RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
SND1-212ENST00000485871 KIF7Q2M1P5 1343 aa15.86■□□□□ 0.13
SND1-212ENST00000485871 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
SND1-212ENST00000485871 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
SND1-212ENST00000485871 TULP4Q9NRJ4 1543 aa15.85■□□□□ 0.13
SND1-212ENST00000485871 SIRT1Q96EB6 747 aa15.85■□□□□ 0.13
SND1-212ENST00000485871 BCANQ96GW7 911 aa15.85■□□□□ 0.13
SND1-212ENST00000485871 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
SND1-212ENST00000485871 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
SND1-212ENST00000485871 MYOM1P52179 1685 aa15.84■□□□□ 0.13
SND1-212ENST00000485871 STK26Q9P289 416 aa15.84■□□□□ 0.13
SND1-212ENST00000485871 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
SND1-212ENST00000485871 ADGRB2O60241 1585 aa15.83■□□□□ 0.13
SND1-212ENST00000485871 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
SND1-212ENST00000485871 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
SND1-212ENST00000485871 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
SND1-212ENST00000485871 AMOTL2Q9Y2J4 779 aa15.8■□□□□ 0.12
SND1-212ENST00000485871 TMF1P82094 1093 aa15.79■□□□□ 0.12
SND1-212ENST00000485871 WAPLQ7Z5K2 1190 aa15.79■□□□□ 0.12
SND1-212ENST00000485871 NALCNQ8IZF0 1738 aa15.79■□□□□ 0.12
SND1-212ENST00000485871 SLC24A1O60721 1099 aa15.77■□□□□ 0.12
SND1-212ENST00000485871 KCNA6P17658 529 aa15.77■□□□□ 0.12
SND1-212ENST00000485871 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
SND1-212ENST00000485871 XIRP1Q702N8 1843 aaKnown RBP15.75■□□□□ 0.11
SND1-212ENST00000485871 POGKQ9P215 609 aa15.75■□□□□ 0.11
SND1-212ENST00000485871 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
SND1-212ENST00000485871 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
SND1-212ENST00000485871 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
SND1-212ENST00000485871 RGS17Q9UGC6 210 aaPredicted RBP15.74■□□□□ 0.11
SND1-212ENST00000485871 TOPAZ1Q8N9V7 1692 aa15.73■□□□□ 0.11
SND1-212ENST00000485871 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
SND1-212ENST00000485871 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
SND1-212ENST00000485871 USP32Q8NFA0 1604 aa15.72■□□□□ 0.11
SND1-212ENST00000485871 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
SND1-212ENST00000485871 CDC42BPGQ6DT37 1551 aa15.72■□□□□ 0.11
SND1-212ENST00000485871 CDCA8Q53HL2 280 aa15.72■□□□□ 0.11
SND1-212ENST00000485871 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
SND1-212ENST00000485871 ADGRL3Q9HAR2 1447 aa15.69■□□□□ 0.1
SND1-212ENST00000485871 ATP7BP35670 1465 aa15.69■□□□□ 0.1
SND1-212ENST00000485871 WASLO00401 505 aaPredicted RBP15.68■□□□□ 0.1
SND1-212ENST00000485871 CDK19Q9BWU1 502 aa15.68■□□□□ 0.1
SND1-212ENST00000485871 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
SND1-212ENST00000485871 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
SND1-212ENST00000485871 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
SND1-212ENST00000485871 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
SND1-212ENST00000485871 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
SND1-212ENST00000485871 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
SND1-212ENST00000485871 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
SND1-212ENST00000485871 NCOA3Q9Y6Q9 1424 aa15.66■□□□□ 0.1
SND1-212ENST00000485871 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
SND1-212ENST00000485871 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
SND1-212ENST00000485871 PRR36Q9H6K5 1346 aa15.65■□□□□ 0.1
SND1-212ENST00000485871 MON2Q7Z3U7 1717 aa15.64■□□□□ 0.09
SND1-212ENST00000485871 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
SND1-212ENST00000485871 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
SND1-212ENST00000485871 ANKARQ7Z5J8 1434 aa15.62■□□□□ 0.09
SND1-212ENST00000485871 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
SND1-212ENST00000485871 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
SND1-212ENST00000485871 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
SND1-212ENST00000485871 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
SND1-212ENST00000485871 PANK3Q9H999 370 aa15.61■□□□□ 0.09
SND1-212ENST00000485871 ANKRD36BQ8N2N9 1353 aa15.61■□□□□ 0.09
SND1-212ENST00000485871 DCCP43146 1447 aa15.6■□□□□ 0.09
SND1-212ENST00000485871 NRKQ7Z2Y5 1582 aa15.6■□□□□ 0.09
SND1-212ENST00000485871 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
SND1-212ENST00000485871 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
SND1-212ENST00000485871 CPSF1Q10570 1443 aaKnown RBP15.59■□□□□ 0.09
SND1-212ENST00000485871 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
SND1-212ENST00000485871 A0A1W2PP64 1363 aa15.58■□□□□ 0.08
SND1-212ENST00000485871 ANKRD26Q9UPS8 1709 aa15.57■□□□□ 0.08
SND1-212ENST00000485871 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
SND1-212ENST00000485871 KIF20BQ96Q89 1820 aa15.57■□□□□ 0.08
SND1-212ENST00000485871 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
SND1-212ENST00000485871 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
SND1-212ENST00000485871 MST1RQ04912 1400 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 NPC1L1Q9UHC9 1359 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 MIER1Q8N108 512 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
SND1-212ENST00000485871 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
SND1-212ENST00000485871 KIF1AQ12756 1690 aa15.54■□□□□ 0.08
SND1-212ENST00000485871 C1orf167Q5SNV9 1468 aa15.53■□□□□ 0.08
SND1-212ENST00000485871 POLR3AO14802 1390 aaPredicted RBP15.53■□□□□ 0.08
SND1-212ENST00000485871 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
SND1-212ENST00000485871 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
SND1-212ENST00000485871 MSH6P52701 1360 aa15.51■□□□□ 0.07
SND1-212ENST00000485871 PARD3Q8TEW0 1356 aa15.51■□□□□ 0.07
SND1-212ENST00000485871 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
SND1-212ENST00000485871 TERF2IPQ9NYB0 399 aa15.51■□□□□ 0.07
SND1-212ENST00000485871 EDC4Q6P2E9 1401 aaKnown RBP15.51■□□□□ 0.07
SND1-212ENST00000485871 ANP32CO43423 234 aa15.5■□□□□ 0.07
SND1-212ENST00000485871 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
SND1-212ENST00000485871 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
SND1-212ENST00000485871 USP54Q70EL1 1684 aa15.5■□□□□ 0.07
SND1-212ENST00000485871 USP6P35125 1406 aa15.5■□□□□ 0.07
SND1-212ENST00000485871 ACEP12821 1306 aa15.49■□□□□ 0.07
SND1-212ENST00000485871 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
SND1-212ENST00000485871 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
SND1-212ENST00000485871 TRPM3Q9HCF6 1732 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms