RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 VGFO15240 615 aaPredicted RBP15.91■□□□□ 0.14
SNCA-210ENST00000506691 ZNF326Q5BKZ1 582 aaKnown RBP15.91■□□□□ 0.14
SNCA-210ENST00000506691 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
SNCA-210ENST00000506691 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
SNCA-210ENST00000506691 CDC42BPGQ6DT37 1551 aa15.88■□□□□ 0.13
SNCA-210ENST00000506691 ATRNO75882 1429 aa15.88■□□□□ 0.13
SNCA-210ENST00000506691 MYOM2P54296 1465 aa15.87■□□□□ 0.13
SNCA-210ENST00000506691 USP21Q9UK80 565 aa15.86■□□□□ 0.13
SNCA-210ENST00000506691 NPHP3Q7Z494 1330 aa15.86■□□□□ 0.13
SNCA-210ENST00000506691 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.85■□□□□ 0.13
SNCA-210ENST00000506691 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
SNCA-210ENST00000506691 ROBO2Q9HCK4 1378 aa15.85■□□□□ 0.13
SNCA-210ENST00000506691 MARF1Q9Y4F3 1742 aaKnown RBP15.85■□□□□ 0.13
SNCA-210ENST00000506691 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
SNCA-210ENST00000506691 TECPR2O15040 1411 aa15.83■□□□□ 0.12
SNCA-210ENST00000506691 PXDNQ92626 1479 aa15.83■□□□□ 0.12
SNCA-210ENST00000506691 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
SNCA-210ENST00000506691 PPLO60437 1756 aa15.82■□□□□ 0.12
SNCA-210ENST00000506691 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
SNCA-210ENST00000506691 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
SNCA-210ENST00000506691 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
SNCA-210ENST00000506691 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
SNCA-210ENST00000506691 SRCAPQ6ZRS2 3230 aa15.79■□□□□ 0.12
SNCA-210ENST00000506691 CLSPNQ9HAW4 1339 aa15.78■□□□□ 0.12
SNCA-210ENST00000506691 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.12
SNCA-210ENST00000506691 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
SNCA-210ENST00000506691 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.12
SNCA-210ENST00000506691 EP400Q96L91 3159 aa15.77■□□□□ 0.12
SNCA-210ENST00000506691 KNDC1Q76NI1 1749 aa15.77■□□□□ 0.11
SNCA-210ENST00000506691 KIF1AQ12756 1690 aa15.76■□□□□ 0.11
SNCA-210ENST00000506691 SLIT2O94813 1529 aa15.76■□□□□ 0.11
SNCA-210ENST00000506691 BLMP54132 1417 aaPredicted RBP15.76■□□□□ 0.11
SNCA-210ENST00000506691 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
SNCA-210ENST00000506691 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
SNCA-210ENST00000506691 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
SNCA-210ENST00000506691 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
SNCA-210ENST00000506691 UNC5CLQ8IV45 518 aa15.72■□□□□ 0.11
SNCA-210ENST00000506691 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.11
SNCA-210ENST00000506691 NWD2Q9ULI1 1742 aa15.71■□□□□ 0.11
SNCA-210ENST00000506691 USP32Q8NFA0 1604 aa15.71■□□□□ 0.11
SNCA-210ENST00000506691 IFT172Q9UG01 1749 aa15.71■□□□□ 0.1
SNCA-210ENST00000506691 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.1
SNCA-210ENST00000506691 SPATA31A3Q5VYP0 1347 aa15.7■□□□□ 0.1
SNCA-210ENST00000506691 LRP5O75197 1615 aa15.7■□□□□ 0.1
SNCA-210ENST00000506691 ONECUT3O60422 494 aaPredicted RBP15.7■□□□□ 0.1
SNCA-210ENST00000506691 GLI3P10071 1580 aa15.7■□□□□ 0.1
SNCA-210ENST00000506691 FOXO3O43524 673 aa15.69■□□□□ 0.1
SNCA-210ENST00000506691 SPATA31E1Q6ZUB1 1445 aa15.68■□□□□ 0.1
SNCA-210ENST00000506691 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
SNCA-210ENST00000506691 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
SNCA-210ENST00000506691 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
SNCA-210ENST00000506691 VPS72Q15906 364 aa15.66■□□□□ 0.1
SNCA-210ENST00000506691 PSME1Q06323 249 aa15.65■□□□□ 0.1
SNCA-210ENST00000506691 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
SNCA-210ENST00000506691 TNS3Q68CZ2 1445 aa15.65■□□□□ 0.1
SNCA-210ENST00000506691 ARHGEF10O15013 1369 aa15.64■□□□□ 0.09
SNCA-210ENST00000506691 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
SNCA-210ENST00000506691 SF3B2Q13435 895 aaKnown RBP15.63■□□□□ 0.09
SNCA-210ENST00000506691 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
SNCA-210ENST00000506691 NRXN1Q9ULB1 1477 aa15.63■□□□□ 0.09
SNCA-210ENST00000506691 BRWD3Q6RI45 1802 aa15.63■□□□□ 0.09
SNCA-210ENST00000506691 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
SNCA-210ENST00000506691 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
SNCA-210ENST00000506691 PLCH1Q4KWH8 1693 aa15.61■□□□□ 0.09
SNCA-210ENST00000506691 KRT28Q7Z3Y7 464 aa15.61■□□□□ 0.09
SNCA-210ENST00000506691 ABCA3Q99758 1704 aa15.6■□□□□ 0.09
SNCA-210ENST00000506691 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
SNCA-210ENST00000506691 NEUROD1Q13562 356 aa15.6■□□□□ 0.09
SNCA-210ENST00000506691 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
SNCA-210ENST00000506691 SIN3AQ96ST3 1273 aa15.6■□□□□ 0.09
SNCA-210ENST00000506691 ADGRB2O60241 1585 aa15.59■□□□□ 0.09
SNCA-210ENST00000506691 SEPT12Q8IYM1 358 aa15.59■□□□□ 0.09
SNCA-210ENST00000506691 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
SNCA-210ENST00000506691 C14orf93Q9H972 538 aaKnown RBP15.58■□□□□ 0.08
SNCA-210ENST00000506691 PHF8Q9UPP1 1060 aa15.58■□□□□ 0.08
SNCA-210ENST00000506691 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
SNCA-210ENST00000506691 DISP2A7MBM2 1401 aa15.58■□□□□ 0.08
SNCA-210ENST00000506691 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
SNCA-210ENST00000506691 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
SNCA-210ENST00000506691 BAG6P46379 1132 aa15.56■□□□□ 0.08
SNCA-210ENST00000506691 DCAF11Q8TEB1 546 aa15.56■□□□□ 0.08
SNCA-210ENST00000506691 NRAPQ86VF7 1730 aa15.55■□□□□ 0.08
SNCA-210ENST00000506691 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
SNCA-210ENST00000506691 HAP1P54257 671 aaPredicted RBP15.55■□□□□ 0.08
SNCA-210ENST00000506691 STK26Q9P289 416 aa15.55■□□□□ 0.08
SNCA-210ENST00000506691 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
SNCA-210ENST00000506691 COL14A1Q05707 1796 aaKnown RBP15.54■□□□□ 0.08
SNCA-210ENST00000506691 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
SNCA-210ENST00000506691 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
SNCA-210ENST00000506691 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
SNCA-210ENST00000506691 DEFB132Q7Z7B7 95 aa15.53■□□□□ 0.08
SNCA-210ENST00000506691 TRPM3Q9HCF6 1732 aaPredicted RBP15.53■□□□□ 0.08
SNCA-210ENST00000506691 ALS2Q96Q42 1657 aa15.52■□□□□ 0.08
SNCA-210ENST00000506691 NUTM2FA1L443 756 aa15.52■□□□□ 0.08
SNCA-210ENST00000506691 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
SNCA-210ENST00000506691 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
SNCA-210ENST00000506691 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
SNCA-210ENST00000506691 THSD7AQ9UPZ6 1657 aa15.5■□□□□ 0.07
SNCA-210ENST00000506691 GPRASP1Q5JY77 1395 aa15.49■□□□□ 0.07
SNCA-210ENST00000506691 ADGRB1O14514 1584 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms