RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
LIN54-204ENST00000505397 NPC1L1Q9UHC9 1359 aa22.34■■□□□ 1.17
LIN54-204ENST00000505397 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
LIN54-204ENST00000505397 ASXL1Q8IXJ9 1541 aa22.34■■□□□ 1.17
LIN54-204ENST00000505397 TNRQ92752 1358 aa22.33■■□□□ 1.17
LIN54-204ENST00000505397 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.17
LIN54-204ENST00000505397 MS4A1P11836 297 aa22.32■■□□□ 1.16
LIN54-204ENST00000505397 BCL11AQ9H165 835 aa22.32■■□□□ 1.16
LIN54-204ENST00000505397 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
LIN54-204ENST00000505397 ZNF521Q96K83 1311 aa22.31■■□□□ 1.16
LIN54-204ENST00000505397 PLIN1O60240 522 aa22.29■■□□□ 1.16
LIN54-204ENST00000505397 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
LIN54-204ENST00000505397 STK26Q9P289 416 aa22.29■■□□□ 1.16
LIN54-204ENST00000505397 FER1L4A9Z1Z3 1794 aa22.28■■□□□ 1.16
LIN54-204ENST00000505397 YTHDC2Q9H6S0 1430 aaKnown RBP22.28■■□□□ 1.16
LIN54-204ENST00000505397 PDE4AP27815 886 aa22.27■■□□□ 1.16
LIN54-204ENST00000505397 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
LIN54-204ENST00000505397 CRBNQ96SW2 442 aa22.27■■□□□ 1.16
LIN54-204ENST00000505397 BACH2Q9BYV9 841 aa22.27■■□□□ 1.16
LIN54-204ENST00000505397 EVC2Q86UK5 1308 aa22.26■■□□□ 1.15
LIN54-204ENST00000505397 DUSP27Q5VZP5 1158 aa22.26■■□□□ 1.15
LIN54-204ENST00000505397 ZBTB47Q9UFB7 747 aaPredicted RBP22.25■■□□□ 1.15
LIN54-204ENST00000505397 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
LIN54-204ENST00000505397 UBR1Q8IWV7 1749 aa22.24■■□□□ 1.15
LIN54-204ENST00000505397 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
LIN54-204ENST00000505397 PTPRMP28827 1452 aa22.23■■□□□ 1.15
LIN54-204ENST00000505397 TULP4Q9NRJ4 1543 aa22.23■■□□□ 1.15
LIN54-204ENST00000505397 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
LIN54-204ENST00000505397 C3P01024 1663 aa22.22■■□□□ 1.15
LIN54-204ENST00000505397 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
LIN54-204ENST00000505397 POGKQ9P215 609 aa22.22■■□□□ 1.15
LIN54-204ENST00000505397 NLRP1Q9C000 1473 aa22.21■■□□□ 1.15
LIN54-204ENST00000505397 PUS7Q96PZ0 661 aaKnown RBP22.21■■□□□ 1.15
LIN54-204ENST00000505397 C20orf194Q5TEA3 1177 aa22.2■■□□□ 1.14
LIN54-204ENST00000505397 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
LIN54-204ENST00000505397 TRMT2AQ8IZ69 625 aaKnown RBP22.19■■□□□ 1.14
LIN54-204ENST00000505397 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
LIN54-204ENST00000505397 KDM2BQ8NHM5 1336 aa22.19■■□□□ 1.14
LIN54-204ENST00000505397 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
LIN54-204ENST00000505397 TMEM2Q9UHN6 1383 aa22.17■■□□□ 1.14
LIN54-204ENST00000505397 CEBPAP49715 358 aaPredicted RBP22.17■■□□□ 1.14
LIN54-204ENST00000505397 SLFN5Q08AF3 891 aa22.17■■□□□ 1.14
LIN54-204ENST00000505397 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
LIN54-204ENST00000505397 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
LIN54-204ENST00000505397 SLC12A5Q9H2X9 1139 aa22.16■■□□□ 1.14
LIN54-204ENST00000505397 CARD14Q9BXL6 1004 aa22.15■■□□□ 1.14
LIN54-204ENST00000505397 NSD3Q9BZ95 1437 aa22.15■■□□□ 1.14
LIN54-204ENST00000505397 MINK1Q8N4C8 1332 aaPredicted RBP22.15■■□□□ 1.14
LIN54-204ENST00000505397 SRPK2P78362 688 aaKnown RBP22.15■■□□□ 1.14
LIN54-204ENST00000505397 NBR1Q14596 966 aa22.15■■□□□ 1.14
LIN54-204ENST00000505397 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
LIN54-204ENST00000505397 CABP2Q9NPB3 220 aa22.14■■□□□ 1.13
LIN54-204ENST00000505397 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
LIN54-204ENST00000505397 NINLQ9Y2I6 1382 aa22.12■■□□□ 1.13
LIN54-204ENST00000505397 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
LIN54-204ENST00000505397 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
LIN54-204ENST00000505397 ANKRD36BQ8N2N9 1353 aa22.11■■□□□ 1.13
LIN54-204ENST00000505397 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
LIN54-204ENST00000505397 CENPQQ7L2Z9 268 aaPredicted RBP22.1■■□□□ 1.13
LIN54-204ENST00000505397 NPM2Q86SE8 214 aaKnown RBP22.1■■□□□ 1.13
LIN54-204ENST00000505397 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
LIN54-204ENST00000505397 KNDC1Q76NI1 1749 aa22.09■■□□□ 1.13
LIN54-204ENST00000505397 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
LIN54-204ENST00000505397 NGEFQ8N5V2 710 aa22.08■■□□□ 1.13
LIN54-204ENST00000505397 SKAP1Q86WV1 359 aa22.08■■□□□ 1.12
LIN54-204ENST00000505397 METP08581 1390 aa22.07■■□□□ 1.12
LIN54-204ENST00000505397 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
LIN54-204ENST00000505397 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
LIN54-204ENST00000505397 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
LIN54-204ENST00000505397 APAF1O14727 1248 aa22.06■■□□□ 1.12
LIN54-204ENST00000505397 EID1Q9Y6B2 187 aa22.06■■□□□ 1.12
LIN54-204ENST00000505397 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
LIN54-204ENST00000505397 PLEKHG1Q9ULL1 1385 aa22.05■■□□□ 1.12
LIN54-204ENST00000505397 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
LIN54-204ENST00000505397 RIMS1Q86UR5 1692 aaKnown RBP22.05■■□□□ 1.12
LIN54-204ENST00000505397 E9PSI1 815 aa22.04■■□□□ 1.12
LIN54-204ENST00000505397 MORC1Q86VD1 984 aa22.04■■□□□ 1.12
LIN54-204ENST00000505397 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
LIN54-204ENST00000505397 TXNDC2Q86VQ3 553 aa22.03■■□□□ 1.12
LIN54-204ENST00000505397 SLIT1O75093 1534 aa22.03■■□□□ 1.12
LIN54-204ENST00000505397 CPS1P31327 1500 aa22.02■■□□□ 1.12
LIN54-204ENST00000505397 NSD2O96028 1365 aa22.02■■□□□ 1.12
LIN54-204ENST00000505397 TECPR2O15040 1411 aa22.02■■□□□ 1.12
LIN54-204ENST00000505397 TERF2IPQ9NYB0 399 aa22.02■■□□□ 1.12
LIN54-204ENST00000505397 A0A1W2PP64 1363 aa22.02■■□□□ 1.12
LIN54-204ENST00000505397 ADAMTS13Q76LX8 1427 aa22.01■■□□□ 1.11
LIN54-204ENST00000505397 LTKP29376 864 aa22.01■■□□□ 1.11
LIN54-204ENST00000505397 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
LIN54-204ENST00000505397 THEMISQ8N1K5 641 aaPredicted RBP22■■□□□ 1.11
LIN54-204ENST00000505397 ARHGAP23Q9P227 1491 aa22■■□□□ 1.11
LIN54-204ENST00000505397 RTL5Q5HYW3 569 aaPredicted RBP22■■□□□ 1.11
LIN54-204ENST00000505397 SHPRHQ149N8 1683 aa22■■□□□ 1.11
LIN54-204ENST00000505397 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
LIN54-204ENST00000505397 SIRT1Q96EB6 747 aa21.98■■□□□ 1.11
LIN54-204ENST00000505397 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
LIN54-204ENST00000505397 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
LIN54-204ENST00000505397 CEP170BQ9Y4F5 1589 aaPredicted RBP21.96■■□□□ 1.11
LIN54-204ENST00000505397 BCAR3O75815 825 aa21.96■■□□□ 1.11
LIN54-204ENST00000505397 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
LIN54-204ENST00000505397 USP35Q9P2H5 1018 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms