RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MST1RQ04912 1400 aa10.06□□□□□ -0.8
TOP3A-207ENST00000493648 KNDC1Q76NI1 1749 aa10.05□□□□□ -0.8
TOP3A-207ENST00000493648 NALCNQ8IZF0 1738 aa10.05□□□□□ -0.8
TOP3A-207ENST00000493648 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
TOP3A-207ENST00000493648 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
TOP3A-207ENST00000493648 PHLPP1O60346 1717 aa10.04□□□□□ -0.8
TOP3A-207ENST00000493648 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
TOP3A-207ENST00000493648 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
TOP3A-207ENST00000493648 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
TOP3A-207ENST00000493648 ESCO1Q5FWF5 840 aa10.03□□□□□ -0.8
TOP3A-207ENST00000493648 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
TOP3A-207ENST00000493648 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
TOP3A-207ENST00000493648 JCADQ9P266 1359 aa10.02□□□□□ -0.8
TOP3A-207ENST00000493648 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
TOP3A-207ENST00000493648 PCGF6Q9BYE7 350 aa10.02□□□□□ -0.81
TOP3A-207ENST00000493648 DLC1Q96QB1 1528 aa10.02□□□□□ -0.81
TOP3A-207ENST00000493648 ADGRB1O14514 1584 aa10.01□□□□□ -0.81
TOP3A-207ENST00000493648 AHDC1Q5TGY3 1603 aaPredicted RBP10.01□□□□□ -0.81
TOP3A-207ENST00000493648 CDC42BPGQ6DT37 1551 aa10.01□□□□□ -0.81
TOP3A-207ENST00000493648 KIAA1210Q9ULL0 1709 aa10□□□□□ -0.81
TOP3A-207ENST00000493648 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
TOP3A-207ENST00000493648 DDX17Q92841 729 aaKnown RBP10□□□□□ -0.81
TOP3A-207ENST00000493648 SPATA31A6Q5VVP1 1343 aa10□□□□□ -0.81
TOP3A-207ENST00000493648 MED1Q15648 1581 aaPredicted RBP10□□□□□ -0.81
TOP3A-207ENST00000493648 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
TOP3A-207ENST00000493648 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
TOP3A-207ENST00000493648 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
TOP3A-207ENST00000493648 TONSLQ96HA7 1378 aa9.99□□□□□ -0.81
TOP3A-207ENST00000493648 NHSL1Q5SYE7 1610 aa9.98□□□□□ -0.81
TOP3A-207ENST00000493648 WASLO00401 505 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-207ENST00000493648 FOXO3O43524 673 aa9.98□□□□□ -0.81
TOP3A-207ENST00000493648 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-207ENST00000493648 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
TOP3A-207ENST00000493648 MEX3CQ5U5Q3 659 aaKnown RBP9.97□□□□□ -0.81
TOP3A-207ENST00000493648 PHF8Q9UPP1 1060 aa9.97□□□□□ -0.81
TOP3A-207ENST00000493648 EIF3AQ14152 1382 aaKnown RBP9.97□□□□□ -0.81
TOP3A-207ENST00000493648 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.81
TOP3A-207ENST00000493648 NUTM2BA6NNL0 878 aaPredicted RBP9.96□□□□□ -0.82
TOP3A-207ENST00000493648 NUTM2EB1AL46 878 aaPredicted RBP9.96□□□□□ -0.82
TOP3A-207ENST00000493648 PSME1Q06323 249 aa9.96□□□□□ -0.82
TOP3A-207ENST00000493648 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.82
TOP3A-207ENST00000493648 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
TOP3A-207ENST00000493648 KRT28Q7Z3Y7 464 aa9.95□□□□□ -0.82
TOP3A-207ENST00000493648 CDK19Q9BWU1 502 aa9.95□□□□□ -0.82
TOP3A-207ENST00000493648 ROCK2O75116 1388 aaKnown RBP9.95□□□□□ -0.82
TOP3A-207ENST00000493648 SHPRHQ149N8 1683 aa9.95□□□□□ -0.82
TOP3A-207ENST00000493648 ARHGEF28Q8N1W1 1705 aaKnown RBP9.95□□□□□ -0.82
TOP3A-207ENST00000493648 RGPD8O14715 1765 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-207ENST00000493648 ANKARQ7Z5J8 1434 aa9.94□□□□□ -0.82
TOP3A-207ENST00000493648 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-207ENST00000493648 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
TOP3A-207ENST00000493648 NBPF8Q3BBV2 869 aa9.94□□□□□ -0.82
TOP3A-207ENST00000493648 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
TOP3A-207ENST00000493648 KIF1AQ12756 1690 aa9.93□□□□□ -0.82
TOP3A-207ENST00000493648 ADGRB2O60241 1585 aa9.93□□□□□ -0.82
TOP3A-207ENST00000493648 PNPLA6Q8IY17 1366 aa9.93□□□□□ -0.82
TOP3A-207ENST00000493648 CLSPNQ9HAW4 1339 aa9.93□□□□□ -0.82
TOP3A-207ENST00000493648 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
TOP3A-207ENST00000493648 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
TOP3A-207ENST00000493648 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
TOP3A-207ENST00000493648 ZNF772Q68DY9 489 aaPredicted RBP9.92□□□□□ -0.82
TOP3A-207ENST00000493648 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
TOP3A-207ENST00000493648 CARD11Q9BXL7 1154 aa9.92□□□□□ -0.82
TOP3A-207ENST00000493648 TIMELESSQ9UNS1 1208 aa9.92□□□□□ -0.82
TOP3A-207ENST00000493648 PXDNQ92626 1479 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 GPRASP1Q5JY77 1395 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 SPATA31A3Q5VYP0 1347 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 PRR36Q9H6K5 1346 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 HOXD11P31277 338 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-207ENST00000493648 SRPK2P78362 688 aaKnown RBP9.91□□□□□ -0.82
TOP3A-207ENST00000493648 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-207ENST00000493648 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 TULP4Q9NRJ4 1543 aa9.91□□□□□ -0.82
TOP3A-207ENST00000493648 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
TOP3A-207ENST00000493648 LMOD2Q6P5Q4 547 aa9.9□□□□□ -0.82
TOP3A-207ENST00000493648 NGLY1Q96IV0 654 aa9.9□□□□□ -0.82
TOP3A-207ENST00000493648 LRP6O75581 1613 aa9.89□□□□□ -0.83
TOP3A-207ENST00000493648 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
TOP3A-207ENST00000493648 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
TOP3A-207ENST00000493648 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
TOP3A-207ENST00000493648 C8orf37Q96NL8 207 aa9.89□□□□□ -0.83
TOP3A-207ENST00000493648 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
TOP3A-207ENST00000493648 PLEKHG3A1L390 1219 aa9.88□□□□□ -0.83
TOP3A-207ENST00000493648 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
TOP3A-207ENST00000493648 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-207ENST00000493648 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-207ENST00000493648 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
TOP3A-207ENST00000493648 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 AFF2P51816 1311 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 COL22A1Q8NFW1 1626 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-207ENST00000493648 SOCS7O14512 581 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 ARHGEF10O15013 1369 aa9.87□□□□□ -0.83
TOP3A-207ENST00000493648 ACEP12821 1306 aa9.86□□□□□ -0.83
TOP3A-207ENST00000493648 ATP7BP35670 1465 aa9.86□□□□□ -0.83
TOP3A-207ENST00000493648 RALGAPBQ86X10 1494 aa9.86□□□□□ -0.83
TOP3A-207ENST00000493648 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
TOP3A-207ENST00000493648 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms