RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 JCADQ9P266 1359 aa24.03■■□□□ 1.44
VAMP4-204ENST00000482519 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
VAMP4-204ENST00000482519 NUTM2FA1L443 756 aa24.01■■□□□ 1.43
VAMP4-204ENST00000482519 ORAI2Q96SN7 254 aa24.01■■□□□ 1.43
VAMP4-204ENST00000482519 PRAM1Q96QH2 718 aa24■■□□□ 1.43
VAMP4-204ENST00000482519 POGKQ9P215 609 aa24■■□□□ 1.43
VAMP4-204ENST00000482519 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
VAMP4-204ENST00000482519 SIN3AQ96ST3 1273 aa23.99■■□□□ 1.43
VAMP4-204ENST00000482519 TRAK1Q9UPV9 953 aa23.99■■□□□ 1.43
VAMP4-204ENST00000482519 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
VAMP4-204ENST00000482519 SIRT1Q96EB6 747 aa23.98■■□□□ 1.43
VAMP4-204ENST00000482519 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
VAMP4-204ENST00000482519 NHSL1Q5SYE7 1610 aa23.96■■□□□ 1.43
VAMP4-204ENST00000482519 ADGRB1O14514 1584 aa23.96■■□□□ 1.43
VAMP4-204ENST00000482519 LRRC59Q96AG4 307 aaKnown RBP23.93■■□□□ 1.42
VAMP4-204ENST00000482519 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
VAMP4-204ENST00000482519 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
VAMP4-204ENST00000482519 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
VAMP4-204ENST00000482519 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
VAMP4-204ENST00000482519 DLC1Q96QB1 1528 aa23.91■■□□□ 1.42
VAMP4-204ENST00000482519 MEX3CQ5U5Q3 659 aaKnown RBP23.91■■□□□ 1.42
VAMP4-204ENST00000482519 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
VAMP4-204ENST00000482519 SHPRHQ149N8 1683 aa23.9■■□□□ 1.42
VAMP4-204ENST00000482519 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.41
VAMP4-204ENST00000482519 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
VAMP4-204ENST00000482519 MINK1Q8N4C8 1332 aaPredicted RBP23.88■■□□□ 1.41
VAMP4-204ENST00000482519 FOXO3O43524 673 aa23.88■■□□□ 1.41
VAMP4-204ENST00000482519 RGS17Q9UGC6 210 aaPredicted RBP23.88■■□□□ 1.41
VAMP4-204ENST00000482519 XPCQ01831 940 aaPredicted RBP23.87■■□□□ 1.41
VAMP4-204ENST00000482519 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
VAMP4-204ENST00000482519 LRP6O75581 1613 aa23.85■■□□□ 1.41
VAMP4-204ENST00000482519 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
VAMP4-204ENST00000482519 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
VAMP4-204ENST00000482519 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.41
VAMP4-204ENST00000482519 KIAA1210Q9ULL0 1709 aa23.83■■□□□ 1.41
VAMP4-204ENST00000482519 PNPLA6Q8IY17 1366 aa23.82■■□□□ 1.4
VAMP4-204ENST00000482519 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
VAMP4-204ENST00000482519 SOCS7O14512 581 aa23.8■■□□□ 1.4
VAMP4-204ENST00000482519 PHF8Q9UPP1 1060 aa23.8■■□□□ 1.4
VAMP4-204ENST00000482519 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
VAMP4-204ENST00000482519 PXDNQ92626 1479 aa23.78■■□□□ 1.4
VAMP4-204ENST00000482519 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
VAMP4-204ENST00000482519 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
VAMP4-204ENST00000482519 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
VAMP4-204ENST00000482519 ADAMTS2O95450 1211 aa23.76■■□□□ 1.39
VAMP4-204ENST00000482519 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
VAMP4-204ENST00000482519 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
VAMP4-204ENST00000482519 PSME1Q06323 249 aa23.74■■□□□ 1.39
VAMP4-204ENST00000482519 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
VAMP4-204ENST00000482519 ANKARQ7Z5J8 1434 aa23.74■■□□□ 1.39
VAMP4-204ENST00000482519 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
VAMP4-204ENST00000482519 EIF3AQ14152 1382 aaKnown RBP23.73■■□□□ 1.39
VAMP4-204ENST00000482519 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
VAMP4-204ENST00000482519 PRR36Q9H6K5 1346 aa23.71■■□□□ 1.39
VAMP4-204ENST00000482519 ZNF772Q68DY9 489 aaPredicted RBP23.71■■□□□ 1.39
VAMP4-204ENST00000482519 CDK19Q9BWU1 502 aa23.71■■□□□ 1.39
VAMP4-204ENST00000482519 TULP4Q9NRJ4 1543 aa23.7■■□□□ 1.38
VAMP4-204ENST00000482519 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
VAMP4-204ENST00000482519 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
VAMP4-204ENST00000482519 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
VAMP4-204ENST00000482519 TRPM1Q7Z4N2 1603 aa23.7■■□□□ 1.38
VAMP4-204ENST00000482519 ROCK2O75116 1388 aaKnown RBP23.69■■□□□ 1.38
VAMP4-204ENST00000482519 AFF2P51816 1311 aa23.69■■□□□ 1.38
VAMP4-204ENST00000482519 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
VAMP4-204ENST00000482519 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
VAMP4-204ENST00000482519 SPATA31A3Q5VYP0 1347 aa23.68■■□□□ 1.38
VAMP4-204ENST00000482519 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
VAMP4-204ENST00000482519 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
VAMP4-204ENST00000482519 COL22A1Q8NFW1 1626 aaPredicted RBP23.67■■□□□ 1.38
VAMP4-204ENST00000482519 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
VAMP4-204ENST00000482519 SRPK2P78362 688 aaKnown RBP23.64■■□□□ 1.37
VAMP4-204ENST00000482519 GPRASP1Q5JY77 1395 aa23.64■■□□□ 1.37
VAMP4-204ENST00000482519 HAP1P54257 671 aaPredicted RBP23.63■■□□□ 1.37
VAMP4-204ENST00000482519 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
VAMP4-204ENST00000482519 QRICH2Q9H0J4 1663 aa23.63■■□□□ 1.37
VAMP4-204ENST00000482519 ATP7BP35670 1465 aa23.62■■□□□ 1.37
VAMP4-204ENST00000482519 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
VAMP4-204ENST00000482519 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
VAMP4-204ENST00000482519 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
VAMP4-204ENST00000482519 CABLES1Q8TDN4 633 aa23.6■■□□□ 1.37
VAMP4-204ENST00000482519 CABP2Q9NPB3 220 aa23.6■■□□□ 1.37
VAMP4-204ENST00000482519 RXRBP28702 533 aa23.59■■□□□ 1.37
VAMP4-204ENST00000482519 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
VAMP4-204ENST00000482519 CARD11Q9BXL7 1154 aa23.58■■□□□ 1.37
VAMP4-204ENST00000482519 USP21Q9UK80 565 aa23.58■■□□□ 1.37
VAMP4-204ENST00000482519 CCDC61Q9Y6R9 512 aa23.58■■□□□ 1.37
VAMP4-204ENST00000482519 ARHGEF10O15013 1369 aa23.57■■□□□ 1.36
VAMP4-204ENST00000482519 MARF1Q9Y4F3 1742 aaKnown RBP23.55■■□□□ 1.36
VAMP4-204ENST00000482519 TRPM3Q9HCF6 1732 aaPredicted RBP23.54■■□□□ 1.36
VAMP4-204ENST00000482519 ACEP12821 1306 aa23.54■■□□□ 1.36
VAMP4-204ENST00000482519 EVC2Q86UK5 1308 aa23.54■■□□□ 1.36
VAMP4-204ENST00000482519 FNBP4Q8N3X1 1017 aaPredicted RBP23.53■■□□□ 1.36
VAMP4-204ENST00000482519 TOPAZ1Q8N9V7 1692 aa23.53■■□□□ 1.36
VAMP4-204ENST00000482519 PPIP5K1Q6PFW1 1433 aa23.51■■□□□ 1.35
VAMP4-204ENST00000482519 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
VAMP4-204ENST00000482519 PLEKHG3A1L390 1219 aa23.51■■□□□ 1.35
VAMP4-204ENST00000482519 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
VAMP4-204ENST00000482519 ALS2Q96Q42 1657 aa23.49■■□□□ 1.35
VAMP4-204ENST00000482519 TRPC5Q9UL62 973 aaPredicted RBP23.49■■□□□ 1.35
VAMP4-204ENST00000482519 POLR3AO14802 1390 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms