RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PLEKHH1Q9ULM0 1364 aa20.15■□□□□ 0.82
VARS-225ENST00000482996 CDC42BPGQ6DT37 1551 aa20.15■□□□□ 0.82
VARS-225ENST00000482996 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
VARS-225ENST00000482996 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
VARS-225ENST00000482996 TRIM26Q12899 539 aaPredicted RBP20.12■□□□□ 0.81
VARS-225ENST00000482996 LRRC59Q96AG4 307 aaKnown RBP20.12■□□□□ 0.81
VARS-225ENST00000482996 POGKQ9P215 609 aa20.12■□□□□ 0.81
VARS-225ENST00000482996 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
VARS-225ENST00000482996 PRAM1Q96QH2 718 aa20.11■□□□□ 0.81
VARS-225ENST00000482996 ADGRB1O14514 1584 aa20.1■□□□□ 0.81
VARS-225ENST00000482996 ESCO1Q5FWF5 840 aa20.1■□□□□ 0.81
VARS-225ENST00000482996 DDX17Q92841 729 aaKnown RBP20.1■□□□□ 0.81
VARS-225ENST00000482996 DLC1Q96QB1 1528 aa20.1■□□□□ 0.81
VARS-225ENST00000482996 SAFB2Q14151 953 aaKnown RBP eCLIP20.09■□□□□ 0.81
VARS-225ENST00000482996 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
VARS-225ENST00000482996 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
VARS-225ENST00000482996 NUTM2FA1L443 756 aa20.08■□□□□ 0.81
VARS-225ENST00000482996 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
VARS-225ENST00000482996 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
VARS-225ENST00000482996 SOS2Q07890 1332 aaPredicted RBP20.05■□□□□ 0.8
VARS-225ENST00000482996 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
VARS-225ENST00000482996 NUTM2EB1AL46 878 aaPredicted RBP20.04■□□□□ 0.8
VARS-225ENST00000482996 NUTM2AQ8IVF1 878 aaPredicted RBP20.04■□□□□ 0.8
VARS-225ENST00000482996 RGS17Q9UGC6 210 aaPredicted RBP20.04■□□□□ 0.8
VARS-225ENST00000482996 FMN2Q9NZ56 1722 aa20.03■□□□□ 0.8
VARS-225ENST00000482996 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
VARS-225ENST00000482996 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
VARS-225ENST00000482996 LRP6O75581 1613 aa20.02■□□□□ 0.8
VARS-225ENST00000482996 FOXO3O43524 673 aa20.02■□□□□ 0.8
VARS-225ENST00000482996 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
VARS-225ENST00000482996 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
VARS-225ENST00000482996 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
VARS-225ENST00000482996 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
VARS-225ENST00000482996 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
VARS-225ENST00000482996 EIF3AQ14152 1382 aaKnown RBP19.98■□□□□ 0.79
VARS-225ENST00000482996 PHF8Q9UPP1 1060 aa19.98■□□□□ 0.79
VARS-225ENST00000482996 ADGRB2O60241 1585 aa19.98■□□□□ 0.79
VARS-225ENST00000482996 ANKARQ7Z5J8 1434 aa19.97■□□□□ 0.79
VARS-225ENST00000482996 XPCQ01831 940 aaPredicted RBP19.97■□□□□ 0.79
VARS-225ENST00000482996 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
VARS-225ENST00000482996 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
VARS-225ENST00000482996 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
VARS-225ENST00000482996 ZNF772Q68DY9 489 aaPredicted RBP19.96■□□□□ 0.79
VARS-225ENST00000482996 PXDNQ92626 1479 aa19.96■□□□□ 0.79
VARS-225ENST00000482996 WASLO00401 505 aaPredicted RBP19.95■□□□□ 0.78
VARS-225ENST00000482996 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
VARS-225ENST00000482996 PSME1Q06323 249 aa19.93■□□□□ 0.78
VARS-225ENST00000482996 KRT28Q7Z3Y7 464 aa19.93■□□□□ 0.78
VARS-225ENST00000482996 ADAMTS2O95450 1211 aa19.91■□□□□ 0.78
VARS-225ENST00000482996 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
VARS-225ENST00000482996 TULP4Q9NRJ4 1543 aa19.91■□□□□ 0.78
VARS-225ENST00000482996 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
VARS-225ENST00000482996 PMFBP1Q8TBY8 1022 aa19.9■□□□□ 0.78
VARS-225ENST00000482996 AFF2P51816 1311 aa19.9■□□□□ 0.78
VARS-225ENST00000482996 SPATA31A3Q5VYP0 1347 aa19.9■□□□□ 0.78
VARS-225ENST00000482996 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
VARS-225ENST00000482996 COL22A1Q8NFW1 1626 aaPredicted RBP19.88■□□□□ 0.77
VARS-225ENST00000482996 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
VARS-225ENST00000482996 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
VARS-225ENST00000482996 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
VARS-225ENST00000482996 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
VARS-225ENST00000482996 CDK19Q9BWU1 502 aa19.87■□□□□ 0.77
VARS-225ENST00000482996 SBNO1A3KN83 1393 aa19.86■□□□□ 0.77
VARS-225ENST00000482996 ROCK2O75116 1388 aaKnown RBP19.86■□□□□ 0.77
VARS-225ENST00000482996 NUDT16Q96DE0 195 aaKnown RBP19.86■□□□□ 0.77
VARS-225ENST00000482996 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
VARS-225ENST00000482996 GPRASP1Q5JY77 1395 aa19.85■□□□□ 0.77
VARS-225ENST00000482996 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
VARS-225ENST00000482996 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
VARS-225ENST00000482996 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
VARS-225ENST00000482996 ARHGEF10O15013 1369 aa19.83■□□□□ 0.77
VARS-225ENST00000482996 RXRBP28702 533 aa19.83■□□□□ 0.77
VARS-225ENST00000482996 ATP7BP35670 1465 aa19.82■□□□□ 0.76
VARS-225ENST00000482996 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
VARS-225ENST00000482996 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
VARS-225ENST00000482996 QTRT2Q9H974 415 aaKnown RBP19.81■□□□□ 0.76
VARS-225ENST00000482996 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
VARS-225ENST00000482996 ITSN1Q15811 1721 aa19.8■□□□□ 0.76
VARS-225ENST00000482996 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
VARS-225ENST00000482996 USP21Q9UK80 565 aa19.8■□□□□ 0.76
VARS-225ENST00000482996 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
VARS-225ENST00000482996 PAK3O75914 559 aaPredicted RBP19.77■□□□□ 0.76
VARS-225ENST00000482996 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
VARS-225ENST00000482996 RBM6P78332 1123 aaKnown RBP19.77■□□□□ 0.76
VARS-225ENST00000482996 QRICH2Q9H0J4 1663 aa19.77■□□□□ 0.76
VARS-225ENST00000482996 PLEKHG3A1L390 1219 aa19.76■□□□□ 0.75
VARS-225ENST00000482996 CABLES1Q8TDN4 633 aa19.76■□□□□ 0.75
VARS-225ENST00000482996 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
VARS-225ENST00000482996 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
VARS-225ENST00000482996 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
VARS-225ENST00000482996 CABP2Q9NPB3 220 aa19.75■□□□□ 0.75
VARS-225ENST00000482996 CDK12Q9NYV4 1490 aaPredicted RBP19.74■□□□□ 0.75
VARS-225ENST00000482996 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
VARS-225ENST00000482996 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
VARS-225ENST00000482996 ACEP12821 1306 aa19.74■□□□□ 0.75
VARS-225ENST00000482996 MARF1Q9Y4F3 1742 aaKnown RBP19.73■□□□□ 0.75
VARS-225ENST00000482996 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
VARS-225ENST00000482996 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
VARS-225ENST00000482996 TOPAZ1Q8N9V7 1692 aa19.72■□□□□ 0.75
VARS-225ENST00000482996 PPIP5K1Q6PFW1 1433 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms