RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SIRT1Q96EB6 747 aa24.1■■□□□ 1.45
ABCF3-218ENST00000498136 PRAM1Q96QH2 718 aa24.1■■□□□ 1.45
ABCF3-218ENST00000498136 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
ABCF3-218ENST00000498136 MED1Q15648 1581 aaPredicted RBP24.1■■□□□ 1.45
ABCF3-218ENST00000498136 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
ABCF3-218ENST00000498136 L3MBTL2Q969R5 705 aa24.09■■□□□ 1.45
ABCF3-218ENST00000498136 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
ABCF3-218ENST00000498136 KIAA1210Q9ULL0 1709 aa24.08■■□□□ 1.45
ABCF3-218ENST00000498136 COL16A1Q07092 1604 aaPredicted RBP24.08■■□□□ 1.45
ABCF3-218ENST00000498136 NUTM2FA1L443 756 aa24.07■■□□□ 1.44
ABCF3-218ENST00000498136 PCGF6Q9BYE7 350 aa24.06■■□□□ 1.44
ABCF3-218ENST00000498136 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
ABCF3-218ENST00000498136 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
ABCF3-218ENST00000498136 FMN2Q9NZ56 1722 aa24.04■■□□□ 1.44
ABCF3-218ENST00000498136 JCADQ9P266 1359 aa24.03■■□□□ 1.44
ABCF3-218ENST00000498136 ARHGEF28Q8N1W1 1705 aaKnown RBP24.02■■□□□ 1.44
ABCF3-218ENST00000498136 ESCO1Q5FWF5 840 aa24.02■■□□□ 1.44
ABCF3-218ENST00000498136 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
ABCF3-218ENST00000498136 NBPF1Q3BBV0 1214 aa24■■□□□ 1.43
ABCF3-218ENST00000498136 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
ABCF3-218ENST00000498136 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
ABCF3-218ENST00000498136 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
ABCF3-218ENST00000498136 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
ABCF3-218ENST00000498136 RGPD8O14715 1765 aaPredicted RBP23.96■■□□□ 1.43
ABCF3-218ENST00000498136 SHPRHQ149N8 1683 aa23.96■■□□□ 1.43
ABCF3-218ENST00000498136 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.43
ABCF3-218ENST00000498136 ADGRB2O60241 1585 aa23.95■■□□□ 1.43
ABCF3-218ENST00000498136 LRRC59Q96AG4 307 aaKnown RBP23.95■■□□□ 1.42
ABCF3-218ENST00000498136 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
ABCF3-218ENST00000498136 NPHP3Q7Z494 1330 aa23.92■■□□□ 1.42
ABCF3-218ENST00000498136 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
ABCF3-218ENST00000498136 FOXO3O43524 673 aa23.91■■□□□ 1.42
ABCF3-218ENST00000498136 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
ABCF3-218ENST00000498136 EIF3AQ14152 1382 aaKnown RBP23.89■■□□□ 1.41
ABCF3-218ENST00000498136 SOS2Q07890 1332 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 NUTM2BA6NNL0 878 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 NUTM2EB1AL46 878 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 WASLO00401 505 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 MEX3CQ5U5Q3 659 aaKnown RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 NUTM2AQ8IVF1 878 aaPredicted RBP23.88■■□□□ 1.41
ABCF3-218ENST00000498136 USP32Q8NFA0 1604 aa23.88■■□□□ 1.41
ABCF3-218ENST00000498136 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
ABCF3-218ENST00000498136 NBPF8Q3BBV2 869 aa23.87■■□□□ 1.41
ABCF3-218ENST00000498136 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
ABCF3-218ENST00000498136 TULP4Q9NRJ4 1543 aa23.86■■□□□ 1.41
ABCF3-218ENST00000498136 PNPLA6Q8IY17 1366 aa23.86■■□□□ 1.41
ABCF3-218ENST00000498136 CENPJQ9HC77 1338 aaPredicted RBP23.85■■□□□ 1.41
ABCF3-218ENST00000498136 ILDR2Q71H61 639 aa23.85■■□□□ 1.41
ABCF3-218ENST00000498136 QRICH2Q9H0J4 1663 aa23.85■■□□□ 1.41
ABCF3-218ENST00000498136 LRP6O75581 1613 aa23.84■■□□□ 1.41
ABCF3-218ENST00000498136 PXDNQ92626 1479 aa23.84■■□□□ 1.41
ABCF3-218ENST00000498136 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
ABCF3-218ENST00000498136 ITSN1Q15811 1721 aa23.81■■□□□ 1.4
ABCF3-218ENST00000498136 KRT28Q7Z3Y7 464 aa23.81■■□□□ 1.4
ABCF3-218ENST00000498136 CDK19Q9BWU1 502 aa23.81■■□□□ 1.4
ABCF3-218ENST00000498136 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
ABCF3-218ENST00000498136 PSME1Q06323 249 aa23.79■■□□□ 1.4
ABCF3-218ENST00000498136 CARD11Q9BXL7 1154 aa23.78■■□□□ 1.4
ABCF3-218ENST00000498136 RALGAPBQ86X10 1494 aa23.77■■□□□ 1.4
ABCF3-218ENST00000498136 CCER1Q8TC90 406 aaPredicted RBP23.77■■□□□ 1.4
ABCF3-218ENST00000498136 NUDT16Q96DE0 195 aaKnown RBP23.77■■□□□ 1.4
ABCF3-218ENST00000498136 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
ABCF3-218ENST00000498136 ATP7BP35670 1465 aa23.76■■□□□ 1.39
ABCF3-218ENST00000498136 SRPK2P78362 688 aaKnown RBP23.76■■□□□ 1.39
ABCF3-218ENST00000498136 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
ABCF3-218ENST00000498136 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
ABCF3-218ENST00000498136 COL22A1Q8NFW1 1626 aaPredicted RBP23.75■■□□□ 1.39
ABCF3-218ENST00000498136 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
ABCF3-218ENST00000498136 LMOD2Q6P5Q4 547 aa23.74■■□□□ 1.39
ABCF3-218ENST00000498136 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
ABCF3-218ENST00000498136 ADAMTS2O95450 1211 aa23.73■■□□□ 1.39
ABCF3-218ENST00000498136 C8orf37Q96NL8 207 aa23.72■■□□□ 1.39
ABCF3-218ENST00000498136 TNS3Q68CZ2 1445 aa23.72■■□□□ 1.39
ABCF3-218ENST00000498136 TOPAZ1Q8N9V7 1692 aa23.71■■□□□ 1.39
ABCF3-218ENST00000498136 CABP2Q9NPB3 220 aa23.71■■□□□ 1.39
ABCF3-218ENST00000498136 EVC2Q86UK5 1308 aa23.7■■□□□ 1.38
ABCF3-218ENST00000498136 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
ABCF3-218ENST00000498136 SBNO1A3KN83 1393 aa23.69■■□□□ 1.38
ABCF3-218ENST00000498136 POTEAQ6S8J7 498 aa23.69■■□□□ 1.38
ABCF3-218ENST00000498136 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
ABCF3-218ENST00000498136 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
ABCF3-218ENST00000498136 ZNF772Q68DY9 489 aaPredicted RBP23.68■■□□□ 1.38
ABCF3-218ENST00000498136 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
ABCF3-218ENST00000498136 AFF2P51816 1311 aa23.67■■□□□ 1.38
ABCF3-218ENST00000498136 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
ABCF3-218ENST00000498136 ARHGEF10O15013 1369 aa23.66■■□□□ 1.38
ABCF3-218ENST00000498136 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
ABCF3-218ENST00000498136 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
ABCF3-218ENST00000498136 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
ABCF3-218ENST00000498136 MARF1Q9Y4F3 1742 aaKnown RBP23.65■■□□□ 1.38
ABCF3-218ENST00000498136 ACEP12821 1306 aa23.64■■□□□ 1.38
ABCF3-218ENST00000498136 ALS2Q96Q42 1657 aa23.63■■□□□ 1.37
ABCF3-218ENST00000498136 PLEKHG3A1L390 1219 aa23.62■■□□□ 1.37
ABCF3-218ENST00000498136 CABLES1Q8TDN4 633 aa23.61■■□□□ 1.37
ABCF3-218ENST00000498136 POLR3AO14802 1390 aaPredicted RBP23.61■■□□□ 1.37
ABCF3-218ENST00000498136 ABCA3Q99758 1704 aa23.6■■□□□ 1.37
ABCF3-218ENST00000498136 SOCS7O14512 581 aa23.59■■□□□ 1.37
ABCF3-218ENST00000498136 CABP1Q9NZU7 370 aa23.59■■□□□ 1.37
ABCF3-218ENST00000498136 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms