 1.02
UBE2D3-228ENST00000508974 TULP4Q9NRJ4 1543 aa21.4■■□□□ 1.02
UBE2D3-228ENST00000508974 ANKARQ7Z5J8 1434 aa21.4■■□□□ 1.02
UBE2D3-228ENST00000508974 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
UBE2D3-228ENST00000508974 SPATA31A3Q5VYP0 1347 aa21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 WASLO00401 505 aaPredicted RBP21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 RXRBP28702 533 aa21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 LMOD2Q6P5Q4 547 aa21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
UBE2D3-228ENST00000508974 PSME1Q06323 249 aa21.37■■□□□ 1.01
UBE2D3-228ENST00000508974 TNS3Q68CZ2 1445 aa21.37■■□□□ 1.01
UBE2D3-228ENST00000508974 EIF3AQ14152 1382 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-228ENST00000508974 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-228ENST00000508974 ABCA3Q99758 1704 aa21.35■■□□□ 1.01
UBE2D3-228ENST00000508974 TRPM1Q7Z4N2 1603 aa21.35■■□□□ 1.01
UBE2D3-228ENST00000508974 TRPM3Q9HCF6 1732 aaPredicted RBP21.35■■□□□ 1.01
UBE2D3-228ENST00000508974 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
UBE2D3-228ENST00000508974 USP21Q9UK80 565 aa21.34■■□□□ 1.01
UBE2D3-228ENST00000508974 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
UBE2D3-228ENST00000508974 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
UBE2D3-228ENST00000508974 ATP7BP35670 1465 aa21.32■■□□□ 1
UBE2D3-228ENST00000508974 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
UBE2D3-228ENST00000508974 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
UBE2D3-228ENST00000508974 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
UBE2D3-228ENST00000508974 CDK19Q9BWU1 502 aa21.3■■□□□ 1
UBE2D3-228ENST00000508974 SBNO1A3KN83 1393 aa21.3■■□□□ 1
UBE2D3-228ENST00000508974 ALS2Q96Q42 1657 aa21.3■■□□□ 1
UBE2D3-228ENST00000508974 RGS12O14924 1447 aa21.29■■□□□ 1
UBE2D3-228ENST00000508974 GPRASP1Q5JY77 1395 aa21.29■■□□□ 1
UBE2D3-228ENST00000508974 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
UBE2D3-228ENST00000508974 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
UBE2D3-228ENST00000508974 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
UBE2D3-228ENST00000508974 FNBP4Q8N3X1 1017 aaPredicted RBP21.28■■□□□ 1
UBE2D3-228ENST00000508974 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
UBE2D3-228ENST00000508974 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
UBE2D3-228ENST00000508974 ARHGEF10O15013 1369 aa21.27■■□□□ 1
UBE2D3-228ENST00000508974 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-228ENST00000508974 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-228ENST00000508974 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-228ENST00000508974 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
UBE2D3-228ENST00000508974 ATRNO75882 1429 aa21.25■□□□□ 0.99
UBE2D3-228ENST00000508974 ROCK2O75116 1388 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-228ENST00000508974 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
UBE2D3-228ENST00000508974 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms