RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ORAI2Q96SN7 254 aa26.17■■□□□ 1.78
COL20A1-207ENST00000494913 KNDC1Q76NI1 1749 aa26.16■■□□□ 1.78
COL20A1-207ENST00000494913 NUTM2FA1L443 756 aa26.12■■□□□ 1.77
COL20A1-207ENST00000494913 PRAM1Q96QH2 718 aa26.12■■□□□ 1.77
COL20A1-207ENST00000494913 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
COL20A1-207ENST00000494913 SAFB2Q14151 953 aaKnown RBP eCLIP26.11■■□□□ 1.77
COL20A1-207ENST00000494913 ESCO1Q5FWF5 840 aa26.11■■□□□ 1.77
COL20A1-207ENST00000494913 LRRC59Q96AG4 307 aaKnown RBP26.11■■□□□ 1.77
COL20A1-207ENST00000494913 NHSL1Q5SYE7 1610 aa26.11■■□□□ 1.77
COL20A1-207ENST00000494913 SPATA31A6Q5VVP1 1343 aa26.11■■□□□ 1.77
COL20A1-207ENST00000494913 RGS17Q9UGC6 210 aaPredicted RBP26.11■■□□□ 1.77
COL20A1-207ENST00000494913 POGKQ9P215 609 aa26.1■■□□□ 1.77
COL20A1-207ENST00000494913 TRAK1Q9UPV9 953 aa26.1■■□□□ 1.77
COL20A1-207ENST00000494913 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
COL20A1-207ENST00000494913 TRIM26Q12899 539 aaPredicted RBP26.08■■□□□ 1.77
COL20A1-207ENST00000494913 SOCS7O14512 581 aa26.07■■□□□ 1.76
COL20A1-207ENST00000494913 SHPRHQ149N8 1683 aa26.06■■□□□ 1.76
COL20A1-207ENST00000494913 SIN3AQ96ST3 1273 aa26.05■■□□□ 1.76
COL20A1-207ENST00000494913 DLC1Q96QB1 1528 aa26.05■■□□□ 1.76
COL20A1-207ENST00000494913 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
COL20A1-207ENST00000494913 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
COL20A1-207ENST00000494913 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
COL20A1-207ENST00000494913 MEX3CQ5U5Q3 659 aaKnown RBP26.04■■□□□ 1.76
COL20A1-207ENST00000494913 SOS2Q07890 1332 aaPredicted RBP26.04■■□□□ 1.76
COL20A1-207ENST00000494913 LRP6O75581 1613 aa26.02■■□□□ 1.76
COL20A1-207ENST00000494913 FOXO3O43524 673 aa26.02■■□□□ 1.76
COL20A1-207ENST00000494913 NEUROD1Q13562 356 aa26.02■■□□□ 1.76
COL20A1-207ENST00000494913 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
COL20A1-207ENST00000494913 PNPLA6Q8IY17 1366 aa25.99■■□□□ 1.75
COL20A1-207ENST00000494913 L3MBTL2Q969R5 705 aa25.99■■□□□ 1.75
COL20A1-207ENST00000494913 FMN2Q9NZ56 1722 aa25.99■■□□□ 1.75
COL20A1-207ENST00000494913 POTEAQ6S8J7 498 aa25.98■■□□□ 1.75
COL20A1-207ENST00000494913 HIRIP3Q9BW71 556 aaPredicted RBP25.98■■□□□ 1.75
COL20A1-207ENST00000494913 MINK1Q8N4C8 1332 aaPredicted RBP25.98■■□□□ 1.75
COL20A1-207ENST00000494913 XPCQ01831 940 aaPredicted RBP25.98■■□□□ 1.75
COL20A1-207ENST00000494913 NBPF1Q3BBV0 1214 aa25.96■■□□□ 1.75
COL20A1-207ENST00000494913 PHF8Q9UPP1 1060 aa25.93■■□□□ 1.74
COL20A1-207ENST00000494913 PXDNQ92626 1479 aa25.92■■□□□ 1.74
COL20A1-207ENST00000494913 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
COL20A1-207ENST00000494913 RGPD8O14715 1765 aaPredicted RBP25.9■■□□□ 1.74
COL20A1-207ENST00000494913 ADGRB2O60241 1585 aa25.89■■□□□ 1.74
COL20A1-207ENST00000494913 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.73
COL20A1-207ENST00000494913 ZNF772Q68DY9 489 aaPredicted RBP25.89■■□□□ 1.73
COL20A1-207ENST00000494913 ADAMTS2O95450 1211 aa25.88■■□□□ 1.73
COL20A1-207ENST00000494913 KRT28Q7Z3Y7 464 aa25.88■■□□□ 1.73
COL20A1-207ENST00000494913 ARHGEF28Q8N1W1 1705 aaKnown RBP25.88■■□□□ 1.73
COL20A1-207ENST00000494913 KIF1AQ12756 1690 aa25.87■■□□□ 1.73
COL20A1-207ENST00000494913 ANKARQ7Z5J8 1434 aa25.87■■□□□ 1.73
COL20A1-207ENST00000494913 PMFBP1Q8TBY8 1022 aa25.86■■□□□ 1.73
COL20A1-207ENST00000494913 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
COL20A1-207ENST00000494913 AFF2P51816 1311 aa25.84■■□□□ 1.73
COL20A1-207ENST00000494913 EIF3AQ14152 1382 aaKnown RBP25.84■■□□□ 1.73
COL20A1-207ENST00000494913 PSME1Q06323 249 aa25.84■■□□□ 1.73
COL20A1-207ENST00000494913 PRR36Q9H6K5 1346 aa25.84■■□□□ 1.73
COL20A1-207ENST00000494913 USP32Q8NFA0 1604 aa25.83■■□□□ 1.73
COL20A1-207ENST00000494913 SPATA31A3Q5VYP0 1347 aa25.83■■□□□ 1.73
COL20A1-207ENST00000494913 NGLY1Q96IV0 654 aa25.82■■□□□ 1.72
COL20A1-207ENST00000494913 TULP4Q9NRJ4 1543 aa25.81■■□□□ 1.72
COL20A1-207ENST00000494913 CDK19Q9BWU1 502 aa25.8■■□□□ 1.72
COL20A1-207ENST00000494913 COL22A1Q8NFW1 1626 aaPredicted RBP25.8■■□□□ 1.72
COL20A1-207ENST00000494913 NUDT16Q96DE0 195 aaKnown RBP25.78■■□□□ 1.72
COL20A1-207ENST00000494913 CENPJQ9HC77 1338 aaPredicted RBP25.77■■□□□ 1.72
COL20A1-207ENST00000494913 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
COL20A1-207ENST00000494913 NBPF8Q3BBV2 869 aa25.75■■□□□ 1.71
COL20A1-207ENST00000494913 NGDNQ8NEJ9 315 aaKnown RBP25.75■■□□□ 1.71
COL20A1-207ENST00000494913 TNS3Q68CZ2 1445 aa25.75■■□□□ 1.71
COL20A1-207ENST00000494913 SBNO1A3KN83 1393 aa25.75■■□□□ 1.71
COL20A1-207ENST00000494913 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
COL20A1-207ENST00000494913 RXRBP28702 533 aa25.74■■□□□ 1.71
COL20A1-207ENST00000494913 QTRT2Q9H974 415 aaKnown RBP25.74■■□□□ 1.71
COL20A1-207ENST00000494913 TRPM1Q7Z4N2 1603 aa25.74■■□□□ 1.71
COL20A1-207ENST00000494913 GPRASP1Q5JY77 1395 aa25.74■■□□□ 1.71
COL20A1-207ENST00000494913 TONSLQ96HA7 1378 aa25.74■■□□□ 1.71
COL20A1-207ENST00000494913 PLEKHG5O94827 1062 aa25.72■■□□□ 1.71
COL20A1-207ENST00000494913 ATP7BP35670 1465 aa25.71■■□□□ 1.71
COL20A1-207ENST00000494913 CABLES1Q8TDN4 633 aa25.71■■□□□ 1.71
COL20A1-207ENST00000494913 USP21Q9UK80 565 aa25.71■■□□□ 1.71
COL20A1-207ENST00000494913 FNBP4Q8N3X1 1017 aaPredicted RBP25.7■■□□□ 1.7
COL20A1-207ENST00000494913 HAP1P54257 671 aaPredicted RBP25.69■■□□□ 1.7
COL20A1-207ENST00000494913 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
COL20A1-207ENST00000494913 CCDC61Q9Y6R9 512 aa25.69■■□□□ 1.7
COL20A1-207ENST00000494913 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
COL20A1-207ENST00000494913 PAK3O75914 559 aaPredicted RBP25.66■■□□□ 1.7
COL20A1-207ENST00000494913 CABP2Q9NPB3 220 aa25.66■■□□□ 1.7
COL20A1-207ENST00000494913 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
COL20A1-207ENST00000494913 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
COL20A1-207ENST00000494913 QRICH2Q9H0J4 1663 aa25.64■■□□□ 1.7
COL20A1-207ENST00000494913 PLEKHG3A1L390 1219 aa25.64■■□□□ 1.69
COL20A1-207ENST00000494913 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.69
COL20A1-207ENST00000494913 TRPC5Q9UL62 973 aaPredicted RBP25.64■■□□□ 1.69
COL20A1-207ENST00000494913 ACEP12821 1306 aa25.64■■□□□ 1.69
COL20A1-207ENST00000494913 TRPM3Q9HCF6 1732 aaPredicted RBP25.63■■□□□ 1.69
COL20A1-207ENST00000494913 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
COL20A1-207ENST00000494913 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
COL20A1-207ENST00000494913 BCL9LQ86UU0 1499 aa25.61■■□□□ 1.69
COL20A1-207ENST00000494913 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
COL20A1-207ENST00000494913 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
COL20A1-207ENST00000494913 TOPAZ1Q8N9V7 1692 aa25.59■■□□□ 1.69
COL20A1-207ENST00000494913 PPIP5K1Q6PFW1 1433 aa25.58■■□□□ 1.69
COL20A1-207ENST00000494913 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms