RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 DDX17Q92841 729 aaKnown RBP34.47■■■■□ 3.11
RNF38-208ENST00000488058 STAC3Q96MF2 364 aa34.47■■■■□ 3.11
RNF38-208ENST00000488058 ORAI2Q96SN7 254 aa34.46■■■■□ 3.11
RNF38-208ENST00000488058 ADGRB1O14514 1584 aa34.44■■■■□ 3.1
RNF38-208ENST00000488058 NUTM2FA1L443 756 aa34.43■■■■□ 3.1
RNF38-208ENST00000488058 SAFB2Q14151 953 aaKnown RBP eCLIP34.43■■■■□ 3.1
RNF38-208ENST00000488058 SIRT1Q96EB6 747 aa34.43■■■■□ 3.1
RNF38-208ENST00000488058 SHPRHQ149N8 1683 aa34.43■■■■□ 3.1
RNF38-208ENST00000488058 TRIM26Q12899 539 aaPredicted RBP34.41■■■■□ 3.1
RNF38-208ENST00000488058 PRAM1Q96QH2 718 aa34.41■■■■□ 3.1
RNF38-208ENST00000488058 POGKQ9P215 609 aa34.4■■■■□ 3.1
RNF38-208ENST00000488058 TRAK1Q9UPV9 953 aa34.4■■■■□ 3.1
RNF38-208ENST00000488058 DLC1Q96QB1 1528 aa34.39■■■■□ 3.1
RNF38-208ENST00000488058 ESCO1Q5FWF5 840 aa34.38■■■■□ 3.09
RNF38-208ENST00000488058 FMN2Q9NZ56 1722 aa34.38■■■■□ 3.09
RNF38-208ENST00000488058 SPATA31A6Q5VVP1 1343 aa34.36■■■■□ 3.09
RNF38-208ENST00000488058 LRRC59Q96AG4 307 aaKnown RBP34.35■■■■□ 3.09
RNF38-208ENST00000488058 SIN3AQ96ST3 1273 aa34.34■■■■□ 3.09
RNF38-208ENST00000488058 LRP6O75581 1613 aa34.33■■■■□ 3.09
RNF38-208ENST00000488058 NUTM2BA6NNL0 878 aaPredicted RBP34.32■■■■□ 3.08
RNF38-208ENST00000488058 NUTM2EB1AL46 878 aaPredicted RBP34.32■■■■□ 3.08
RNF38-208ENST00000488058 MEX3CQ5U5Q3 659 aaKnown RBP34.32■■■■□ 3.08
RNF38-208ENST00000488058 NUTM2AQ8IVF1 878 aaPredicted RBP34.32■■■■□ 3.08
RNF38-208ENST00000488058 NEUROD1Q13562 356 aa34.31■■■■□ 3.08
RNF38-208ENST00000488058 RGS17Q9UGC6 210 aaPredicted RBP34.31■■■■□ 3.08
RNF38-208ENST00000488058 KIAA1210Q9ULL0 1709 aa34.27■■■■□ 3.08
RNF38-208ENST00000488058 SOS2Q07890 1332 aaPredicted RBP34.27■■■■□ 3.08
RNF38-208ENST00000488058 RGPD8O14715 1765 aaPredicted RBP34.26■■■■□ 3.08
RNF38-208ENST00000488058 PNPLA6Q8IY17 1366 aa34.26■■■■□ 3.08
RNF38-208ENST00000488058 NPHP3Q7Z494 1330 aa34.26■■■■□ 3.07
RNF38-208ENST00000488058 ARHGEF28Q8N1W1 1705 aaKnown RBP34.25■■■■□ 3.07
RNF38-208ENST00000488058 SOCS7O14512 581 aa34.25■■■■□ 3.07
RNF38-208ENST00000488058 MINK1Q8N4C8 1332 aaPredicted RBP34.25■■■■□ 3.07
RNF38-208ENST00000488058 FOXO3O43524 673 aa34.24■■■■□ 3.07
RNF38-208ENST00000488058 L3MBTL2Q969R5 705 aa34.24■■■■□ 3.07
RNF38-208ENST00000488058 HIRIP3Q9BW71 556 aaPredicted RBP34.24■■■■□ 3.07
RNF38-208ENST00000488058 XPCQ01831 940 aaPredicted RBP34.23■■■■□ 3.07
RNF38-208ENST00000488058 KIF1AQ12756 1690 aa34.22■■■■□ 3.07
RNF38-208ENST00000488058 ADGRB2O60241 1585 aa34.22■■■■□ 3.07
RNF38-208ENST00000488058 NBPF1Q3BBV0 1214 aa34.18■■■■□ 3.06
RNF38-208ENST00000488058 PXDNQ92626 1479 aa34.18■■■■□ 3.06
RNF38-208ENST00000488058 POTEAQ6S8J7 498 aa34.17■■■■□ 3.06
RNF38-208ENST00000488058 PHF8Q9UPP1 1060 aa34.15■■■■□ 3.06
RNF38-208ENST00000488058 USP32Q8NFA0 1604 aa34.14■■■■□ 3.06
RNF38-208ENST00000488058 ANKARQ7Z5J8 1434 aa34.13■■■■□ 3.05
RNF38-208ENST00000488058 WASLO00401 505 aaPredicted RBP34.1■■■■□ 3.05
RNF38-208ENST00000488058 EIF3AQ14152 1382 aaKnown RBP34.1■■■■□ 3.05
RNF38-208ENST00000488058 ADAMTS2O95450 1211 aa34.08■■■■□ 3.05
RNF38-208ENST00000488058 KRT28Q7Z3Y7 464 aa34.08■■■■□ 3.05
RNF38-208ENST00000488058 PMFBP1Q8TBY8 1022 aa34.08■■■■□ 3.05
RNF38-208ENST00000488058 TULP4Q9NRJ4 1543 aa34.08■■■■□ 3.05
RNF38-208ENST00000488058 COL22A1Q8NFW1 1626 aaPredicted RBP34.08■■■■□ 3.05
RNF38-208ENST00000488058 C8orf37Q96NL8 207 aa34.07■■■■□ 3.04
RNF38-208ENST00000488058 TRPM1Q7Z4N2 1603 aa34.06■■■■□ 3.04
RNF38-208ENST00000488058 ZNF772Q68DY9 489 aaPredicted RBP34.06■■■■□ 3.04
RNF38-208ENST00000488058 AFF2P51816 1311 aa34.04■■■■□ 3.04
RNF38-208ENST00000488058 PRR36Q9H6K5 1346 aa34.04■■■■□ 3.04
RNF38-208ENST00000488058 PSME1Q06323 249 aa34.02■■■■□ 3.04
RNF38-208ENST00000488058 SPATA31A3Q5VYP0 1347 aa34.01■■■■□ 3.03
RNF38-208ENST00000488058 TONSLQ96HA7 1378 aa34■■■■□ 3.03
RNF38-208ENST00000488058 NGLY1Q96IV0 654 aa33.98■■■■□ 3.03
RNF38-208ENST00000488058 ITSN1Q15811 1721 aa33.98■■■■□ 3.03
RNF38-208ENST00000488058 CENPJQ9HC77 1338 aaPredicted RBP33.98■■■■□ 3.03
RNF38-208ENST00000488058 ROCK2O75116 1388 aaKnown RBP33.98■■■■□ 3.03
RNF38-208ENST00000488058 CDK19Q9BWU1 502 aa33.97■■■■□ 3.03
RNF38-208ENST00000488058 QRICH2Q9H0J4 1663 aa33.96■■■■□ 3.03
RNF38-208ENST00000488058 TNS3Q68CZ2 1445 aa33.96■■■■□ 3.03
RNF38-208ENST00000488058 LMOD2Q6P5Q4 547 aa33.96■■■■□ 3.03
RNF38-208ENST00000488058 PLEKHG5O94827 1062 aa33.95■■■■□ 3.03
RNF38-208ENST00000488058 NUDT16Q96DE0 195 aaKnown RBP33.95■■■■□ 3.03
RNF38-208ENST00000488058 ATP7BP35670 1465 aa33.95■■■■□ 3.02
RNF38-208ENST00000488058 NBPF8Q3BBV2 869 aa33.93■■■■□ 3.02
RNF38-208ENST00000488058 NGDNQ8NEJ9 315 aaKnown RBP33.93■■■■□ 3.02
RNF38-208ENST00000488058 SBNO1A3KN83 1393 aa33.92■■■■□ 3.02
RNF38-208ENST00000488058 GPRASP1Q5JY77 1395 aa33.92■■■■□ 3.02
RNF38-208ENST00000488058 MARF1Q9Y4F3 1742 aaKnown RBP33.92■■■■□ 3.02
RNF38-208ENST00000488058 HAP1P54257 671 aaPredicted RBP33.89■■■■□ 3.02
RNF38-208ENST00000488058 TRPM3Q9HCF6 1732 aaPredicted RBP33.88■■■■□ 3.01
RNF38-208ENST00000488058 RXRBP28702 533 aa33.87■■■■□ 3.01
RNF38-208ENST00000488058 SRPK2P78362 688 aaKnown RBP33.87■■■■□ 3.01
RNF38-208ENST00000488058 TOPAZ1Q8N9V7 1692 aa33.87■■■■□ 3.01
RNF38-208ENST00000488058 ARHGEF10O15013 1369 aa33.86■■■■□ 3.01
RNF38-208ENST00000488058 CABLES1Q8TDN4 633 aa33.85■■■■□ 3.01
RNF38-208ENST00000488058 PCGF6Q9BYE7 350 aa33.85■■■■□ 3.01
RNF38-208ENST00000488058 QTRT2Q9H974 415 aaKnown RBP33.85■■■■□ 3.01
RNF38-208ENST00000488058 USP21Q9UK80 565 aa33.85■■■■□ 3.01
RNF38-208ENST00000488058 PAK3O75914 559 aaPredicted RBP33.83■■■■□ 3.01
RNF38-208ENST00000488058 CABP2Q9NPB3 220 aa33.82■■■■□ 3
RNF38-208ENST00000488058 CCDC61Q9Y6R9 512 aa33.82■■■■□ 3
RNF38-208ENST00000488058 ABCA3Q99758 1704 aa33.81■■■■□ 3
RNF38-208ENST00000488058 ALS2Q96Q42 1657 aa33.8■■■■□ 3
RNF38-208ENST00000488058 FNBP4Q8N3X1 1017 aaPredicted RBP33.79■■■■□ 3
RNF38-208ENST00000488058 CARD11Q9BXL7 1154 aa33.78■■■■□ 3
RNF38-208ENST00000488058 RALGAPBQ86X10 1494 aa33.77■■■■□ 3
RNF38-208ENST00000488058 ACEP12821 1306 aa33.77■■■■□ 3
RNF38-208ENST00000488058 RBM6P78332 1123 aaKnown RBP33.76■■■□□ 2.99
RNF38-208ENST00000488058 PPIP5K1Q6PFW1 1433 aa33.76■■■□□ 2.99
RNF38-208ENST00000488058 TRPC5Q9UL62 973 aaPredicted RBP33.75■■■□□ 2.99
RNF38-208ENST00000488058 EVC2Q86UK5 1308 aa33.75■■■□□ 2.99
RNF38-208ENST00000488058 POLR3AO14802 1390 aaPredicted RBP33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms