RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 RABEP1Q15276 862 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
DDX39B-219ENST00000481456 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 IGHDP01880 384 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
DDX39B-219ENST00000481456 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
DDX39B-219ENST00000481456 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
DDX39B-219ENST00000481456 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
DDX39B-219ENST00000481456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX39B-219ENST00000481456 TBC1D32Q96NH3 1257 aa14.12□□□□□ -0.15
DDX39B-219ENST00000481456 GCC2Q8IWJ2 1684 aa14.12□□□□□ -0.15
DDX39B-219ENST00000481456 ATF7IPQ6VMQ6 1270 aa14.12□□□□□ -0.15
DDX39B-219ENST00000481456 KIF14Q15058 1648 aa14.12□□□□□ -0.15
DDX39B-219ENST00000481456 GNAI1P63096 354 aa14.11□□□□□ -0.15
DDX39B-219ENST00000481456 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
DDX39B-219ENST00000481456 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
DDX39B-219ENST00000481456 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
DDX39B-219ENST00000481456 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
DDX39B-219ENST00000481456 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
DDX39B-219ENST00000481456 MBD3O95983 291 aa14.1□□□□□ -0.15
DDX39B-219ENST00000481456 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
DDX39B-219ENST00000481456 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
DDX39B-219ENST00000481456 SPATA31E1Q6ZUB1 1445 aa14.1□□□□□ -0.15
DDX39B-219ENST00000481456 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
DDX39B-219ENST00000481456 URB2Q14146 1524 aaKnown RBP14.09□□□□□ -0.15
DDX39B-219ENST00000481456 FOXD4L6Q3SYB3 417 aaPredicted RBP14.09□□□□□ -0.15
DDX39B-219ENST00000481456 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
DDX39B-219ENST00000481456 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
DDX39B-219ENST00000481456 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.15
DDX39B-219ENST00000481456 ZSCAN30Q86W11 494 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 UHRF1BP1Q6BDS2 1440 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 ITSN2Q9NZM3 1697 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 SOX12O15370 315 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 GPATCH8Q9UKJ3 1502 aaKnown RBP14.08□□□□□ -0.16
DDX39B-219ENST00000481456 CLCN1P35523 988 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
DDX39B-219ENST00000481456 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
DDX39B-219ENST00000481456 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
DDX39B-219ENST00000481456 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
DDX39B-219ENST00000481456 PZPP20742 1482 aa14.07□□□□□ -0.16
DDX39B-219ENST00000481456 INSRP06213 1382 aa14.07□□□□□ -0.16
DDX39B-219ENST00000481456 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
DDX39B-219ENST00000481456 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
DDX39B-219ENST00000481456 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
DDX39B-219ENST00000481456 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
DDX39B-219ENST00000481456 RBM10P98175 930 aaKnown RBP14.06□□□□□ -0.16
DDX39B-219ENST00000481456 PLB1Q6P1J6 1458 aa14.06□□□□□ -0.16
DDX39B-219ENST00000481456 SLC12A5Q9H2X9 1139 aa14.06□□□□□ -0.16
DDX39B-219ENST00000481456 NAP1L2Q9ULW6 460 aaPredicted RBP14.06□□□□□ -0.16
DDX39B-219ENST00000481456 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.161e-69■□□□□ 8.2
DDX39B-219ENST00000481456 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
DDX39B-219ENST00000481456 ZMYM4Q5VZL5 1548 aa14.05□□□□□ -0.16
DDX39B-219ENST00000481456 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
DDX39B-219ENST00000481456 RNF214Q8ND24 703 aa14.05□□□□□ -0.16
DDX39B-219ENST00000481456 TSPY26PQ9H489 355 aa14.05□□□□□ -0.16
DDX39B-219ENST00000481456 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
DDX39B-219ENST00000481456 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
DDX39B-219ENST00000481456 CABP2Q9NPB3 220 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 WDR62O43379 1518 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
DDX39B-219ENST00000481456 MCM2P49736 904 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 NUP160Q12769 1436 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 COG3Q96JB2 828 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 BLMP54132 1417 aaPredicted RBP14.03□□□□□ -0.16
DDX39B-219ENST00000481456 TMEM132EQ6IEE7 984 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 TMEM57Q8N5G2 664 aa14.03□□□□□ -0.16
DDX39B-219ENST00000481456 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.16
DDX39B-219ENST00000481456 UQCRHLA0A096LP55 91 aa14.02□□□□□ -0.17
DDX39B-219ENST00000481456 UQCRHP07919 91 aa14.02□□□□□ -0.17
DDX39B-219ENST00000481456 HMGN5P82970 282 aaKnown RBP14.02□□□□□ -0.17
DDX39B-219ENST00000481456 SAMD9Q5K651 1589 aa14.02□□□□□ -0.17
DDX39B-219ENST00000481456 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-219ENST00000481456 DIAPH3Q9NSV4 1193 aa14.01□□□□□ -0.17
DDX39B-219ENST00000481456 LETM1O95202 739 aaPredicted RBP14.01□□□□□ -0.17
DDX39B-219ENST00000481456 ZNF428Q96B54 188 aa14.01□□□□□ -0.17
DDX39B-219ENST00000481456 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
DDX39B-219ENST00000481456 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
DDX39B-219ENST00000481456 TPM4P67936 248 aa14.01□□□□□ -0.17
DDX39B-219ENST00000481456 COL17A1Q9UMD9 1497 aaPredicted RBP14□□□□□ -0.17
DDX39B-219ENST00000481456 TPM3P06753 285 aa14□□□□□ -0.17
DDX39B-219ENST00000481456 HMOX1P09601 288 aa14□□□□□ -0.17
DDX39B-219ENST00000481456 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
DDX39B-219ENST00000481456 PDCL3Q9H2J4 239 aa14□□□□□ -0.17
DDX39B-219ENST00000481456 LMOD2Q6P5Q4 547 aa14□□□□□ -0.17
DDX39B-219ENST00000481456 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 NEK4P51957 841 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 TESK2Q96S53 571 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 PIK3C2GO75747 1445 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 ZNF771Q7L3S4 317 aaPredicted RBP13.99□□□□□ -0.17
DDX39B-219ENST00000481456 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
DDX39B-219ENST00000481456 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
DDX39B-219ENST00000481456 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms