RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 NHSL1Q5SYE7 1610 aa24.76■■□□□ 1.55
COMMD3-214ENST00000496071 ILDR2Q71H61 639 aa24.76■■□□□ 1.55
COMMD3-214ENST00000496071 PLEKHH1Q9ULM0 1364 aa24.73■■□□□ 1.55
COMMD3-214ENST00000496071 ADGRB1O14514 1584 aa24.72■■□□□ 1.55
COMMD3-214ENST00000496071 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
COMMD3-214ENST00000496071 SPATA31A6Q5VVP1 1343 aa24.71■■□□□ 1.55
COMMD3-214ENST00000496071 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
COMMD3-214ENST00000496071 ORAI2Q96SN7 254 aa24.71■■□□□ 1.55
COMMD3-214ENST00000496071 SHPRHQ149N8 1683 aa24.71■■□□□ 1.55
COMMD3-214ENST00000496071 PRAM1Q96QH2 718 aa24.69■■□□□ 1.54
COMMD3-214ENST00000496071 POGKQ9P215 609 aa24.69■■□□□ 1.54
COMMD3-214ENST00000496071 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
COMMD3-214ENST00000496071 FMN2Q9NZ56 1722 aa24.66■■□□□ 1.54
COMMD3-214ENST00000496071 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
COMMD3-214ENST00000496071 DDX17Q92841 729 aaKnown RBP24.65■■□□□ 1.54
COMMD3-214ENST00000496071 KIAA1210Q9ULL0 1709 aa24.65■■□□□ 1.54
COMMD3-214ENST00000496071 SOS2Q07890 1332 aaPredicted RBP24.63■■□□□ 1.53
COMMD3-214ENST00000496071 SAFB2Q14151 953 aaKnown RBP eCLIP24.63■■□□□ 1.53
COMMD3-214ENST00000496071 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
COMMD3-214ENST00000496071 SIN3AQ96ST3 1273 aa24.62■■□□□ 1.53
COMMD3-214ENST00000496071 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
COMMD3-214ENST00000496071 RGS17Q9UGC6 210 aaPredicted RBP24.6■■□□□ 1.53
COMMD3-214ENST00000496071 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
COMMD3-214ENST00000496071 L3MBTL2Q969R5 705 aa24.59■■□□□ 1.53
COMMD3-214ENST00000496071 ADGRB2O60241 1585 aa24.59■■□□□ 1.53
COMMD3-214ENST00000496071 SOCS7O14512 581 aa24.58■■□□□ 1.53
COMMD3-214ENST00000496071 MEX3CQ5U5Q3 659 aaKnown RBP24.58■■□□□ 1.53
COMMD3-214ENST00000496071 PNPLA6Q8IY17 1366 aa24.57■■□□□ 1.52
COMMD3-214ENST00000496071 KIF1AQ12756 1690 aa24.57■■□□□ 1.52
COMMD3-214ENST00000496071 FOXO3O43524 673 aa24.57■■□□□ 1.52
COMMD3-214ENST00000496071 LRP6O75581 1613 aa24.57■■□□□ 1.52
COMMD3-214ENST00000496071 ARHGEF28Q8N1W1 1705 aaKnown RBP24.56■■□□□ 1.52
COMMD3-214ENST00000496071 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD3-214ENST00000496071 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD3-214ENST00000496071 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD3-214ENST00000496071 RGPD8O14715 1765 aaPredicted RBP24.55■■□□□ 1.52
COMMD3-214ENST00000496071 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
COMMD3-214ENST00000496071 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
COMMD3-214ENST00000496071 ANKARQ7Z5J8 1434 aa24.53■■□□□ 1.52
COMMD3-214ENST00000496071 PXDNQ92626 1479 aa24.52■■□□□ 1.52
COMMD3-214ENST00000496071 NBPF1Q3BBV0 1214 aa24.52■■□□□ 1.52
COMMD3-214ENST00000496071 HIRIP3Q9BW71 556 aaPredicted RBP24.52■■□□□ 1.52
COMMD3-214ENST00000496071 PHF8Q9UPP1 1060 aa24.52■■□□□ 1.52
COMMD3-214ENST00000496071 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
COMMD3-214ENST00000496071 ZNF772Q68DY9 489 aaPredicted RBP24.49■■□□□ 1.51
COMMD3-214ENST00000496071 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
COMMD3-214ENST00000496071 POTEAQ6S8J7 498 aa24.48■■□□□ 1.51
COMMD3-214ENST00000496071 USP32Q8NFA0 1604 aa24.48■■□□□ 1.51
COMMD3-214ENST00000496071 COL22A1Q8NFW1 1626 aaPredicted RBP24.47■■□□□ 1.51
COMMD3-214ENST00000496071 PSME1Q06323 249 aa24.47■■□□□ 1.51
COMMD3-214ENST00000496071 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
COMMD3-214ENST00000496071 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
COMMD3-214ENST00000496071 TRPM1Q7Z4N2 1603 aa24.44■■□□□ 1.5
COMMD3-214ENST00000496071 SPATA31A3Q5VYP0 1347 aa24.43■■□□□ 1.5
COMMD3-214ENST00000496071 POTEDQ86YR6 584 aa24.42■■□□□ 1.5
COMMD3-214ENST00000496071 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
COMMD3-214ENST00000496071 PRR36Q9H6K5 1346 aa24.41■■□□□ 1.5
COMMD3-214ENST00000496071 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
COMMD3-214ENST00000496071 AFF2P51816 1311 aa24.4■■□□□ 1.5
COMMD3-214ENST00000496071 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
COMMD3-214ENST00000496071 ADAMTS2O95450 1211 aa24.4■■□□□ 1.5
COMMD3-214ENST00000496071 C8orf37Q96NL8 207 aa24.4■■□□□ 1.5
COMMD3-214ENST00000496071 CDK19Q9BWU1 502 aa24.4■■□□□ 1.5
COMMD3-214ENST00000496071 SBNO1A3KN83 1393 aa24.4■■□□□ 1.5
COMMD3-214ENST00000496071 ITSN1Q15811 1721 aa24.39■■□□□ 1.5
COMMD3-214ENST00000496071 NUDT16Q96DE0 195 aaKnown RBP24.38■■□□□ 1.49
COMMD3-214ENST00000496071 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
COMMD3-214ENST00000496071 ROCK2O75116 1388 aaKnown RBP24.38■■□□□ 1.49
COMMD3-214ENST00000496071 TNS3Q68CZ2 1445 aa24.37■■□□□ 1.49
COMMD3-214ENST00000496071 GPRASP1Q5JY77 1395 aa24.37■■□□□ 1.49
COMMD3-214ENST00000496071 ATP7BP35670 1465 aa24.35■■□□□ 1.49
COMMD3-214ENST00000496071 NBPF8Q3BBV2 869 aa24.35■■□□□ 1.49
COMMD3-214ENST00000496071 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
COMMD3-214ENST00000496071 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
COMMD3-214ENST00000496071 ARHGEF10O15013 1369 aa24.34■■□□□ 1.49
COMMD3-214ENST00000496071 MARF1Q9Y4F3 1742 aaKnown RBP24.34■■□□□ 1.49
COMMD3-214ENST00000496071 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.49
COMMD3-214ENST00000496071 RXRBP28702 533 aa24.32■■□□□ 1.48
COMMD3-214ENST00000496071 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
COMMD3-214ENST00000496071 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
COMMD3-214ENST00000496071 SRPK2P78362 688 aaKnown RBP24.3■■□□□ 1.48
COMMD3-214ENST00000496071 FNBP4Q8N3X1 1017 aaPredicted RBP24.3■■□□□ 1.48
COMMD3-214ENST00000496071 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
COMMD3-214ENST00000496071 HAP1P54257 671 aaPredicted RBP24.29■■□□□ 1.48
COMMD3-214ENST00000496071 USP21Q9UK80 565 aa24.29■■□□□ 1.48
COMMD3-214ENST00000496071 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
COMMD3-214ENST00000496071 PLEKHG3A1L390 1219 aa24.28■■□□□ 1.48
COMMD3-214ENST00000496071 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
COMMD3-214ENST00000496071 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
COMMD3-214ENST00000496071 ALS2Q96Q42 1657 aa24.26■■□□□ 1.47
COMMD3-214ENST00000496071 EVC2Q86UK5 1308 aa24.26■■□□□ 1.47
COMMD3-214ENST00000496071 POLR3AO14802 1390 aaPredicted RBP24.26■■□□□ 1.47
COMMD3-214ENST00000496071 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
COMMD3-214ENST00000496071 ACEP12821 1306 aa24.25■■□□□ 1.47
COMMD3-214ENST00000496071 RALGAPBQ86X10 1494 aa24.25■■□□□ 1.47
COMMD3-214ENST00000496071 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
COMMD3-214ENST00000496071 PAK3O75914 559 aaPredicted RBP24.24■■□□□ 1.47
COMMD3-214ENST00000496071 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
COMMD3-214ENST00000496071 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
COMMD3-214ENST00000496071 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms