RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 DCAF11Q8TEB1 546 aa30.07■■■□□ 2.4
COL9A2-211ENST00000496215 DDX17Q92841 729 aaKnown RBP30.05■■■□□ 2.4
COL9A2-211ENST00000496215 STAC3Q96MF2 364 aa30.04■■■□□ 2.4
COL9A2-211ENST00000496215 RGS17Q9UGC6 210 aaPredicted RBP30.04■■■□□ 2.4
COL9A2-211ENST00000496215 TRIM26Q12899 539 aaPredicted RBP30.03■■■□□ 2.4
COL9A2-211ENST00000496215 KDM2AQ9Y2K7 1162 aa30.03■■■□□ 2.4
COL9A2-211ENST00000496215 LRP6O75581 1613 aa30.03■■■□□ 2.4
COL9A2-211ENST00000496215 PHF23Q9BUL5 403 aaPredicted RBP30.02■■■□□ 2.4
COL9A2-211ENST00000496215 DLC1Q96QB1 1528 aa30.01■■■□□ 2.39
COL9A2-211ENST00000496215 ORAI2Q96SN7 254 aa30■■■□□ 2.39
COL9A2-211ENST00000496215 FMN2Q9NZ56 1722 aa29.99■■■□□ 2.39
COL9A2-211ENST00000496215 KIAA1210Q9ULL0 1709 aa29.97■■■□□ 2.39
COL9A2-211ENST00000496215 SIRT1Q96EB6 747 aa29.95■■■□□ 2.39
COL9A2-211ENST00000496215 SPATA31A6Q5VVP1 1343 aa29.92■■■□□ 2.38
COL9A2-211ENST00000496215 ARHGEF28Q8N1W1 1705 aaKnown RBP29.91■■■□□ 2.38
COL9A2-211ENST00000496215 ADGRB2O60241 1585 aa29.9■■■□□ 2.38
COL9A2-211ENST00000496215 PRAM1Q96QH2 718 aa29.9■■■□□ 2.38
COL9A2-211ENST00000496215 NUTM2FA1L443 756 aa29.89■■■□□ 2.38
COL9A2-211ENST00000496215 RGPD8O14715 1765 aaPredicted RBP29.88■■■□□ 2.37
COL9A2-211ENST00000496215 PNPLA6Q8IY17 1366 aa29.88■■■□□ 2.37
COL9A2-211ENST00000496215 SAFB2Q14151 953 aaKnown RBP eCLIP29.87■■■□□ 2.37
COL9A2-211ENST00000496215 SOS2Q07890 1332 aaPredicted RBP29.87■■■□□ 2.37
COL9A2-211ENST00000496215 KIF1AQ12756 1690 aa29.86■■■□□ 2.37
COL9A2-211ENST00000496215 PXDNQ92626 1479 aa29.86■■■□□ 2.37
COL9A2-211ENST00000496215 ESCO1Q5FWF5 840 aa29.85■■■□□ 2.37
COL9A2-211ENST00000496215 POTEAQ6S8J7 498 aa29.85■■■□□ 2.37
COL9A2-211ENST00000496215 LRRC59Q96AG4 307 aaKnown RBP29.85■■■□□ 2.37
COL9A2-211ENST00000496215 POGKQ9P215 609 aa29.84■■■□□ 2.37
COL9A2-211ENST00000496215 TRAK1Q9UPV9 953 aa29.84■■■□□ 2.37
COL9A2-211ENST00000496215 USP32Q8NFA0 1604 aa29.84■■■□□ 2.37
COL9A2-211ENST00000496215 SIN3AQ96ST3 1273 aa29.82■■■□□ 2.36
COL9A2-211ENST00000496215 NUTM2BA6NNL0 878 aaPredicted RBP29.79■■■□□ 2.36
COL9A2-211ENST00000496215 NUTM2EB1AL46 878 aaPredicted RBP29.79■■■□□ 2.36
COL9A2-211ENST00000496215 NUTM2AQ8IVF1 878 aaPredicted RBP29.79■■■□□ 2.36
COL9A2-211ENST00000496215 COL22A1Q8NFW1 1626 aaPredicted RBP29.78■■■□□ 2.36
COL9A2-211ENST00000496215 NEUROD1Q13562 356 aa29.78■■■□□ 2.36
COL9A2-211ENST00000496215 TRPM1Q7Z4N2 1603 aa29.78■■■□□ 2.36
COL9A2-211ENST00000496215 FOXO3O43524 673 aa29.77■■■□□ 2.36
COL9A2-211ENST00000496215 L3MBTL2Q969R5 705 aa29.77■■■□□ 2.36
COL9A2-211ENST00000496215 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
COL9A2-211ENST00000496215 NPHP3Q7Z494 1330 aa29.75■■■□□ 2.35
COL9A2-211ENST00000496215 ANKARQ7Z5J8 1434 aa29.74■■■□□ 2.35
COL9A2-211ENST00000496215 MEX3CQ5U5Q3 659 aaKnown RBP29.74■■■□□ 2.35
COL9A2-211ENST00000496215 HIRIP3Q9BW71 556 aaPredicted RBP29.74■■■□□ 2.35
COL9A2-211ENST00000496215 MINK1Q8N4C8 1332 aaPredicted RBP29.73■■■□□ 2.35
COL9A2-211ENST00000496215 NBPF1Q3BBV0 1214 aa29.73■■■□□ 2.35
COL9A2-211ENST00000496215 TULP4Q9NRJ4 1543 aa29.72■■■□□ 2.35
COL9A2-211ENST00000496215 EIF3AQ14152 1382 aaKnown RBP29.72■■■□□ 2.35
COL9A2-211ENST00000496215 PRR36Q9H6K5 1346 aa29.69■■■□□ 2.34
COL9A2-211ENST00000496215 ITSN1Q15811 1721 aa29.68■■■□□ 2.34
COL9A2-211ENST00000496215 PHF8Q9UPP1 1060 aa29.67■■■□□ 2.34
COL9A2-211ENST00000496215 QRICH2Q9H0J4 1663 aa29.66■■■□□ 2.34
COL9A2-211ENST00000496215 TONSLQ96HA7 1378 aa29.64■■■□□ 2.34
COL9A2-211ENST00000496215 AFF2P51816 1311 aa29.64■■■□□ 2.34
COL9A2-211ENST00000496215 WASLO00401 505 aaPredicted RBP29.63■■■□□ 2.33
COL9A2-211ENST00000496215 ADAMTS2O95450 1211 aa29.61■■■□□ 2.33
COL9A2-211ENST00000496215 KRT28Q7Z3Y7 464 aa29.61■■■□□ 2.33
COL9A2-211ENST00000496215 C8orf37Q96NL8 207 aa29.61■■■□□ 2.33
COL9A2-211ENST00000496215 TRPM3Q9HCF6 1732 aaPredicted RBP29.61■■■□□ 2.33
COL9A2-211ENST00000496215 MARF1Q9Y4F3 1742 aaKnown RBP29.61■■■□□ 2.33
COL9A2-211ENST00000496215 SPATA31A3Q5VYP0 1347 aa29.61■■■□□ 2.33
COL9A2-211ENST00000496215 ATP7BP35670 1465 aa29.61■■■□□ 2.33
COL9A2-211ENST00000496215 ZNF772Q68DY9 489 aaPredicted RBP29.6■■■□□ 2.33
COL9A2-211ENST00000496215 ROCK2O75116 1388 aaKnown RBP29.6■■■□□ 2.33
COL9A2-211ENST00000496215 TOPAZ1Q8N9V7 1692 aa29.6■■■□□ 2.33
COL9A2-211ENST00000496215 PMFBP1Q8TBY8 1022 aa29.59■■■□□ 2.33
COL9A2-211ENST00000496215 TNS3Q68CZ2 1445 aa29.58■■■□□ 2.33
COL9A2-211ENST00000496215 CENPJQ9HC77 1338 aaPredicted RBP29.56■■■□□ 2.32
COL9A2-211ENST00000496215 ABCA3Q99758 1704 aa29.56■■■□□ 2.32
COL9A2-211ENST00000496215 SBNO1A3KN83 1393 aa29.53■■■□□ 2.32
COL9A2-211ENST00000496215 RALGAPBQ86X10 1494 aa29.53■■■□□ 2.32
COL9A2-211ENST00000496215 ALS2Q96Q42 1657 aa29.53■■■□□ 2.32
COL9A2-211ENST00000496215 NBPF8Q3BBV2 869 aa29.52■■■□□ 2.32
COL9A2-211ENST00000496215 GPRASP1Q5JY77 1395 aa29.51■■■□□ 2.31
COL9A2-211ENST00000496215 PSME1Q06323 249 aa29.5■■■□□ 2.31
COL9A2-211ENST00000496215 NGLY1Q96IV0 654 aa29.5■■■□□ 2.31
COL9A2-211ENST00000496215 CDK19Q9BWU1 502 aa29.5■■■□□ 2.31
COL9A2-211ENST00000496215 NUDT16Q96DE0 195 aaKnown RBP29.49■■■□□ 2.31
COL9A2-211ENST00000496215 PCGF6Q9BYE7 350 aa29.49■■■□□ 2.31
COL9A2-211ENST00000496215 FNBP4Q8N3X1 1017 aaPredicted RBP29.46■■■□□ 2.31
COL9A2-211ENST00000496215 CRYBG1Q9Y4K1 1723 aa29.45■■■□□ 2.31
COL9A2-211ENST00000496215 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
COL9A2-211ENST00000496215 ARHGEF10O15013 1369 aa29.45■■■□□ 2.31
COL9A2-211ENST00000496215 CABLES1Q8TDN4 633 aa29.45■■■□□ 2.31
COL9A2-211ENST00000496215 CDK12Q9NYV4 1490 aaPredicted RBP29.44■■■□□ 2.3
COL9A2-211ENST00000496215 RXRBP28702 533 aa29.44■■■□□ 2.3
COL9A2-211ENST00000496215 QTRT2Q9H974 415 aaKnown RBP29.44■■■□□ 2.3
COL9A2-211ENST00000496215 NGDNQ8NEJ9 315 aaKnown RBP29.42■■■□□ 2.3
COL9A2-211ENST00000496215 USP21Q9UK80 565 aa29.42■■■□□ 2.3
COL9A2-211ENST00000496215 RGS12O14924 1447 aa29.42■■■□□ 2.3
COL9A2-211ENST00000496215 ATRNO75882 1429 aa29.41■■■□□ 2.3
COL9A2-211ENST00000496215 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
COL9A2-211ENST00000496215 PLEKHG5O94827 1062 aa29.4■■■□□ 2.3
COL9A2-211ENST00000496215 SRPK2P78362 688 aaKnown RBP29.4■■■□□ 2.3
COL9A2-211ENST00000496215 LMOD2Q6P5Q4 547 aa29.4■■■□□ 2.3
COL9A2-211ENST00000496215 SLIT2O94813 1529 aa29.4■■■□□ 2.3
COL9A2-211ENST00000496215 POLR3AO14802 1390 aaPredicted RBP29.39■■■□□ 2.3
COL9A2-211ENST00000496215 PLCH1Q4KWH8 1693 aa29.39■■■□□ 2.3
COL9A2-211ENST00000496215 CARD11Q9BXL7 1154 aa29.38■■■□□ 2.29
COL9A2-211ENST00000496215 PPIP5K1Q6PFW1 1433 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms