RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
NUP50-219ENST00000497960 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
NUP50-219ENST00000497960 LRRC59Q96AG4 307 aaKnown RBP22.26■■□□□ 1.15
NUP50-219ENST00000497960 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
NUP50-219ENST00000497960 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
NUP50-219ENST00000497960 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
NUP50-219ENST00000497960 SOCS7O14512 581 aa22.25■■□□□ 1.15
NUP50-219ENST00000497960 DDX17Q92841 729 aaKnown RBP22.25■■□□□ 1.15
NUP50-219ENST00000497960 ESCO1Q5FWF5 840 aa22.23■■□□□ 1.15
NUP50-219ENST00000497960 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
NUP50-219ENST00000497960 POGKQ9P215 609 aa22.23■■□□□ 1.15
NUP50-219ENST00000497960 NHSL1Q5SYE7 1610 aa22.22■■□□□ 1.15
NUP50-219ENST00000497960 MEX3CQ5U5Q3 659 aaKnown RBP22.22■■□□□ 1.15
NUP50-219ENST00000497960 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
NUP50-219ENST00000497960 RGS17Q9UGC6 210 aaPredicted RBP22.21■■□□□ 1.15
NUP50-219ENST00000497960 SAFB2Q14151 953 aaKnown RBP eCLIP22.2■■□□□ 1.14
NUP50-219ENST00000497960 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
NUP50-219ENST00000497960 ADGRB1O14514 1584 aa22.19■■□□□ 1.14
NUP50-219ENST00000497960 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
NUP50-219ENST00000497960 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
NUP50-219ENST00000497960 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
NUP50-219ENST00000497960 NUTM2BA6NNL0 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-219ENST00000497960 NUTM2EB1AL46 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-219ENST00000497960 NUTM2AQ8IVF1 878 aaPredicted RBP22.18■■□□□ 1.14
NUP50-219ENST00000497960 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
NUP50-219ENST00000497960 LRP6O75581 1613 aa22.15■■□□□ 1.14
NUP50-219ENST00000497960 PNPLA6Q8IY17 1366 aa22.14■■□□□ 1.14
NUP50-219ENST00000497960 FOXO3O43524 673 aa22.14■■□□□ 1.13
NUP50-219ENST00000497960 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
NUP50-219ENST00000497960 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
NUP50-219ENST00000497960 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
NUP50-219ENST00000497960 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
NUP50-219ENST00000497960 ZNF772Q68DY9 489 aaPredicted RBP22.1■■□□□ 1.13
NUP50-219ENST00000497960 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
NUP50-219ENST00000497960 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
NUP50-219ENST00000497960 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
NUP50-219ENST00000497960 PHF8Q9UPP1 1060 aa22.09■■□□□ 1.13
NUP50-219ENST00000497960 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
NUP50-219ENST00000497960 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
NUP50-219ENST00000497960 PXDNQ92626 1479 aa22.06■■□□□ 1.12
NUP50-219ENST00000497960 ANKARQ7Z5J8 1434 aa22.06■■□□□ 1.12
NUP50-219ENST00000497960 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 ADGRB2O60241 1585 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
NUP50-219ENST00000497960 ADAMTS2O95450 1211 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 NBPF1Q3BBV0 1214 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
NUP50-219ENST00000497960 PSME1Q06323 249 aa22.03■■□□□ 1.12
NUP50-219ENST00000497960 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
NUP50-219ENST00000497960 AFF2P51816 1311 aa22.03■■□□□ 1.12
NUP50-219ENST00000497960 PMFBP1Q8TBY8 1022 aa22■■□□□ 1.11
NUP50-219ENST00000497960 NGLY1Q96IV0 654 aa22■■□□□ 1.11
NUP50-219ENST00000497960 SPATA31A3Q5VYP0 1347 aa22■■□□□ 1.11
NUP50-219ENST00000497960 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
NUP50-219ENST00000497960 RGPD8O14715 1765 aaPredicted RBP21.99■■□□□ 1.11
NUP50-219ENST00000497960 TULP4Q9NRJ4 1543 aa21.97■■□□□ 1.11
NUP50-219ENST00000497960 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
NUP50-219ENST00000497960 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
NUP50-219ENST00000497960 RXRBP28702 533 aa21.96■■□□□ 1.11
NUP50-219ENST00000497960 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
NUP50-219ENST00000497960 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
NUP50-219ENST00000497960 SBNO1A3KN83 1393 aa21.95■■□□□ 1.1
NUP50-219ENST00000497960 LMOD2Q6P5Q4 547 aa21.94■■□□□ 1.1
NUP50-219ENST00000497960 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
NUP50-219ENST00000497960 NUDT16Q96DE0 195 aaKnown RBP21.94■■□□□ 1.1
NUP50-219ENST00000497960 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
NUP50-219ENST00000497960 GPRASP1Q5JY77 1395 aa21.94■■□□□ 1.1
NUP50-219ENST00000497960 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
NUP50-219ENST00000497960 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
NUP50-219ENST00000497960 QTRT2Q9H974 415 aaKnown RBP21.92■■□□□ 1.1
NUP50-219ENST00000497960 ARHGEF10O15013 1369 aa21.91■■□□□ 1.1
NUP50-219ENST00000497960 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
NUP50-219ENST00000497960 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
NUP50-219ENST00000497960 USP21Q9UK80 565 aa21.91■■□□□ 1.1
NUP50-219ENST00000497960 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
NUP50-219ENST00000497960 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
NUP50-219ENST00000497960 RBM6P78332 1123 aaKnown RBP21.88■■□□□ 1.09
NUP50-219ENST00000497960 ATP7BP35670 1465 aa21.88■■□□□ 1.09
NUP50-219ENST00000497960 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
NUP50-219ENST00000497960 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
NUP50-219ENST00000497960 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
NUP50-219ENST00000497960 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
NUP50-219ENST00000497960 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
NUP50-219ENST00000497960 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
NUP50-219ENST00000497960 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
NUP50-219ENST00000497960 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
NUP50-219ENST00000497960 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
NUP50-219ENST00000497960 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
NUP50-219ENST00000497960 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
NUP50-219ENST00000497960 ACEP12821 1306 aa21.81■■□□□ 1.08
NUP50-219ENST00000497960 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
NUP50-219ENST00000497960 MARF1Q9Y4F3 1742 aaKnown RBP21.8■■□□□ 1.08
NUP50-219ENST00000497960 QRICH2Q9H0J4 1663 aa21.8■■□□□ 1.08
NUP50-219ENST00000497960 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
NUP50-219ENST00000497960 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
NUP50-219ENST00000497960 TRPM3Q9HCF6 1732 aaPredicted RBP21.8■■□□□ 1.08
NUP50-219ENST00000497960 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
NUP50-219ENST00000497960 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
NUP50-219ENST00000497960 ATRNO75882 1429 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms