RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ADGRB1O14514 1584 aa29.18■■■□□ 2.26
VPS36-204ENST00000480923 SIN3AQ96ST3 1273 aa29.17■■■□□ 2.26
VPS36-204ENST00000480923 CDC42BPGQ6DT37 1551 aa29.17■■■□□ 2.26
VPS36-204ENST00000480923 PRAM1Q96QH2 718 aa29.16■■■□□ 2.26
VPS36-204ENST00000480923 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
VPS36-204ENST00000480923 POGKQ9P215 609 aa29.15■■■□□ 2.26
VPS36-204ENST00000480923 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
VPS36-204ENST00000480923 NEUROD1Q13562 356 aa29.14■■■□□ 2.26
VPS36-204ENST00000480923 SAFB2Q14151 953 aaKnown RBP eCLIP29.14■■■□□ 2.26
VPS36-204ENST00000480923 DDX17Q92841 729 aaKnown RBP29.13■■■□□ 2.25
VPS36-204ENST00000480923 DLC1Q96QB1 1528 aa29.12■■■□□ 2.25
VPS36-204ENST00000480923 NUTM2FA1L443 756 aa29.11■■■□□ 2.25
VPS36-204ENST00000480923 ILDR2Q71H61 639 aa29.11■■■□□ 2.25
VPS36-204ENST00000480923 ESCO1Q5FWF5 840 aa29.09■■■□□ 2.25
VPS36-204ENST00000480923 L3MBTL2Q969R5 705 aa29.09■■■□□ 2.25
VPS36-204ENST00000480923 NHSL1Q5SYE7 1610 aa29.09■■■□□ 2.25
VPS36-204ENST00000480923 LRRC59Q96AG4 307 aaKnown RBP29.06■■■□□ 2.24
VPS36-204ENST00000480923 SPATA31A6Q5VVP1 1343 aa29.04■■■□□ 2.24
VPS36-204ENST00000480923 FMN2Q9NZ56 1722 aa29.01■■■□□ 2.23
VPS36-204ENST00000480923 MINK1Q8N4C8 1332 aaPredicted RBP29■■■□□ 2.23
VPS36-204ENST00000480923 NBPF1Q3BBV0 1214 aa29■■■□□ 2.23
VPS36-204ENST00000480923 HIRIP3Q9BW71 556 aaPredicted RBP29■■■□□ 2.23
VPS36-204ENST00000480923 SHPRHQ149N8 1683 aa28.99■■■□□ 2.23
VPS36-204ENST00000480923 SOS2Q07890 1332 aaPredicted RBP28.99■■■□□ 2.23
VPS36-204ENST00000480923 NPHP3Q7Z494 1330 aa28.99■■■□□ 2.23
VPS36-204ENST00000480923 KIAA1210Q9ULL0 1709 aa28.99■■■□□ 2.23
VPS36-204ENST00000480923 NUTM2BA6NNL0 878 aaPredicted RBP28.97■■■□□ 2.23
VPS36-204ENST00000480923 NUTM2EB1AL46 878 aaPredicted RBP28.97■■■□□ 2.23
VPS36-204ENST00000480923 FOXO3O43524 673 aa28.97■■■□□ 2.23
VPS36-204ENST00000480923 MEX3CQ5U5Q3 659 aaKnown RBP28.97■■■□□ 2.23
VPS36-204ENST00000480923 NUTM2AQ8IVF1 878 aaPredicted RBP28.97■■■□□ 2.23
VPS36-204ENST00000480923 LRP6O75581 1613 aa28.95■■■□□ 2.23
VPS36-204ENST00000480923 PNPLA6Q8IY17 1366 aa28.95■■■□□ 2.22
VPS36-204ENST00000480923 ADGRB2O60241 1585 aa28.95■■■□□ 2.22
VPS36-204ENST00000480923 XPCQ01831 940 aaPredicted RBP28.94■■■□□ 2.22
VPS36-204ENST00000480923 RGS17Q9UGC6 210 aaPredicted RBP28.94■■■□□ 2.22
VPS36-204ENST00000480923 ARHGEF28Q8N1W1 1705 aaKnown RBP28.92■■■□□ 2.22
VPS36-204ENST00000480923 PHF8Q9UPP1 1060 aa28.92■■■□□ 2.22
VPS36-204ENST00000480923 TONSLQ96HA7 1378 aa28.9■■■□□ 2.22
VPS36-204ENST00000480923 WASLO00401 505 aaPredicted RBP28.9■■■□□ 2.22
VPS36-204ENST00000480923 ANKARQ7Z5J8 1434 aa28.9■■■□□ 2.22
VPS36-204ENST00000480923 EIF3AQ14152 1382 aaKnown RBP28.89■■■□□ 2.22
VPS36-204ENST00000480923 PXDNQ92626 1479 aa28.89■■■□□ 2.22
VPS36-204ENST00000480923 KIF1AQ12756 1690 aa28.89■■■□□ 2.21
VPS36-204ENST00000480923 PCGF6Q9BYE7 350 aa28.86■■■□□ 2.21
VPS36-204ENST00000480923 KRT28Q7Z3Y7 464 aa28.85■■■□□ 2.21
VPS36-204ENST00000480923 PMFBP1Q8TBY8 1022 aa28.85■■■□□ 2.21
VPS36-204ENST00000480923 TULP4Q9NRJ4 1543 aa28.84■■■□□ 2.21
VPS36-204ENST00000480923 ROCK2O75116 1388 aaKnown RBP28.84■■■□□ 2.21
VPS36-204ENST00000480923 USP32Q8NFA0 1604 aa28.83■■■□□ 2.21
VPS36-204ENST00000480923 PRR36Q9H6K5 1346 aa28.83■■■□□ 2.21
VPS36-204ENST00000480923 CENPJQ9HC77 1338 aaPredicted RBP28.83■■■□□ 2.21
VPS36-204ENST00000480923 RGPD8O14715 1765 aaPredicted RBP28.83■■■□□ 2.21
VPS36-204ENST00000480923 NBPF8Q3BBV2 869 aa28.82■■■□□ 2.2
VPS36-204ENST00000480923 POTEAQ6S8J7 498 aa28.82■■■□□ 2.2
VPS36-204ENST00000480923 TRPM1Q7Z4N2 1603 aa28.82■■■□□ 2.2
VPS36-204ENST00000480923 SOCS7O14512 581 aa28.81■■■□□ 2.2
VPS36-204ENST00000480923 PSME1Q06323 249 aa28.81■■■□□ 2.2
VPS36-204ENST00000480923 CDK19Q9BWU1 502 aa28.8■■■□□ 2.2
VPS36-204ENST00000480923 ADAMTS2O95450 1211 aa28.79■■■□□ 2.2
VPS36-204ENST00000480923 SPATA31A3Q5VYP0 1347 aa28.78■■■□□ 2.2
VPS36-204ENST00000480923 ZNF772Q68DY9 489 aaPredicted RBP28.77■■■□□ 2.2
VPS36-204ENST00000480923 NUDT16Q96DE0 195 aaKnown RBP28.77■■■□□ 2.2
VPS36-204ENST00000480923 C8orf37Q96NL8 207 aa28.77■■■□□ 2.2
VPS36-204ENST00000480923 COL22A1Q8NFW1 1626 aaPredicted RBP28.75■■■□□ 2.19
VPS36-204ENST00000480923 AFF2P51816 1311 aa28.74■■■□□ 2.19
VPS36-204ENST00000480923 ATP7BP35670 1465 aa28.74■■■□□ 2.19
VPS36-204ENST00000480923 NGDNQ8NEJ9 315 aaKnown RBP28.74■■■□□ 2.19
VPS36-204ENST00000480923 TNS3Q68CZ2 1445 aa28.73■■■□□ 2.19
VPS36-204ENST00000480923 GPRASP1Q5JY77 1395 aa28.73■■■□□ 2.19
VPS36-204ENST00000480923 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
VPS36-204ENST00000480923 SBNO1A3KN83 1393 aa28.72■■■□□ 2.19
VPS36-204ENST00000480923 SRPK2P78362 688 aaKnown RBP28.71■■■□□ 2.19
VPS36-204ENST00000480923 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
VPS36-204ENST00000480923 CARD11Q9BXL7 1154 aa28.69■■■□□ 2.18
VPS36-204ENST00000480923 QRICH2Q9H0J4 1663 aa28.69■■■□□ 2.18
VPS36-204ENST00000480923 CCDC61Q9Y6R9 512 aa28.68■■■□□ 2.18
VPS36-204ENST00000480923 PLEKHG5O94827 1062 aa28.67■■■□□ 2.18
VPS36-204ENST00000480923 CABP2Q9NPB3 220 aa28.67■■■□□ 2.18
VPS36-204ENST00000480923 RALGAPBQ86X10 1494 aa28.66■■■□□ 2.18
VPS36-204ENST00000480923 ARHGEF10O15013 1369 aa28.66■■■□□ 2.18
VPS36-204ENST00000480923 ITSN1Q15811 1721 aa28.66■■■□□ 2.18
VPS36-204ENST00000480923 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
VPS36-204ENST00000480923 PAK3O75914 559 aaPredicted RBP28.63■■■□□ 2.17
VPS36-204ENST00000480923 EVC2Q86UK5 1308 aa28.63■■■□□ 2.17
VPS36-204ENST00000480923 CABLES1Q8TDN4 633 aa28.62■■■□□ 2.17
VPS36-204ENST00000480923 PLEKHG3A1L390 1219 aa28.61■■■□□ 2.17
VPS36-204ENST00000480923 ACEP12821 1306 aa28.61■■■□□ 2.17
VPS36-204ENST00000480923 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
VPS36-204ENST00000480923 RXRBP28702 533 aa28.6■■■□□ 2.17
VPS36-204ENST00000480923 USP21Q9UK80 565 aa28.6■■■□□ 2.17
VPS36-204ENST00000480923 TOPAZ1Q8N9V7 1692 aa28.6■■■□□ 2.17
VPS36-204ENST00000480923 TRPM3Q9HCF6 1732 aaPredicted RBP28.6■■■□□ 2.17
VPS36-204ENST00000480923 QTRT2Q9H974 415 aaKnown RBP28.59■■■□□ 2.17
VPS36-204ENST00000480923 POLR3AO14802 1390 aaPredicted RBP28.59■■■□□ 2.17
VPS36-204ENST00000480923 PPIP5K1Q6PFW1 1433 aa28.59■■■□□ 2.17
VPS36-204ENST00000480923 FNBP4Q8N3X1 1017 aaPredicted RBP28.58■■■□□ 2.17
VPS36-204ENST00000480923 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
VPS36-204ENST00000480923 CABP1Q9NZU7 370 aa28.54■■■□□ 2.16
VPS36-204ENST00000480923 ALS2Q96Q42 1657 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms