RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 SPAG9O60271 1321 aaKnown RBP10.03□□□□□ -0.8
MED28-202ENST00000499786 ATP7AQ04656 1500 aa10.02□□□□□ -0.8
MED28-202ENST00000499786 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.8
MED28-202ENST00000499786 PTGER2P43116 358 aa10.02□□□□□ -0.81
MED28-202ENST00000499786 MPHOSPH9Q99550 1183 aa10.02□□□□□ -0.81
MED28-202ENST00000499786 ZNF518AQ6AHZ1 1483 aa10.02□□□□□ -0.81
MED28-202ENST00000499786 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 EVI5O60447 810 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 PZPP20742 1482 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 NEO1Q92859 1461 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 GLI2P10070 1586 aa10.01□□□□□ -0.81
MED28-202ENST00000499786 SCAPERQ9BY12 1400 aa10□□□□□ -0.81
MED28-202ENST00000499786 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
MED28-202ENST00000499786 ARSIQ5FYB1 569 aa10□□□□□ -0.81
MED28-202ENST00000499786 NUP155O75694 1391 aa10□□□□□ -0.81
MED28-202ENST00000499786 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
MED28-202ENST00000499786 KHSRPQ92945 711 aaKnown RBP eCLIP9.99□□□□□ -0.81
MED28-202ENST00000499786 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
MED28-202ENST00000499786 IQGAP3Q86VI3 1631 aa9.99□□□□□ -0.81
MED28-202ENST00000499786 EIF2AK4Q9P2K8 1649 aaKnown RBP9.99□□□□□ -0.81
MED28-202ENST00000499786 POGZQ7Z3K3 1410 aa9.99□□□□□ -0.81
MED28-202ENST00000499786 FAM135AQ9P2D6 1515 aa9.98□□□□□ -0.81
MED28-202ENST00000499786 DIP2BQ9P265 1576 aa9.98□□□□□ -0.81
MED28-202ENST00000499786 HECW2Q9P2P5 1572 aa9.98□□□□□ -0.81
MED28-202ENST00000499786 RIMBP2O15034 1052 aa9.98□□□□□ -0.81
MED28-202ENST00000499786 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
MED28-202ENST00000499786 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
MED28-202ENST00000499786 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
MED28-202ENST00000499786 MAGI2Q86UL8 1455 aa9.97□□□□□ -0.81
MED28-202ENST00000499786 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
MED28-202ENST00000499786 KDM5CP41229 1560 aa9.97□□□□□ -0.81
MED28-202ENST00000499786 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
MED28-202ENST00000499786 KANK1Q14678 1352 aa9.96□□□□□ -0.82
MED28-202ENST00000499786 RPRD2Q5VT52 1461 aaKnown RBP9.96□□□□□ -0.82
MED28-202ENST00000499786 NUDT7P0C024 238 aa9.95□□□□□ -0.82
MED28-202ENST00000499786 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
MED28-202ENST00000499786 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
MED28-202ENST00000499786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
MED28-202ENST00000499786 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
MED28-202ENST00000499786 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
MED28-202ENST00000499786 ST18O60284 1047 aa9.93□□□□□ -0.82
MED28-202ENST00000499786 AFAP1Q8N556 730 aa9.93□□□□□ -0.82
MED28-202ENST00000499786 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
MED28-202ENST00000499786 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
MED28-202ENST00000499786 TET3O43151 1660 aa9.91□□□□□ -0.82
MED28-202ENST00000499786 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
MED28-202ENST00000499786 OSBPP22059 807 aa9.91□□□□□ -0.82
MED28-202ENST00000499786 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
MED28-202ENST00000499786 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
MED28-202ENST00000499786 A2MP01023 1474 aa9.91□□□□□ -0.82
MED28-202ENST00000499786 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
MED28-202ENST00000499786 RICTORQ6R327 1708 aa9.9□□□□□ -0.82
MED28-202ENST00000499786 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.82
MED28-202ENST00000499786 ABCA6Q8N139 1617 aa9.9□□□□□ -0.82
MED28-202ENST00000499786 RNF17Q9BXT8 1623 aaKnown RBP9.9□□□□□ -0.82
MED28-202ENST00000499786 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
MED28-202ENST00000499786 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
MED28-202ENST00000499786 PHF14O94880 888 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 FOSBP53539 338 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 DDX12PQ92771 950 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 LHX6Q9UPM6 363 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
MED28-202ENST00000499786 ZMYM4Q5VZL5 1548 aa9.88□□□□□ -0.83
MED28-202ENST00000499786 BCORL1Q5H9F3 1711 aa9.88□□□□□ -0.83
MED28-202ENST00000499786 DIP2CQ9Y2E4 1556 aa9.88□□□□□ -0.83
MED28-202ENST00000499786 KIF13AQ9H1H9 1805 aa9.87□□□□□ -0.83
MED28-202ENST00000499786 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
MED28-202ENST00000499786 SPHKAPQ2M3C7 1700 aa9.87□□□□□ -0.83
MED28-202ENST00000499786 PPRC1Q5VV67 1664 aaKnown RBP9.87□□□□□ -0.83
MED28-202ENST00000499786 KIF3BO15066 747 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 VWDEQ8N2E2 1590 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
MED28-202ENST00000499786 E9PCH4 1651 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 TRPM2O94759 1503 aa9.86□□□□□ -0.83
MED28-202ENST00000499786 RBM26Q5T8P6 1007 aaKnown RBP9.85□□□□□ -0.83
MED28-202ENST00000499786 L3MBTL2Q969R5 705 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 EPAS1Q99814 870 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 ZC3H13Q5T200 1668 aaKnown RBP9.85□□□□□ -0.83
MED28-202ENST00000499786 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 ATP10AO60312 1499 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 CEP152O94986 1710 aa9.85□□□□□ -0.83
MED28-202ENST00000499786 LMTK2Q8IWU2 1503 aa9.84□□□□□ -0.83
MED28-202ENST00000499786 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
MED28-202ENST00000499786 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
MED28-202ENST00000499786 TYW1BQ6NUM6 668 aa9.82□□□□□ -0.84
MED28-202ENST00000499786 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
MED28-202ENST00000499786 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
MED28-202ENST00000499786 REREQ9P2R6 1566 aa9.81□□□□□ -0.84
MED28-202ENST00000499786 TULP1O00294 542 aaPredicted RBP9.81□□□□□ -0.84
MED28-202ENST00000499786 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
MED28-202ENST00000499786 ZNF326Q5BKZ1 582 aaKnown RBP9.81□□□□□ -0.84
MED28-202ENST00000499786 FBXW7Q969H0 707 aa9.81□□□□□ -0.84
MED28-202ENST00000499786 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
MED28-202ENST00000499786 CAMSAP1Q5T5Y3 1602 aa9.81□□□□□ -0.84
MED28-202ENST00000499786 RALGAPBQ86X10 1494 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms