RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 FMN2Q9NZ56 1722 aa12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-208ENST00000480209 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
NUDCD3-208ENST00000480209 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUDCD3-208ENST00000480209 CDC42BPGQ6DT37 1551 aa12.63□□□□□ -0.39
NUDCD3-208ENST00000480209 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-208ENST00000480209 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
NUDCD3-208ENST00000480209 LRRC7Q96NW7 1537 aa12.61□□□□□ -0.39
NUDCD3-208ENST00000480209 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-208ENST00000480209 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
NUDCD3-208ENST00000480209 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-208ENST00000480209 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
NUDCD3-208ENST00000480209 SIRT1Q96EB6 747 aa12.59□□□□□ -0.39
NUDCD3-208ENST00000480209 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-208ENST00000480209 ADGRL3Q9HAR2 1447 aa12.59□□□□□ -0.39
NUDCD3-208ENST00000480209 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
NUDCD3-208ENST00000480209 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
NUDCD3-208ENST00000480209 POGKQ9P215 609 aa12.58□□□□□ -0.4
NUDCD3-208ENST00000480209 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
NUDCD3-208ENST00000480209 ATP7BP35670 1465 aa12.57□□□□□ -0.4
NUDCD3-208ENST00000480209 MSH5O43196 834 aa12.56□□□□□ -0.4
NUDCD3-208ENST00000480209 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
NUDCD3-208ENST00000480209 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
NUDCD3-208ENST00000480209 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
NUDCD3-208ENST00000480209 TMF1P82094 1093 aa12.54□□□□□ -0.4
NUDCD3-208ENST00000480209 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
NUDCD3-208ENST00000480209 PRR36Q9H6K5 1346 aa12.53□□□□□ -0.4
NUDCD3-208ENST00000480209 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
NUDCD3-208ENST00000480209 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-208ENST00000480209 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
NUDCD3-208ENST00000480209 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
NUDCD3-208ENST00000480209 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
NUDCD3-208ENST00000480209 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-208ENST00000480209 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
NUDCD3-208ENST00000480209 DCCP43146 1447 aa12.51□□□□□ -0.41
NUDCD3-208ENST00000480209 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
NUDCD3-208ENST00000480209 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
NUDCD3-208ENST00000480209 MST1RQ04912 1400 aa12.49□□□□□ -0.41
NUDCD3-208ENST00000480209 ANKARQ7Z5J8 1434 aa12.49□□□□□ -0.41
NUDCD3-208ENST00000480209 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
NUDCD3-208ENST00000480209 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
NUDCD3-208ENST00000480209 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-208ENST00000480209 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
NUDCD3-208ENST00000480209 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
NUDCD3-208ENST00000480209 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
NUDCD3-208ENST00000480209 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.41
NUDCD3-208ENST00000480209 MSH6P52701 1360 aa12.46□□□□□ -0.41
NUDCD3-208ENST00000480209 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-208ENST00000480209 C14orf37Q86TY3 774 aa12.46□□□□□ -0.41
NUDCD3-208ENST00000480209 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
NUDCD3-208ENST00000480209 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-208ENST00000480209 PUS7Q96PZ0 661 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-208ENST00000480209 TRPM3Q9HCF6 1732 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-208ENST00000480209 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-208ENST00000480209 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 C19orf44Q9H6X5 657 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
NUDCD3-208ENST00000480209 NINLQ9Y2I6 1382 aa12.43□□□□□ -0.42
NUDCD3-208ENST00000480209 ROBO1Q9Y6N7 1651 aa12.43□□□□□ -0.42
NUDCD3-208ENST00000480209 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
NUDCD3-208ENST00000480209 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
NUDCD3-208ENST00000480209 IQSEC2Q5JU85 1478 aa12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-208ENST00000480209 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
NUDCD3-208ENST00000480209 PANK3Q9H999 370 aa12.4□□□□□ -0.42
NUDCD3-208ENST00000480209 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
NUDCD3-208ENST00000480209 ALS2Q96Q42 1657 aa12.4□□□□□ -0.42
NUDCD3-208ENST00000480209 USP6P35125 1406 aa12.39□□□□□ -0.43
NUDCD3-208ENST00000480209 ATF3P18847 181 aa12.39□□□□□ -0.43
NUDCD3-208ENST00000480209 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
NUDCD3-208ENST00000480209 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
NUDCD3-208ENST00000480209 ACEP12821 1306 aa12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 PXDNQ92626 1479 aa12.38□□□□□ -0.43
NUDCD3-208ENST00000480209 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
NUDCD3-208ENST00000480209 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
NUDCD3-208ENST00000480209 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-208ENST00000480209 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
NUDCD3-208ENST00000480209 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-208ENST00000480209 ESCO1Q5FWF5 840 aa12.36□□□□□ -0.43
NUDCD3-208ENST00000480209 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-208ENST00000480209 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-208ENST00000480209 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
NUDCD3-208ENST00000480209 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms